FFCP PHASE1:Hg19::chr10:65028770..65028782,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221037 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12313 | |||
|TSSclassifier=strong | |||
|UniProt=A0T124 | |||
|association_with_transcript=43bp_to_ENST00000542921_5end | |||
|description=CAGE_peak_10_at_JMJD1C_5end | |||
|id=chr10:65028770..65028782,- | |||
|ontology_enrichment_celltype=CL:0000738!1.01e-13!140;CL:0000766!3.86e-13!76;CL:0002057!3.77e-12!42;CL:0000557!1.21e-11!71;CL:0000839!2.34e-11!70;CL:0002031!3.11e-11!124;CL:0000860!3.96e-11!45;CL:0000037!5.42e-11!172;CL:0000566!5.42e-11!172;CL:0002032!2.29e-10!165;CL:0000837!2.29e-10!165;CL:0000763!7.75e-10!112;CL:0000049!7.75e-10!112;CL:0002009!1.60e-09!65;CL:0002087!1.99e-09!119;CL:0000988!6.40e-09!182;CL:0002194!6.70e-09!63;CL:0000576!6.70e-09!63;CL:0000040!6.70e-09!63;CL:0000559!6.70e-09!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.07e-12;33!CL:0002057;4.07e-12;33!CL:0000473;2.73e-09;39!CL:0000234;2.73e-09;39!CL:0000766;3.02e-08;69!CL:0000094;1.85e-07;8!CL:0000576;2.21e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.79e-15,72;CL:0000860,1.33e-12,42;CL:0002057,1.33e-12,42;CL:0000738,1.46e-12,136;CL:0000839,2.07e-12,66;CL:0000557,3.10e-12,67;CL:0000473,1.38e-11,48;CL:0000234,1.38e-11,48;CL:0002031,2.31e-11,120;CL:0000763,2.20e-10,108;CL:0000049,2.20e-10,108;CL:0002032,2.87e-10,161;CL:0000837,2.87e-10,161;CL:0000037,6.43e-10,168;CL:0002009,1.99e-09,61;CL:0002194,5.82e-09,59;CL:0000576,5.82e-09,59;CL:0000040,5.82e-09,59;CL:0000559,5.82e-09,59;CL:0000988,8.15e-09,177;CL:0002087,3.26e-08,115;CL:0000094,2.27e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.42e-08;42!UBERON:0006215;6.23e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.71e-25!115;UBERON:0001049!1.98e-14!57;UBERON:0005068!1.98e-14!57;UBERON:0006241!1.98e-14!57;UBERON:0007135!1.98e-14!57;UBERON:0002616!2.20e-13!59;UBERON:0002780!2.59e-12!41;UBERON:0001890!2.59e-12!41;UBERON:0006240!2.59e-12!41;UBERON:0001017!7.26e-12!82;UBERON:0003080!1.19e-11!42;UBERON:0005743!4.25e-11!86;UBERON:0000955!6.71e-11!69;UBERON:0006238!6.71e-11!69;UBERON:0000073!4.33e-10!94;UBERON:0001016!4.33e-10!94;UBERON:0003075!3.40e-09!86;UBERON:0007284!3.40e-09!86;UBERON:0002020!5.52e-09!34;UBERON:0003528!5.52e-09!34;UBERON:0002371!6.20e-09!80;UBERON:0001893!1.14e-08!34;UBERON:0002390!1.77e-08!102;UBERON:0003061!1.77e-08!102;UBERON:0002346!2.30e-08!90;UBERON:0002791!2.59e-08!33;UBERON:0001869!3.14e-08!32;UBERON:0001474!5.32e-08!86;UBERON:0002619!2.92e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001894;9.80e-09;7!UBERON:0000073;4.09e-08;53!UBERON:0002616;4.09e-08;53!UBERON:0002784;6.32e-08;4!UBERON:0002780;1.87e-07;41!UBERON:0001890;1.87e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.90e-18,114;UBERON:0001049,1.86e-15,56;UBERON:0005068,1.86e-15,56;UBERON:0006241,1.86e-15,56;UBERON:0007135,1.86e-15,56;UBERON:0000073,3.10e-14,53;UBERON:0002616,3.10e-14,53;UBERON:0003075,4.68e-11,82;UBERON:0007284,4.68e-11,82;UBERON:0002346,3.64e-10,86;UBERON:0002371,6.63e-10,76;UBERON:0002780,1.09e-09,41;UBERON:0001890,1.09e-09,41;UBERON:0003080,1.09e-09,41;UBERON:0006240,1.09e-09,41;UBERON:0001474,1.30e-09,82;UBERON:0000955,2.43e-09,68;UBERON:0006238,2.43e-09,68;UBERON:0001894,3.68e-09,7;UBERON:0006222,3.68e-09,7;UBERON:0001017,4.57e-09,81;UBERON:0002784,3.32e-08,4;UBERON:0004765,4.18e-08,90;UBERON:0010314,6.69e-08,132;UBERON:0010371,8.61e-08,104;UBERON:0003076,1.71e-07,15;UBERON:0003057,1.71e-07,15;UBERON:0001016,1.80e-07,89;UBERON:0001434,3.46e-07,100;UBERON:0002405,7.93e-07,93 