FFCP PHASE1:Hg19::chr1:158979792..158979814,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3428 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5395 | |||
|TSSclassifier=strong | |||
|UniProt=E7EPR3 | |||
|association_with_transcript=0bp_to_ENST00000430894,uc010pis.1_5end | |||
|coexpression_cluster_id=C3886 | |||
|description=CAGE_peak_2_at_IFI16_5end | |||
|id=chr1:158979792..158979814,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.75e-15!42;CL:0000860!2.19e-14!45;CL:0002194!4.08e-12!63;CL:0000576!4.08e-12!63;CL:0000040!4.08e-12!63;CL:0000559!4.08e-12!63;CL:0002371!5.28e-12!591;CL:0002009!2.51e-11!65;CL:0000055!1.69e-10!180;CL:0000766!3.79e-10!76;CL:0000557!5.14e-10!71;CL:0000144!5.24e-10!625;CL:0000548!5.94e-10!679;CL:0000004!5.94e-10!679;CL:0000255!5.94e-10!679;CL:0000839!7.04e-10!70;CL:0000012!1.47e-09!682;CL:0000220!4.61e-09!246;CL:0000057!1.32e-08!75;CL:0000076!1.62e-08!62;CL:0002321!1.92e-08!248;CL:0000222!6.33e-08!119;CL:0002620!3.55e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.82e-15;33!CL:0002057;1.82e-15;33!CL:0000473;3.18e-13;39!CL:0000234;3.18e-13;39!CL:0000576;2.33e-09;48!CL:0002620;3.47e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.13e-15,48;CL:0000234,1.13e-15,48;CL:0000860,6.02e-15,42;CL:0002057,6.02e-15,42;CL:0002194,7.53e-13,59;CL:0000576,7.53e-13,59;CL:0000040,7.53e-13,59;CL:0000559,7.53e-13,59;CL:0002009,5.49e-12,61;CL:0000766,1.21e-10,72;CL:0000557,1.53e-10,67;CL:0000839,1.73e-10,66;CL:0002321,4.63e-09,250;CL:0000076,6.21e-09,63;CL:0000057,1.43e-08,76;CL:0000222,2.42e-08,121;CL:0002620,3.39e-07,23;CL:0000723,9.32e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;4.37e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.54e-16!167;UBERON:0003102!9.77e-13!95;UBERON:0004765!8.44e-11!101;UBERON:0001434!8.44e-11!101;UBERON:0000467!1.12e-10!625;UBERON:0000480!1.52e-10!626;UBERON:0002371!2.50e-10!80;UBERON:0000926!8.46e-10!448;UBERON:0004120!8.46e-10!448;UBERON:0006603!8.46e-10!448;UBERON:0003081!1.42e-09!216;UBERON:0001474!2.86e-09!86;UBERON:0000468!5.96e-09!659;UBERON:0002199!9.01e-09!45;UBERON:0002416!9.01e-09!45;UBERON:0002097!3.12e-08!40;UBERON:0000914!6.69e-08!83;UBERON:0002329!6.69e-08!83;UBERON:0003077!6.69e-08!83;UBERON:0003059!6.69e-08!83;UBERON:0007282!6.69e-08!83;UBERON:0009618!6.69e-08!83;UBERON:0007285!6.69e-08!83;UBERON:0002193!6.88e-08!112;UBERON:0004872!7.64e-08!84;UBERON:0002390!1.14e-07!102;UBERON:0003061!1.14e-07!102;UBERON:0000486!1.80e-07!82;UBERON:0001637!2.87e-07!42;UBERON:0003509!2.87e-07!42;UBERON:0004572!2.87e-07!42;UBERON:0001981!8.04e-07!60;UBERON:0007500!8.04e-07!60;UBERON:0004537!8.04e-07!60;UBERON:0006965!8.04e-07!60;UBERON:0000055!8.44e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.06e-17,167;UBERON:0000926,8.04e-16,315;UBERON:0004120,8.04e-16,315;UBERON:0006603,8.04e-16,315;UBERON:0003102,3.29e-14,99;UBERON:0003081,5.92e-12,203;UBERON:0001434,2.73e-11,100;UBERON:0004765,6.92e-11,90;UBERON:0002371,8.25e-11,76;UBERON:0002405,4.94e-10,93;UBERON:0001474,1.40e-09,82;UBERON:0002199,4.30e-09,46;UBERON:0002416,4.30e-09,46;UBERON:0002050,9.56e-09,564