FFCP PHASE1:Mm9::chr9:91256536..91256556,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=819|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:91256536..91256556,-|id=chr9:91256536..91256556,-|ontology_enrichment_celltype=CL:0000117!2.86e-17!23;CL:0000337!2.86e-17!23;CL:0002319!2.31e-13!43;CL:0000221!7.63e-13!44;CL:0000133!7.63e-13!44;CL:0000055!3.35e-10!50;CL:0000540!7.43e-10!33;CL:0000047!7.43e-10!33;CL:0000031!7.43e-10!33;CL:0000404!7.43e-10!33;CL:0000393!2.45e-07!39;CL:0000211!2.45e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.44e-27,23;CL:0000337,1.44e-27,23;CL:0002319,1.43e-22,43;CL:0000221,5.71e-22,44;CL:0000133,5.71e-22,44;CL:0000540,2.79e-18,33;CL:0000047,2.79e-18,33;CL:0000031,2.79e-18,33;CL:0000404,2.79e-18,33;CL:0000393,5.40e-15,39;CL:0000211,5.40e-15,39;CL:0002321,2.37e-12,70;CL:0002613,4.25e-11,3;CL:0002612,2.49e-10,3;CL:0000120,4.74e-10,3;CL:0002610,6.88e-09,3;CL:0000723,2.00e-07,91;CL:0000048,2.00e-07,91;CL:0000708,4.60e-07,2;CL:0002611,6.09e-07,2;CL:0000034,9.66e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.72e-26!73;UBERON:0005743!4.72e-26!73;UBERON:0000073!6.38e-26!75;UBERON:0001016!6.38e-26!75;UBERON:0000033!1.18e-24!63;UBERON:0001049!4.32e-24!52;UBERON:0005068!4.32e-24!52;UBERON:0006241!4.32e-24!52;UBERON:0007135!4.32e-24!52;UBERON:0000955!4.14e-23!50;UBERON:0006238!4.14e-23!50;UBERON:0002616!1.67e-22!49;UBERON:0002346!3.86e-22!71;UBERON:0003075!3.86e-22!71;UBERON:0007284!3.86e-22!71;UBERON:0004121!9.45e-22!102;UBERON:0000924!9.45e-22!102;UBERON:0006601!9.45e-22!102;UBERON:0003056!3.97e-20!49;UBERON:0003080!3.94e-16!40;UBERON:0002020!5.90e-16!34;UBERON:0002780!1.38e-15!39;UBERON:0001890!1.38e-15!39;UBERON:0006240!1.38e-15!39;UBERON:0007811!8.83e-15!86;UBERON:0000153!4.70e-13!94;UBERON:0002791!2.35e-11!29;UBERON:0003528!2.35e-11!29;UBERON:0001893!2.35e-11!29;UBERON:0003076!8.58e-09!12;UBERON:0003057!8.58e-09!12;UBERON:0002420!1.92e-08!8;UBERON:0007245!1.92e-08!8;UBERON:0010009!1.92e-08!8;UBERON:0010011!1.92e-08!8;UBERON:0000454!1.92e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.10e-20,73;UBERON:0001016,9.77e-20,75;UBERON:0000073,2.86e-17,54;UBERON:0003076,2.49e-16,12;UBERON:0003057,2.49e-16,12;UBERON:0001948,1.23e-15,5;UBERON:0002315,1.23e-15,5;UBERON:0004121,1.37e-14,95;UBERON:0000924,1.37e-14,95;UBERON:0006601,1.37e-14,95;UBERON:0002240,5.43e-13,6;UBERON:0005174,5.43e-13,6;UBERON:0001137,5.43e-13,6;UBERON:0001049,1.26e-12,52;UBERON:0005068,1.26e-12,52;UBERON:0006241,1.26e-12,52;UBERON:0007135,1.26e-12,52;UBERON:0002257,2.49e-10,3;UBERON:0002346,1.24e-09,64;UBERON:0003075,1.24e-09,64;UBERON:0007284,1.24e-09,64;UBERON:0004684,6.88e-09,3;UBERON:0002275,6.88e-09,3;UBERON:0002037,2.05e-08,4;UBERON:0002680,2.05e-08,4;UBERON:0001895,2.05e-08,4;UBERON:0010092,2.05e-08,4;UBERON:0006215,2.05e-08,4;UBERON:0010371,4.89e-08,73;UBERON:0002020,1.01e-07,34;UBERON:0003210,4.60e-07,2;UBERON:0002256,6.09e-07,2;UBERON:0002420,7.27e-07,8;UBERON:0007245,7.27e-07,8;UBERON:0010009,7.27e-07,8;UBERON:0010011,7.27e-07,8;UBERON:0000454,7.27e-07,8;UBERON:0000369,8.49e-07,5;UBERON:0002435,8.49e-07,5;UBERON:0000204,8.49e-07,5;UBERON:0010082,8.49e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,0,0.659058548203415,2.13872888981712,2.2397827460058,0,0,0,0,0,0,0,2.63011399117477,4.23192783417626,1.26766280701236,1.35537812827653,2.66788438833342,0,0,0,0.599200221036809,1.92109152660777,0.311068836925433,0.270011876663381,0,1.99955689082663,1.54607978666129,0.122490799214954,0.191690942036473,0,1.10115880999389,1.27687338085188,1.22885226604995,4.61602007055678,9.5147149346506,4.68822033501084,1.67509799400829,0.56276261003168,0.45839474333043