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,1.18009283054671,2.30297638858328,1.54816123316076,0,0,0,0.0774672005803016,0,0,3.32397245119126,1.20326668482085,1.95309783644267,0.223915474239924,0,0.515151135268373,0.726991193897824,0,0.485168122375632,0.232429036905685,1.23350366406548,1.54853185447552,0.863077176966451,1.0246428261164,1.6553756092201,1.72372840368309,3.22742341791913,1.35426486594342,0.564727018627814,0,0.449446968890169,2.14258724659632,1.28371610830437,1.91801137739712,0.329851300186716,0,1.70489900213078,1.45104619314292,1.13477044938228,1.24564449799115,1.50749199154046,1.0429658368404,1.08594422352558,1.21079900526674,0.368277635987565,0.316462387440884,0.211255286311942,0.212604299965044,0.419317291016752,0.673971786878971,1.35159203557356,0.32145117339416,0,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0.426730222566507,0,0,0,0,3.41527781465669,1.76171156811282,1.14681968437569,0,1.12101712596307,0.263384084775077,0.983548850569165,1.57204305099666,2.2616164889946,0.668745981562712,0.32592226663359,0,1.94826728407911,0.111410456885174,0.294605907474837,0.664601683750863,1.08321545506006,0.384273959177026,0,0.164437904603676,0.276350017785848,0,0.296573126324121,0.535081656179426,0,0.113309342697566,0.383220493601921,1.03088233644789,0.759059076058509,0.318565414324097,0,0,0,0,0,0.710331756132051,0,2.21767417547206,0.802320587350522,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.785874452986276,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,1.31780417436063,3.87780264148325,0,0.496971951695318,0.25326102332916,1.32409180813219,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0.85422955527427,0.211931901159562,0,0.206105058476878,0,0,0,0.0974370051611986,0.504867548488229,0.276149695926898,0.484938170456436,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0,0.365921118388786,0.397589304964456,0.464775771478074,0.725627385107593,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0.858486162094873,0.492434012174795,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0,0,3.94130590316755,0.088048434013226,2.07328115540772,1.58531948758658,0.6312121671319,0.063497894292169,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,2.56139988262505,1.50939302401662,1.15508732651774,0.76228387266739,0,0,0.335032530668698,0,0.749007023947182,0,2.07207756718018,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,1.03384013061444,0.862856803274467,0.640365346820666,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,1.31555925987561,1.8300481571743,0,0,0,2.88514832613622,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.170453254832202,0.267096106940212,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,0,2.82431402330337,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0.822724546172388,0,0.540031437238115,0,0.320472213382419,0.962479855263359,0.245040215981032,0.185803175125719,0.144269212976445,0,0.159426272728822,0.199579371432817,0,0.211673582723883,0.973865820823666,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,1.22896305723383,0.671028323677248,0.667396566847634,0,0,0,0,0,0,0,0.73254089635947,0.121360521749513,0.111443384277478,0,0,0.593929361665277,0.307160702099232,0,0.562677665642051,0.111308705022906,0,0,0.796991953004279,0.552