;UBERON:0002097,1.49e-08,41;UBERON:0002193,3.90e-08,108;UBERON:0004872,4.77e-08,83;UBERON:0000923,5.27e-08,560;UBERON:0010316,5.27e-08,560;UBERON:0005291,5.27e-08,560;UBERON:0006598,5.27e-08,560;UBERON:0010317,5.27e-08,560;UBERON:0002532,5.27e-08,560;UBERON:0002390,6.68e-08,98;UBERON:0003061,6.68e-08,98;UBERON:0000486,7.14e-08,83;UBERON:0001637,2.73e-07,42;UBERON:0003509,2.73e-07,42;UBERON:0004572,2.73e-07,42;UBERON:0007500,4.83e-07,59;UBERON:0001981,4.83e-07,59;UBERON:0004537,4.83e-07,59;UBERON:0006965,4.83e-07,59;UBERON:0000055,4.92e-07,68 | |||
|phase1_expression=14.1709135831034,7.06531728840244,10.8534891153898,2.00146596706261,4.02264984984559,9.59572376510406,5.06599756336621,44.2203911398782,7.57438321779532,1.96587149201207,0,0.436882744260345,0.263766978228454,22.6492425916885,6.62794751455832,59.1646128877562,39.1751443215585,31.403333886657,32.691497518964,1.10808952269109,0.612002073732759,0.626909442956176,3.72106783270374,7.66496780408152,3.26410862946487,5.04328477936478,4.67973359864691,5.27362234801651,1.57345710739562,5.75744097145819,3.09632246632152,35.8574277546782,12.04823675113,17.7481924880058,1.39440961044543,3.69640004467296,2.93600439334847,5.53995408531877,4.01088894940283,4.99125002646459,27.5416033315107,30.4460046057841,38.8939107127622,44.4918610665468,66.8840420329193,46.5761397480607,27.1941973179651,23.0254017292222,28.4929861223495,113.063110182605,125.774906905788,159.389022944906,29.6481285433492,23.2374486090177,17.6054432572644,26.3539275359647,39.2984856083298,29.214052977861,72.8479663842748,50.0649282238706,37.7208904221434,99.6150926563883,133.840114264115,92.0645461150619,74.2935650889175,26.6671055604836,35.5008681927478,153.764183137127,155.40190968922,167.23541042294,78.0965358397046,58.1878664860352,63.9254022630587,28.941974224736,19.346991296819,19.2885953867706,29.3177727292352,32.4382088537654,45.9675177953649,7.12531859353121,12.9295840179409,12.4211624559951,1.75996244461323,1.63841583378639,0.889509253863555,1.28019066769952,0.800791974072025,1.14950487990897,1.32208974556972,0,0.569212969109448,1.17447437874188,0,1.32171328579026,5.60508562981536,1.84368859342554,1.57367816091066,1.96505381374582,1.64481199199607,1.00311897234407,0.32592226663359,0.946895611469467,0,4.67923918917729,0.589211814949674,1.10766947291811,0.812411591295047,2.81800903396485,3.51160238411671,3.61763390128087,4.97430032014527,7.24507714337631,0.14828656316206,0,1.04535523804977,3.96582699441482,0.383220493601921,1.71813722741315,1.77113784413652,0.95569624297229,0.651083453856419,0.950452044448374,2.55977702432214,1.4078527226986,0,2.8413270245282,0,0.604820229674197,1.33720097891754,0.724122019413995,41.4471672733735,12.0726154746655,17.5171709725637,14.4575660953827,6.01605492763067,6.0835537963546,3.9764297352555,0,2.07976597760949,0.665188192387692,1.22968699970376,2.03017567021455,6.55731518926576,16.3145154825149,8.76277962867645,13.2338600347443,9.70593111787716,1.90792499444274,4.0039643754609,2.97166001063652,26.8329249945052,22.3660994727592,13.8856200643038,14.6980064900242,36.4964509502618