,1.76777151284201,3.13217697758026,2.79599168737951,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90508151931177,13.1951425292477,0,0,0,0,0.299581278809645,0.457500602818626,0.628271760564322,0.173824320192276,0,2.0778804455956,0.648965052271031,0,0,0,0,0.520481771850815,0.459804208866946,0.540186389416048,0.452114453507145,0.136072998302656,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.720332286654991,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,1.4229455216103,0.428674070063185,0.177340233642274,1.60531935841864,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0.665957860122194,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0.675022500231806,0.900642406448441,0.906284817968409,0,1.66059756134683,2.39414924040619,0.853668028770671,0.486213434136588,0.628839487883947,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.565879024158229,0.187283014939765,0,0.34461281373368,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.685738504770831,0.177475806159338,0.953744759789284,0.436039249896986,0.188218760830661,0.0846146078916765,0,0,0.543216455383447,1.68342681497322,0,0.197008964751127,0.818462086339379,0,0,0.249810577937946,0,0.644613162144895,0.956441660344217,0,0.231867835620421|short_description=p@chr9:91256536..91256556,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=819 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:91256536..91256556,- | |||
|id=chr9:91256536..91256556,- | |||
|ontology_enrichment_celltype=CL:0000117!2.86e-17!23;CL:0000337!2.86e-17!23;CL:0002319!2.31e-13!43;CL:0000221!7.63e-13!44;CL:0000133!7.63e-13!44;CL:0000055!3.35e-10!50;CL:0000540!7.43e-10!33;CL:0000047!7.43e-10!33;CL:0000031!7.43e-10!33;CL:0000404!7.43e-10!33;CL:0000393!2.45e-07!39;CL:0000211!2.45e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.44e-27,23;CL:0000337,1.44e-27,23;CL:0002319,1.43e-22,43;CL:0000221,5.71e-22,44;CL:0000133,5.71e-22,44;CL:0000540,2.79e-18,33;CL:0000047,2.79e-18,33;CL:0000031,2.79e-18,33;CL:0000404,2.79e-18,33;CL:0000393,5.40e-15,39;CL:0000211,5.40e-15,39;CL:0002321,2.37e-12,70;CL:0002613,4.25e-11,3;CL:0002612,2.49e-10,3;CL:0000120,4.74e-10,3;CL:0002610,6.88e-09,3;CL:0000723,2.00e-07,91;CL:0000048,2.00e-07,91;CL:0000708,4.60e-07,2;CL:0002611,6.09e-07,2;CL:0000034,9.66e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.72e-26!73;UBERON:0005743!4.72e-26!73;UBERON:0000073!6.38e-26!75;UBERON:0001016!6.38e-26!75;UBERON:0000033!1.18e-24!63;UBERON:0001049!4.32e-24!52;UBERON:0005068!4.32e-24!52;UBERON:0006241!4.32e-24!52;UBERON:0007135!4.32e-24!52;UBERON:0000955!4.14e-23!50;UBERON:0006238!4.14e-23!50;UBERON:0002616!1.67e-22!49;UBERON:0002346!3.86e-22!71;UBERON:0003075!3.86e-22!71;UBERON:0007284!3.86e-22!71;UBERON:0004121!9.45e-22!102;UBERON:0000924!9.45e-22!102;UBERON:0006601!9.45e-22!102;UBERON:0003056!3.97e-20!49;UBERON:0003080!3.94e-16!40;UBERON:0002020!5.90e-16!34;UBERON:0002780!1.38e-15!39;UBERON:0001890!1.38e-15!39;UBERON:0006240!1.38e-15!39;UBERON:0007811!8.83e-15!86;UBERON:0000153!4.70e-13!94;UBERON:0002791!2.35e-11!29;UBERON:0003528!2.35e-11!29;UBERON:0001893!2.35e-11!29;UBERON:0003076!8.58e-09!12;UBERON:0003057!8.58e-09!12;UBERON:0002420!1.92e-08!8;UBERON:0007245!1.92e-08!8;UBERON:0010009!1.92e-08!8;UBERON:0010011!1.92e-08!8;UBERON:0000454!1.92e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.10e-20,73;UBERON:0001016,9.77e-20,75;UBERON:0000073,2.86e-17,54;UBERON:0003076,2.49e-16,12;UBERON:0003057,2.49e-16,12;UBERON:0001948,1.23e-15,5;UBERON:0002315,1.23e-15,5;UBERON:0004121,1.37e-14,95;UBERON:0000924,1.37e-14,95;UBERON:0006601,1.37e-14,95;UBERON:0002240,5.43e-13,6;UBERON:0005174,5.43e-13,6;UBERON:0001