FFCP PHASE1:Hg19::chr1:11918990..11919013,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4879 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7940 | |||
|TSSclassifier=strong | |||
|UniProt=P16860 | |||
|association_with_transcript=0bp_to_NM_002521,uc001atj.2_5end | |||
|description=CAGE_peak_1_at_NPPB_5end | |||
|id=chr1:11918990..11919013,- | |||
|ontology_enrichment_celltype=CL:0000222!5.42e-18!119;CL:0000359!1.14e-17!32;CL:0000077!5.38e-16!19;CL:0000192!2.41e-12!42;CL:0000514!2.41e-12!42;CL:0000183!2.26e-11!59;CL:0000187!1.34e-10!54;CL:0000393!4.00e-10!60;CL:0000211!4.00e-10!60;CL:0000680!1.42e-09!57;CL:0000056!1.42e-09!57;CL:0000355!1.42e-09!57;CL:1000497!1.67e-09!18;CL:0002518!1.67e-09!18;CL:0002321!2.25e-09!248;CL:0000220!8.01e-09!246;CL:1000449!2.15e-08!16;CL:0000213!2.18e-07!57;CL:0000215!2.18e-07!57;CL:1000507!7.11e-07!12;CL:1000494!7.11e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.46e-19;32!CL:0000077;4.43e-16;19!CL:0000192;8.79e-10;43!CL:1000449;2.22e-09;15!CL:0002595;1.85e-08;5!CL:1000497;5.29e-08;17!CL:0002518;5.29e-08;17!CL:1000507;6.89e-08;10!CL:1000494;6.89e-08;10!CL:0002594;1.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.52e-20,32;CL:0000077,4.71e-16,19;CL:0000222,8.91e-16,121;CL:0000192,3.10e-13,43;CL:0000514,3.10e-13,43;CL:0000187,2.75e-11,55;CL:0000393,2.11e-10,61;CL:0000211,2.11e-10,61;CL:0000680,2.34e-10,58;CL:0000056,2.34e-10,58;CL:0000355,2.34e-10,58;CL:1000449,2.22e-09,15;CL:0002595,1.76e-08,5;CL:1000497,5.30e-08,17;CL:0002518,5.30e-08,17;CL:1000507,6.17e-08,10;CL:1000494,6.17e-08,10;CL:0002594,1.57e-07,4;CL:0002321,1.78e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;8.79e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.50e-28!118;UBERON:0004872!1.08e-22!84;UBERON:0001981!4.75e-19!60;UBERON:0007500!4.75e-19!60;UBERON:0004537!4.75e-19!60;UBERON:0006965!4.75e-19!60;UBERON:0001637!1.19e-18!42;UBERON:0003509!1.19e-18!42;UBERON:0004572!1.19e-18!42;UBERON:0001009!1.86e-18!113;UBERON:0002049!2.05e-17!79;UBERON:0007798!2.05e-17!79;UBERON:0000055!1.09e-16!69;UBERON:0004535!3.16e-16!110;UBERON:0004573!8.12e-16!33;UBERON:0004571!8.12e-16!33;UBERON:0000025!8.24e-16!194;UBERON:0003103!4.44e-14!69;UBERON:0007100!7.30e-12!27;UBERON:0004111!1.10e-11!241;UBERON:0000119!2.02e-10!312;UBERON:0000483!2.49e-10!309;UBERON:0000353!1.23e-09!17;UBERON:0003513!2.60e-09!8;UBERON:0000477!4.63e-09!286;UBERON:0000948!5.42e-09!24;UBERON:0005498!5.42e-09!24;UBERON:0004140!5.42e-09!24;UBERON:0009881!5.42e-09!24;UBERON:0004141!5.42e-09!24;UBERON:0003084!5.42e-09!24;UBERON:0007005!5.42e-09!24;UBERON:0004139!5.42e-09!24;UBERON:0004291!5.42e-09!24;UBERON:0005256!5.99e-09!143;UBERON:0000490!1.51e-08!138;UBERON:0004211!2.15e-08!16;UBERON:0001285!2.15e-08!16;UBERON:0007684!2.15e-08!16;UBERON:0003220!2.15e-08!16;UBERON:0004208!2.15e-08!16;UBERON:0001134!2.18e-08!61;UBERON:0002036!2.18e-08!61;UBERON:0003082!2.18e-08!61;UBERON:0002385!7.35e-08!63;UBERON:0001015!7.35e-08!63;UBERON