,53.3729001363731,25.2883909509541,32.0436781369968,37.7112238447913,29.455413923291,11.6820501961653,1.52054421143703,5.6134273236079,48.8991896860005,18.6332648012805,47.7753546319827,22.6774666352431,26.3510864330974,10.7321646226118,15.1882505530901,13.3737273069197,6.58902087180316,15.511210565933,7.84969293856562,11.9273268406876,36.8494788943927,38.6634807974599,50.1964086310424,24.826786753885,13.4562624034154,10.6748995729705,10.853372130355,29.253837327578,24.6520529887529,31.5481473008975,2.57307626996383,9.79499071615998,3.04617861383936,29.3430472220501,29.6645347203114,41.6961818739525,17.8500437938523,8.41739310714284,13.4832774434159,34.2979007708221,11.3007571926827,27.2780062304021,27.3240657174872,12.3633464639278,1.82032272387605,0,18.5169725349473,19.6436076198984,34.910078551007,22.8268362858036,14.7114141983529,12.7702350070607,27.7908848742052,45.7443571006598,14.7354598284812,28.8227385577004,46.5141198930824,49.774371622166,37.3578783066162,14.7032316501956,41.181425066869,23.0925702232041,54.0208276882405,25.5898718225592,59.9706870797792,20.235546773447,21.0571885295768,16.4473774541173,55.6591257110295,65.1863228212095,69.1199074887499,0,0,0.232387885739037,1.24393266018445,1.00928340350251,0.36497735907583,15.6449532329816,7.71889125831462,6.90674606762403,24.6115001856949,23.1001434134267,9.46454400318751,6.57480291304597,6.26628677697053,7.05881425487321,5.01122721412534,6.64357733511071,7.55055325696921,6.08286541888573,5.77120735419586,2.95262181849859,1.40241773803446,5.7620361586396,1.47008711385542,0,1.96565443335525,4.13552934676983,3.97316789473185,0,15.6126707371658,58.7164026936147,32.5965084447097,46.2433273093502,141.289967311916,4.23550796903422,2.07986957055916,7.21656710126366,0.695582429850461,7.98379120803587,17.0352408358067,10.648666789262,23.211006572621,0,0,21.4208795296036,5.6161023633417,10.1069190356335,28.1201501960331,69.2086368179301,94.7057649579142,34.3904727178937,45.3388944081781,9.20118429996507,52.22230321697,3.69803422855549,3.52457796419313,3.17063897517315,4.92345490362882,21.1447987992923,15.2795370223311,10.5495702489042,5.13217338068116,26.5294931174575,20.1229848755425,34.0133454830388,2.80327710863402,1.30788020649984,15.5477165940414,19.3907573636667,3.57656445851882,37.193321112464,17.2859775780166,9.36066932202295,4.11531798819427,2.83698264046557,3.99633268524149,17.0143812453196,6.51145926469732,1.64648067356154,39.4140782995419,9.59558261604874,8.71147060226772,13.2633325906218,13.9445353376047,5.39854152383108,32.8384207731214,43.1941098631629,31.6250909224547,16.054865317936,9.18895486672911,47.0701786634371,22.1515399201396,25.4790639962475,13.2505112797523,8.07013036753396,1.18218456121156,2.80315847317372,1.66845947163673,14.229298956458,10.4111883086097,19.3322203194424,13.4013012267479,21.6899175562076,14.2311334549965,5.9832291840805,17.4054515643135,12.3918406636331,17.005797716029,10.8506009479894,18.0934649531802,32.6525049498806,23.3399574250223,22.8425759235791,13.8435205874751,9.09630016223939,11.3820378421755,21.9194447516694,3.68738337083406,