567831062295,0,0.306806047506464,0.246169610922139,0.311039587661807,0.179736702294654,0.179021174675609,0,0.887790650732402,0,0,0,0.556608588971108,0,0.260427761085233,0.437299999980979,0,0,0,0,0,0.291604613383254,0.173624994933292,1.77148277162768,2.53252521113357,6.10326945268333,5.52896299656123,2.65992857058193,0.658156191461918,0.21787692703798,0.697118721393016,2.07765697960252,0.113942055847001,0,0,0,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0.225595660617181,0.19606253431774,0.167821586975843,0.37950746544837,0.158936578980379,0,0,0.141353071433941,0,0,1.06149077404007,1.83309043480088,0,0,0,0.404406797884062,4.01288823649394,1.40558667435203,0,0.19566461893209,0.971121518136371,1.97292201424695,3.62972148145992,0.30607276163049,1.64285107034069,0.300646838828985,0,0,0.330991955875499,0,0,0.284609546029793,0.416024019039416,0,0.195984794828755,0.261177619741208,1.39781334593624,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0.678923115418936,4.05978182780901,4.06765333404958,0,0.19871461170299,0.886351143382302,0,0.160317640503067,1.06726497369676,0,0,0.229073192331831,0.171594997861965,0,0.124252535565433,0,0.407712618220842,0.209205692624666,0,0,0.600420288709789,0.547621515567972,2.55493176133945,0.429765441419957,0.525774708558629,4.46851842035607,2.06244381610515,0,0,0,0.669514372325618,0.470284307407084,0,0,0.236349546921671,0.412079291905832,0.26961417541674,0.196854963029498,0.254019996197353,0.795229689809303,2.04305109167363,0.482259445395058,0.825236619583403,0.415440338029185,0.449947783103001,1.5476039091159,0.242998226632099,0,0.157611414598396,0.472091293214983,0.105600336519406,0,0.575745591958336,1.42939065274673,0.662091970365432,0,0,0,0,0,0.328370082997356,0,0.679872549120754,0,0,0.904980694530854,1.45455861916959,0.171086837884329,0,1.17466153824464,4.40172054279065,0.828478110694391,0,0,1.46151118057075,0.638341257770182,0.544017803369474,1.0027595760908,2.75711019087115,0.655745261419609,0,0.886068179966986,0.976210119215705,1.6274820991845,1.14681839138014,1.33114861844223,0.558867626472451,0.138348634936231,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0.28984205722165,0.149254802886874,0.934853239388898,0,0.189403005275089,0.251567901752575,0,0.457680136793847,0.302461847526478,0.310874401165561,0,0.159296767163702,0,0.465788870628778,0.414706207840855,0,1.04349012362347,0.150257608997218,0.380805212168795,0,0.181848659202559,0.429642228169954,0,0,0,0,0,1.26184898228651,0.192619830407303,1.28664954824955,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0.194860308839388,0.398594520940089,0,0,0.245772908753719,0.422624246717254,0.19998739585493,0.106691729694141,0,0,0,0.139879507719444,0,0,0.323474434190045,0,0.436838552768056,0,0,0.371807292777007,0,0.318004350653419,0.0788617450012534,1.60114149657094,0,0,0.706521476061055,1.41696576325585,1.43670473151436,1.43581454968528,1.00828678488687,0.276629009856872,1.13032951942296,0,0.0981477185010256,0,0,0,0,0,0,1.88025820873143,0,0,0,0,0.443568258651136,0.87798860003913,0,1.44680757550829,0.317079050969534,1.09394961803644,0,1.48863353516788,0,0,2.67850917939143,7.0619581665953,0.606965604236632,1.82129753081038,0.177404740325278,0.230467975111559,0.342976018874837,1.35939465953663,0.460409414939944,0.236387681767936,0.556157009460346,0.627944742804112,1.72827148907602,0.840816489941367,0,0,0,1.85839014859306,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