:0000383!7.35e-08!63;UBERON:0006555!1.06e-07!17;UBERON:0005103!1.06e-07!17;UBERON:0000083!1.06e-07!17;UBERON:0009201!1.06e-07!17;UBERON:0004819!1.06e-07!17;UBERON:0006553!1.06e-07!17;UBERON:0003074!1.06e-07!17;UBERON:0003060!1.06e-07!17;UBERON:0002417!1.39e-07!61;UBERON:0000916!1.39e-07!61;UBERON:0004876!1.96e-07!20;UBERON:0000947!2.41e-07!21;UBERON:0010191!2.41e-07!21;UBERON:0005172!2.62e-07!55;UBERON:0005173!2.62e-07!55;UBERON:0000080!4.36e-07!18;UBERON:0002120!4.36e-07!18;UBERON:0004875!4.36e-07!18;UBERON:0005721!4.36e-07!18;UBERON:0005754!4.36e-07!18;UBERON:0007297!4.36e-07!18;UBERON:0009773!7.11e-07!12;UBERON:0001231!7.11e-07!12;UBERON:0004810!7.11e-07!12;UBERON:0003104!9.64e-07!238;UBERON:0009142!9.64e-07!238;UBERON:0000058!9.66e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.06e-15;25!UBERON:0004573;3.49e-12;33!UBERON:0004571;3.49e-12;33!UBERON:0001637;8.06e-12;42!UBERON:0003509;8.06e-12;42!UBERON:0004572;8.06e-12;42!UBERON:0000948;1.31e-11;22!UBERON:0006555;2.22e-09;15!UBERON:0004819;2.22e-09;15!UBERON:0001285;2.22e-09;15!UBERON:0007684;2.22e-09;15!UBERON:0003103;3.45e-09;61!UBERON:0003914;4.18e-09;74!UBERON:0003834;1.85e-08;5!UBERON:0001533;1.85e-08;5!UBERON:0003513;2.08e-08;7!UBERON:0000353;3.99e-08;15!UBERON:0004211;6.89e-08;10!UBERON:0009773;6.89e-08;10!UBERON:0001231;6.89e-08;10!UBERON:0004810;6.89e-08;10!UBERON:0001310;1.50e-07;4!UBERON:0007500;6.67e-07;56!UBERON:0001981;6.67e-07;56!UBERON:0004537;6.67e-07;56!UBERON:0004151;7.57e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.17e-28,117;UBERON:0004872,1.08e-19,83;UBERON:0001637,7.65e-17,42;UBERON:0003509,7.65e-17,42;UBERON:0004572,7.65e-17,42;UBERON:0007500,3.37e-16,59;UBERON:0001981,3.37e-16,59;UBERON:0004537,3.37e-16,59;UBERON:0006965,3.37e-16,59;UBERON:0007100,6.86e-16,27;UBERON:0001009,1.90e-15,112;UBERON:0003103,1.02e-14,68;UBERON:0004573,9.35e-14,33;UBERON:0004571,9.35e-14,33;UBERON:0000025,1.52e-13,192;UBERON:0004535,5.72e-13,109;UBERON:0000055,6.37e-13,68;UBERON:0002049,5.13e-12,78;UBERON:0007798,5.13e-12,78;UBERON:0000948,7.13e-12,24;UBERON:0005498,7.13e-12,24;UBERON:0004140,7.13e-12,24;UBERON:0009881,7.13e-12,24;UBERON:0004141,7.13e-12,24;UBERON:0003084,7.13e-12,24;UBERON:0007005,7.13e-12,24;UBERON:0004139,7.13e-12,24;UBERON:0004291,7.13e-12,24;UBERON:0003104,1.32e-11,160;UBERON:0009142,1.32e-11,160;UBERON:0005256,9.21e-10,122;UBERON:0007503,9.58e-10,78;UBERON:0004211,2.22e-09,15;UBERON:0009773,2.22e-09,15;UBERON:0001231,2.22e-09,15;UBERON:0001285,2.22e-09,15;UBERON:0007684,2.22e-09,15;UBERON:0004208,2.22e-09,15;UBERON:0001134,2.88e-09,62;UBERON:0002036,2.88e-09,62;UBERON:0003082,2.88e-09,62;UBERON:0004111,5.49e-09,240;UBERON:0002385,8.88e-09,64;UBERON:0001015,8.88e-09,64;UBERON:0000383,8.88e-09,64;UBERON:0006555,1.20e-08,16;UBERON:0004819,1.20e-08,16;UBERON:0004797,1.46e-08,7;UBERON:0003834,1.76e-08,5;UBERON:0001533,1.76e-08,5;UBERON:0003513,2.00e-08,7;UBERON:0000353,4.14e-08,15;UBERON:0004810,6.17e-08,10;UBERON:0000