49.3498930178711,0.587403472388222,0.343143423810856,3.92859249633486,6.03999762292127,2.77491650288955,0.303127571446259,0,1.20956117331872,10.4205279283886,23.9400678329377,7.29716245525991,15.6329762091955,13.816095724801,5.79074116116987,1.48418066444991,44.4123918151648,22.0176539388278,63.4842915986745,53.483206205913,34.6306927810679,0,25.0633087879106,53.4990545717558,13.5481048834236,12.9284729284769,10.4899531967539,0.451199612907412,1.30926073077505,0,0,3.27210049567915,5.68666920354483,8.6747789691023,11.6594594695155,4.62681758070868,0.541892875087706,0,0,0,0.447749509444357,0,0,0,0,2.60302715731442,8.65544497840867,1.28197250745681,0.577566499444116,35.6044633557627,30.5528315637165,24.1025894766239,25.327728192536,34.5068902336803,27.3236541012511,16.2647155531746,41.6790550088902,19.2872202905924,14.318073405905,18.6076954501681,72.5600778434694,45.9334261002604,71.7183444219563,42.486267959331,14.8750575775131,39.6663557006607,8.3644472419272,40.9684661634198,9.04920251538937,14.7888608652762,19.0883945677038,10.0187420719394,7.07100901783368,9.8077621662805,11.4378116354295,1.79128453917934,35.5189360068154,24.1834468423712,10.20433232259,13.6703067763319,13.1777774273306,12.8415518556798,12.7374963391189,6.34041284692033,12.6377536871694,0,74.576327827173,11.6215161432431,13.7864910522066,12.8678943077879,12.4308928282267,4.41092274836899,14.5956574553068,22.7994460331957,2.89387767133344,17.7091583052591,12.9862641256131,9.914351939192,7.88747687090276,28.3954477364022,9.82490410131212,13.9101710077688,59.5998587638604,25.3329162357197,21.7334629353535,1.13841952129715,5.24902080367474,52.8259398863061,11.3951386841084,15.2447378805852,8.66122967146368,4.3050537267123,8.42357378338128,6.65145230305014,53.5255522482216,9.64150457541122,4.58782324285425,7.97506062043828,5.47933083552915,7.4045209155515,2.59389324477087,9.72056587028607,11.8968776444141,0,0,48.2729225482632,3.90186667764009,1.00988449083511,27.7453189058815,1.91311527274587,4.39074617152197,4.0216127727797,20.1089903587689,2.59697552219644,1.68478306868075,5.24939761776342,0,0,4.23229444504008,1.1241165257259,1.21079824314629,3.83261613921294,2.40453741329035,0,0,0,2.14926904942244,2.78406173895242,0,0,3.3307196799782,0,1.49712432326576,34.8689466667108,0,11.4786685805803,1.42068073403207,2.14870036263921,0.593929361665277,2.15012491469462,5.96488588659779,4.3607519087259,23.2635193497873,27.5222469958688,0,5.97743964753209,6.90709788827869,0,21.0673485954439,5.41573144028706,16.4850981460758,18.2432752829073,14.8587574980756,0,24.5622080035965,7.18449277040819,48.9002756636402,0.969332746095218,3.71072392647405,0,0,0,8.69999490521752,33.3414803476514,3.30529745380596,0,0,2.04123229368278,3.29887490373255,13.2861207872076,3.37670028151142,1.52581736317083,1.54810963903714,1.47773809476774,0.87754158861589,6.75418473817739,64.2743461124361,13.7740962721797,3.07643550786903,0,0,0,5.42301971544263,11.5412967686347,8.52855641629816,35.7676543685078,5.96524974301094,0.332423363800313,0,0,0,0,0.158936578980379,2.53197677433632,3.59112177950125,0,0,1.99052386