0.118332000730565,0.170426809518315,2.11693525095465,0,0.31020638566432,0,0,0.196300467230486,0.121917924982269,0.647428837187895,0.205325613712494,3.4794432940146,1.94284397223656,0,0.397901550322736,0.594600453887843,0.11294608203896,0,0,1.389134845943,0.218559560503957,0,0.490296643507811,0,1.17785080268967,1.18818560130834,0,0,0.563903507879121,0.257831551894309,0.0999411559249289,0,0,0.240724100067505,1.46067277649303,0,0.573358332605805,0.315543124386369,0.203974470572744,0,4.2322147241232,0,0,0,0.252332849670158,0.109265571963696,0,0.101988829741982,0.534434810531121,0.0918948995348449,0.250707539292375,0.985123076837112,1.07185652062471,1.65833887891756,2.48239190068549,2.34557380091079,2.14257988317366,0.0645889098360061,0.744896571550295,0.112131862580613,0.25458863311266,2.02117188958219,3.26575121845442,2.05339980651169,0.202056159043763,0.430333232356058,2.32862249582209,0,0.426909383510862,0,0,0,1.833621662743,1.62758471326295,0,0.805095174364105,0 | |||
|short_description=p10@JMJD1C | |||
}} |
Revision as of 03:06, 11 January 2014
Short description: | p10@JMJD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_JMJD1C_5end |
Coexpression cluster: | NA |
Association with transcript: | 43bp_to_ENST00000542921_5end |
EntrezGene: | JMJD1C |
HGNC: | 12313 |
UniProt: | A0T124 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.79e-15 | 72 |
classical monocyte | 1.33e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.33e-12 | 42 |
leukocyte | 1.46e-12 | 136 |
myeloid lineage restricted progenitor cell | 2.07e-12 | 66 |
granulocyte monocyte progenitor cell | 3.10e-12 | 67 |
defensive cell | 1.38e-11 | 48 |
phagocyte | 1.38e-11 | 48 |
hematopoietic lineage restricted progenitor cell | 2.31e-11 | 120 |
myeloid cell | 2.20e-10 | 108 |
common myeloid progenitor | 2.20e-10 | 108 |
hematopoietic oligopotent progenitor cell | 2.87e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.87e-10 | 161 |
hematopoietic stem cell | 6.43e-10 | 168 |
macrophage dendritic cell progenitor | 1.99e-09 | 61 |
monopoietic cell | 5.82e-09 | 59 |
monocyte | 5.82e-09 | 59 |
monoblast | 5.82e-09 | 59 |
promonocyte | 5.82e-09 | 59 |
hematopoietic cell | 8.15e-09 | 177 |
nongranular leukocyte | 3.26e-08 | 115 |
granulocyte | 2.27e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.90e-18 | 114 |
neural tube | 1.86e-15 | 56 |
neural rod | 1.86e-15 | 56 |
future spinal cord | 1.86e-15 | 56 |
neural keel | 1.86e-15 | 56 |
regional part of nervous system | 3.10e-14 | 53 |
regional part of brain | 3.10e-14 | 53 |
neural plate | 4.68e-11 | 82 |
presumptive neural plate | 4.68e-11 | 82 |
neurectoderm | 3.64e-10 | 86 |
bone marrow | 6.63e-10 | 76 |
regional part of forebrain | 1.09e-09 | 41 |
forebrain | 1.09e-09 | 41 |
anterior neural tube | 1.09e-09 | 41 |
future forebrain | 1.09e-09 | 41 |
bone element | 1.30e-09 | 82 |
brain | 2.43e-09 | 68 |
future brain | 2.43e-09 | 68 |
diencephalon | 3.68e-09 | 7 |
future diencephalon | 3.68e-09 | 7 |
central nervous system | 4.57e-09 | 81 |
regional part of diencephalon | 3.32e-08 | 4 |
skeletal element | 4.18e-08 | 90 |
structure with developmental contribution from neural crest | 6.69e-08 | 132 |
ecto-epithelium | 8.61e-08 | 104 |
posterior neural tube | 1.71e-07 | 15 |
chordal neural plate | 1.71e-07 | 15 |
nervous system | 1.80e-07 | 89 |
skeletal system | 3.46e-07 | 100 |
immune system | 7.93e-07 | 93 |