119,6.87e-08,309;UBERON:0000483,1.03e-07,306;UBERON:0001310,1.57e-07,4;UBERON:0002329,2.65e-07,71;UBERON:0003059,2.65e-07,71;UBERON:0007282,2.65e-07,71;UBERON:0004290,2.65e-07,71;UBERON:0009618,2.65e-07,71;UBERON:0003077,4.05e-07,72;UBERON:0007285,4.05e-07,72;UBERON:0007524,6.11e-07,73;UBERON:0002100,6.54e-07,199;UBERON:0004151,7.50e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,629.078877443863,94.2031576762777,0,0,0,0,16.8081286612944,15.6700577286234,20.4486825308465,17.5655807564582,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,2.76997704265939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0605128955545,257.643062114714,0,0,0,0,0,0,0.443458794925128,0.87834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549605231791222,0,0,0,0,4.93858995491861,9.93068856099141,0.286836620748814,22.3441080784965,98.1185800249037,119.55887521727,129.253795370592,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,2.60894021268048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.365921118388786,0.397589304964456,5.46111531486736,6.01234119089148,11.6067591402789,5.10968302706162,0,0,0,0,0,0,0,0,0,0,0.474541238222193,0,0,0,0.738155454624648,36.4628611888959,28.3986067818666,22.0513067078313,0,0,0,0,4.30459534900897,0.514703430895577,0,0,0,0,0,0,27.4229549848019,0,6.92711295991348,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30788020649984,0,4.26596662000667,0,0,0,0,0,0,0,3.0025378668211,0,0,0,4.6200953336531,0,256.223470500648,700.712900714636,944.244901714529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,4.1389228517002,0,0.737476674166813,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0.128139149255701,0,0.321707842287215,1.48418066444991,0.154209693802656,0,0,0,0,3.98836183652353,0,0,0.574072240823034,0,0,0,11.6293159027666,4.70609861506113,1.46139224653261,5.06647818685803,1.13733384070897,0.170093705276516,1.0795795805107,0,1.35473218771926,2.50844886927427,0.509752546090077,1.66215201785745,1.34324852833307,0,0,6.15480300279334,31.4894059871718,0.325378394664303,0.103041011647722,0,0,0,0,215.316465991174,0,0,0,0,0,0,0.93749290157711,0,0,0,0,0,0.929691098594572,9.12955805808856,0,0.924100740528266,32.4706678493383,0,7.78361720236464,124.661776352274,0,6.01120906965579,1.5250415513906,0,0,0.318203247925937,54.1614561737469,0,0,0,23.4531678625047,0,77.5115559479725,0,27.2959108387039,6.33900880540533,0.136499911407986,0,0,2.75682671773062,67.6707754746044,48.2295973779139,0,0,351.440772899403,12.7027634220898,4.22543403798362,0,0,363.091130407913,0,0,0,0,0,0,5.3624182042863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,1.90995587790152,0,0,0,0,0,0,0,0,0,0,1.94310496754094,0,34.2143546427988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.3206149006573,1.1528195219403,14.181707816744,86.7006027937624,4.46601623624687,19.2354946143911,3.19820865611181,0,0,0,0,0,0,0,0,0,0,14.8420725005638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14250933141