215701,8.84575645033392,11.6095727537389,6.8199859596543,3.45979029050208,5.01225357626186,3.10045211711114,7.2231988256891,1.63985112007737,2.91927662745066,62.0256842014724,3.15614493394321,3.15667522279512,3.62972148145992,0.30607276163049,12.0686367090412,13.5291077473043,3.62908669890365,1.99396161812156,2.31694369112849,2.19753042885058,7.16834578637753,4.83836228250648,3.05084280628905,0,61.0492635891573,49.5366885442491,10.8330534310059,2.0638323896594,12.0945414111356,11.9866480021344,7.39039113478883,52.6650359532117,11.473296469895,11.2990370390266,19.8710790737789,17.4868858298631,0.696418755514666,7.82205530939212,26.8532047842638,1.49417096317547,14.3862918899134,0,0,0,67.1295358624778,23.4837292218667,28.2832841540154,12.0954743405517,18.82851233622,6.73188236399724,40.4530825862126,7.20504346451747,6.98217432349165,1.27746588066972,14.1822595668586,4.99485973130698,15.9190968725185,3.20824593616357,35.1757782042639,1.79711100449092,1.71690419254628,6.02562935093056,6.71834724867263,4.68389848605125,0,0,0,0,5.01980155725219,2.37085329784197,7.15706720828373,5.17572943223987,0.321506296930038,0.137539436597234,0,3.82455615637551,2.32140586367385,0.485996453264197,38.2395543863163,5.67401092554227,1.67854682031994,33.7921076862101,9.14365430597508,25.3328060461668,22.8702504439477,8.60719561475061,0,16.8329876543651,14.6917653504216,32.3321486508315,13.1703210718736,4.51508864121364,24.8766511806716,16.4302532704182,2.63794020620548,1.32506888912221,6.46414781807753,5.95046707842105,1.02652102730598,2.81926008926669,12.0669776201495,9.43225830597996,6.62782488555513,10.419486458051,2.76656284657122,2.55764456599881,178.097210917881,3.26410682021684,5.013797880454,7.04594826555962,5.57383472206668,0,2.65820453990096,4.51497180137264,3.3801551290755,12.0415931094915,6.54481404067428,1.55241007353459,0,15.3725901793391,18.501192340081,19.1261773475128,25.1734427077044,0,0,44.0301668516278,40.6661159134171,64.3574799343031,38.259407065568,52.5776914662882,66.7358416197402,39.3604917642709,40.3786566447848,30.465691314225,35.1895256975329,25.6467795133561,39.5826738703972,21.7368139626763,39.8117959527221,26.8500131703575,25.565508028775,10.9688054567969,15.2322084867518,37.4321074548289,24.5495689923455,27.3896920458346,25.9858905531956,20.700986212328,20.801443762484,52.8829385981501,29.9707045001668,23.9751306634437,6.16383457303371,14.7964698048699,18.0086061455996,15.8694147858591,26.6250845472409,48.4578674922806,3.76086566271124,1.54400723580486,22.1476890074494,27.7401959135033,18.3268336357369,30.4096393175531,0,0,34.3361750480442,4.28601152070365,0.974301544196942,0,0.490696182767533,3.93131818615695,8.35627889762646,20.0746517190696,18.5988278145085,0.533458648470704,8.61074898304078,27.808281724775,16.201323622162,40.7049367463583,34.8363265618465,0,18.0067435032459,0.157265941855896,0.218419276384028,0.509197589862076,1.70059936081346,9.91486114072018,1.67593475391973,26.7123654548872,0.630893960010027,0,12.6963339728646,9.49360979794921,1.02766760154335,1.41696576325585,4.62938191265739,1.43581454968528,0.252071696