137,5.43e-13,6;UBERON:0001049,1.26e-12,52;UBERON:0005068,1.26e-12,52;UBERON:0006241,1.26e-12,52;UBERON:0007135,1.26e-12,52;UBERON:0002257,2.49e-10,3;UBERON:0002346,1.24e-09,64;UBERON:0003075,1.24e-09,64;UBERON:0007284,1.24e-09,64;UBERON:0004684,6.88e-09,3;UBERON:0002275,6.88e-09,3;UBERON:0002037,2.05e-08,4;UBERON:0002680,2.05e-08,4;UBERON:0001895,2.05e-08,4;UBERON:0010092,2.05e-08,4;UBERON:0006215,2.05e-08,4;UBERON:0010371,4.89e-08,73;UBERON:0002020,1.01e-07,34;UBERON:0003210,4.60e-07,2;UBERON:0002256,6.09e-07,2;UBERON:0002420,7.27e-07,8;UBERON:0007245,7.27e-07,8;UBERON:0010009,7.27e-07,8;UBERON:0010011,7.27e-07,8;UBERON:0000454,7.27e-07,8;UBERON:0000369,8.49e-07,5;UBERON:0002435,8.49e-07,5;UBERON:0000204,8.49e-07,5;UBERON:0010082,8.49e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,0,0.659058548203415,2.13872888981712,2.2397827460058,0,0,0,0,0,0,0,2.63011399117477,4.23192783417626,1.26766280701236,1.35537812827653,2.66788438833342,0,0,0,0.599200221036809,1.92109152660777,0.311068836925433,0.270011876663381,0,1.99955689082663,1.54607978666129,0.122490799214954,0.191690942036473,0,1.10115880999389,1.27687338085188,1.22885226604995,4.61602007055678,9.5147149346506,4.68822033501084,1.67509799400829,0.56276261003168,0.45839474333043,1.76777151284201,3.13217697758026,2.79599168737951,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90508151931177,13.1951425292477,0,0,0,0,0.299581278809645,0.457500602818626,0.628271760564322,0.173824320192276,0,2.0778804455956,0.648965052271031,0,0,0,0,0.520481771850815,0.459804208866946,0.540186389416048,0.452114453507145,0.136072998302656,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.720332286654991,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,1.4229455216103,0.428674070063185,0.177340233642274,1.60531935841864,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0.665957860122194,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0.675022500231806,0.900642406448441,0.906284817968409,0,1.66059756134683,2.39414924040619,0.853668028770671,0.486213434136588,0.628839487883947,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.565879024158229,0.187283014939765,0,0.34461281373368,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.685738504770831,0.177475806159338,0.953744759789284,0.436039249896986,0.188218760830661,0.0846146078916765,0,0,0.543216455383447,1.68342681497322,0,0.197008964751127,0.818462086339379,0,0,0.249810577937946,0,0.644613162144895,0.956441660344217,0,0.231867835620421 | |||
|short_description=p@chr9:91256536..91256556,- | |||
}} |
Revision as of 18:58, 14 September 2013
Short description: | p@chr9:91256536..91256556, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:91256536..91256556, - |
Coexpression cluster: | MCL_coexpression_mm9:819 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.44e-27 | 23 |
neuroblast (sensu Vertebrata) | 1.44e-27 | 23 |
neural cell | 1.43e-22 | 43 |
ectodermal cell | 5.71e-22 | 44 |
neurectodermal cell | 5.71e-22 | 44 |
neuron | 2.79e-18 | 33 |
neuronal stem cell | 2.79e-18 | 33 |
neuroblast | 2.79e-18 | 33 |
electrically signaling cell | 2.79e-18 | 33 |
electrically responsive cell | 5.40e-15 | 39 |
electrically active cell | 5.40e-15 | 39 |
embryonic cell | 2.37e-12 | 70 |
striatum neuron | 4.25e-11 | 3 |
neuron of the ventral spinal cord | 2.49e-10 | 3 |
granule cell | 4.74e-10 | 3 |
raphe nuclei neuron | 6.88e-09 | 3 |
somatic stem cell | 2.00e-07 | 91 |
multi fate stem cell | 2.00e-07 | 91 |
leptomeningeal cell | 4.60e-07 | 2 |
neuron of the dorsal spinal cord | 6.09e-07 | 2 |
stem cell | 9.66e-07 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.