343,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62074300650288,2.824276850433,0,0,0,0,0,25.7859264851974,0,80.154049165137,9.39557738447903,432.877433819819,479.429280198078,207.7454072981,148.185847741403,1616.16561414069,147.722952252385,0,0,0,0.13480708770837,0.0984274815147488,0,0,0,1.12527203925513,0.137539436597234,0,0.2249738915515,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,901.945501883189,207.896878694746,0,0,15.5559868416228,0,0,0,0.170388021785422,7.36528594880817,0,0,0.129282956361551,0,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310482014706917,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,2.54874827461924,0,8.22893671444175,0,0,19.3045672870342,20.5852924326189,514.848646852211,15.0542171285725,0.545545977607678,5.26311729508193,0,53.7429449743132,0,0,0,0,0,58.7569960367296,111.18356837718,83.201074663004,104.185113445725,0.734210113519403,18.4461506313932,7.72003617902431,39.9096970233247,70.1455909405148,257.154413015129,2.19625172848994,0,0.345430341731199,0.607719912354764,0,0,0,0,0,0,0,0,0,0,2.27006381426734,0,0,0,0,0,0,0,0,0,0,0,2.54403480522735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21023041222112,0,3.66669372273991,0,0,0,0,0,0.380494861163441,0,0,0,0,0,1.07140367175657,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0.314231179832004,0.560544326627578,0,0.215927591218621,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.34282092365053,0,0,0,0,0,0,0,0.655678681511872,1.41095188908457,0,0,0,0,2.113278637917,2.20905249094162,0,0,0,0,0,0,0.730336388246517,0,0,0,0.203974470572744,0,0,0,0,0,0,0.546327859818478,0.633492505057185,30.8006265820785,0,2.75684698604535,0,0.530450887527676,1.07185652062471,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,2.99394320891412,0,0,0,0,166.595069106453,0.122241444182866,0,0,4.02547587182052,0 | |||
|short_description=p1@NPPB | |||
}} |
Revision as of 16:21, 10 January 2014
Short description: | p1@NPPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPPB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_002521, uc001atj.2_5end |
EntrezGene: | NPPB |
HGNC: | 7940 |
UniProt: | P16860 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.52e-20 | 32 |
mesothelial cell | 4.71e-16 | 19 |
mesodermal cell | 8.91e-16 | 121 |
smooth muscle cell | 3.10e-13 | 43 |
smooth muscle myoblast | 3.10e-13 | 43 |
muscle cell | 2.75e-11 | 55 |
electrically responsive cell | 2.11e-10 | 61 |
electrically active cell | 2.11e-10 | 61 |
muscle precursor cell | 2.34e-10 | 58 |
myoblast | 2.34e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.34e-10 | 58 |
epithelial cell of nephron | 2.22e-09 | 15 |
smooth muscle cell of the subclavian artery | 1.76e-08 | 5 |
kidney cell | 5.30e-08 | 17 |
kidney epithelial cell | 5.30e-08 | 17 |
kidney tubule cell | 6.17e-08 | 10 |
nephron tubule epithelial cell | 6.17e-08 | 10 |
smooth muscle cell of the umbilical artery | 1.57e-07 | 4 |
embryonic cell | 1.78e-07 | 250 |