221718,0.138314504928436,1.45328081068666,2.85538840518309,46.8164617249892,25.3634905197642,137.754877489781,44.9394841324816,5.72073143200751,33.8276363769449,0.198916222116275,12.9361764760722,13.3125345344323,0.781514011233092,0,34.3921026771203,17.0034499149602,0.810451015420736,5.46754669029693,3.30698874401895,0.380494861163441,0,2.74128883428591,12.9014906381217,10.9040171502965,25.1691982450003,3.21421101526972,4.03540466662589,3.03482802118316,3.64259506162076,6.65267776219791,5.64646539023318,39.0992661517314,2.03909198930495,0.131545547125698,0.236387681767936,0.889851215136553,13.2653326917369,3.45654297815204,0.560544326627578,0,8.85303123996348,12.4215438850633,1.71543706023975,0,0,0.173858272302579,6.41369091784202,74.3906029345302,67.4337984521102,22.1203091780509,1.29068207646083,49.3444443046457,67.3185897597346,2.54032230114557,6.8732060563215,9.61639795559392,5.7332336338646,0,5.20196238160788,2.31644057466312,3.88457302312737,8.93166419649349,0,17.9713067431882,0,0,0,0,0,1.50962843566674,1.92935395269862,3.27839340755936,0,8.58019126138669,0.942706188406504,19.2382297772646,19.6050624215877,2.9585900930838,12.064825142835,13.3457163531392,6.70362034925203,8.09523362991924,79.6350566181233,69.873184599707,8.98703306918684,7.30336388246517,2.2936464170227,6.88029999126966,0,0.407948941145488,0.436350690340377,3.7031878836078,31.2475815260071,25.8818352033594,45.4257890229979,1.13549782351571,8.95977690102303,0,1.83579893535567,2.93939145792117,11.1192828437162,1.25353769646188,7.65364852004218,0.535928260312357,5.80418607621146,7.55060869791835,14.7131447511677,5.95161078659351,10.334225573761,11.1734485732544,12.7830323341899,8.08318910132694,3.84022659020617,33.3106624282351,10.6092323336437,5.45551629418159,27.8282156923584,20.2922817493068,30.0378061174496,8.53818767021724,23.1686738744328,13.1144795075617,4.69281884806909,6.23431365332619,5.2896503181046,23.9672438706785,8.85604691800515,6.09080135376143 | |||
|short_description=p2@IFI16 | |||
}} |
Revision as of 21:37, 10 January 2014
Short description: | p2@IFI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IFI16_5end |
Coexpression cluster: | C3886_CD14_malignant_oral_Keratinocyte_Mallassezderived_Smooth_Small |
Association with transcript: | 0bp_to_ENST00000430894, uc010pis.1_5end |
EntrezGene: | IFI16 |
HGNC: | 5395 |
UniProt: | E7EPR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.13e-15 | 48 |
phagocyte | 1.13e-15 | 48 |
classical monocyte | 6.02e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.02e-15 | 42 |
monopoietic cell | 7.53e-13 | 59 |
monocyte | 7.53e-13 | 59 |
monoblast | 7.53e-13 | 59 |
promonocyte | 7.53e-13 | 59 |
macrophage dendritic cell progenitor | 5.49e-12 | 61 |
myeloid leukocyte | 1.21e-10 | 72 |
granulocyte monocyte progenitor cell | 1.53e-10 | 67 |
myeloid lineage restricted progenitor cell | 1.73e-10 | 66 |
embryonic cell | 4.63e-09 | 250 |
squamous epithelial cell | 6.21e-09 | 63 |
fibroblast | 1.43e-08 | 76 |
mesodermal cell | 2.42e-08 | 121 |
skin fibroblast | 3.39e-07 | 23 |
somatic stem cell | 9.32e-07 | 433 |