FFCP PHASE1:Hg19::chr12:66037894..66037897,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1614 | |||
|description=CAGE_peak_at_chr12:66037894..66037897,- | |||
|id=chr12:66037894..66037897,- | |||
|ontology_enrichment_celltype=CL:0002371!4.72e-25!591;CL:0000144!2.38e-24!625;CL:0000055!5.34e-23!180;CL:0000680!1.40e-21!57;CL:0000056!1.40e-21!57;CL:0000355!1.40e-21!57;CL:0000183!4.50e-21!59;CL:0000548!1.94e-20!679;CL:0000004!1.94e-20!679;CL:0000255!1.94e-20!679;CL:0000012!5.19e-20!682;CL:0000220!3.77e-19!246;CL:0002321!3.84e-19!248;CL:0000187!4.29e-19!54;CL:0000192!2.21e-16!42;CL:0000514!2.21e-16!42;CL:0000393!1.25e-15!60;CL:0000211!1.25e-15!60;CL:0000003!1.16e-14!722;CL:0000222!1.35e-13!119;CL:0000359!2.58e-13!32;CL:0000057!3.17e-11!75;CL:0000723!1.87e-10!436;CL:0000034!8.54e-10!444;CL:0000048!2.36e-09!430;CL:0002368!2.48e-08!13;CL:0002159!2.86e-08!13;CL:0002540!3.11e-07!6;CL:0002551!4.70e-07!6;CL:0002077!5.79e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002159;8.45e-13;14!CL:0002368;4.57e-12;13!CL:0000680;2.19e-11;7!CL:0002540;3.72e-11;6!CL:0000187;3.94e-11;55!CL:0002551;7.84e-11;6!CL:0000359;1.10e-10;32!CL:0002202;2.47e-09;9!CL:0002632;2.47e-09;9!CL:0000192;5.18e-09;43!CL:0000188;1.91e-08;9!CL:0000056;8.08e-08;4!CL:0000393;9.86e-08;61!CL:0000211;9.86e-08;61!CL:0002076;1.63e-07;42!CL:0000723;3.22e-07;61!CL:0000569;5.47e-07;4!CL:0000244;5.78e-07;4!CL:0000731;5.78e-07;4!CL:0002328;8.65e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.55e-21,58;CL:0000056,7.55e-21,58;CL:0000355,7.55e-21,58;CL:0000187,2.03e-17,55;CL:0002321,7.39e-16,250;CL:0000393,7.74e-15,61;CL:0000211,7.74e-15,61;CL:0002159,7.34e-13,14;CL:0000192,7.96e-13,43;CL:0000514,7.96e-13,43;CL:0002368,5.89e-12,13;CL:0000359,3.21e-11,32;CL:0002540,3.67e-11,6;CL:0002551,7.37e-11,6;CL:0002076,2.72e-09,42;CL:0002202,2.74e-09,9;CL:0002632,2.74e-09,9;CL:0000188,1.73e-08,9;CL:0000222,2.71e-08,121;CL:0000515,8.67e-08,4;CL:0000723,4.87e-07,433;CL:0000569,5.39e-07,4;CL:0000011,5.39e-07,4;CL:0000244,6.13e-07,4;CL:0000731,6.13e-07,4;CL:0002328,8.51e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000355;1.58e-12;58!CL:0000514;5.18e-09;43!CL:0000515;8.08e-08;4!CL:0000011;5.47e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.09e-28!83;UBERON:0002329!5.09e-28!83;UBERON:0003077!5.09e-28!83;UBERON:0003059!5.09e-28!83;UBERON:0007282!5.09e-28!83;UBERON:0009618!5.09e-28!83;UBERON:0007285!5.09e-28!83;UBERON:0000486!3.73e-26!82;UBERON:0004290!2.83e-23!70;UBERON:0001134!4.95e-19!61;UBERON:0002036!4.95e-19!61;UBERON:0003082!4.95e-19!61;UBERON:0002385!6.84e-18!63;UBERON:0001015!6.84e-18!63;UBERON:0000383!6.84e-18!63;UBERON:0005256!2.37e-17!143;UBERON:0001637!3.01e-12!42;UBERON:0003509!3.01e-12!42;UBERON:0004572!3.01e-12!42;UBERON:0002100!8.13e-12!216;UBERON:0002049!1.05e-11!79;UBERON:0007798!1.05e-11!79;UBERON:0004573!8.61e-11!33;UBERON:0004571!8.61e-11!33;UBERON:0003102!1.70e-10!95;UBERON:0000055!7.32e-10!69;UBERON:0000119!4.22e-09!312;UBERON:0000490!6.08e-09!138;UBERON:0000483!9.13e-09!309;UBERON:0001981!9.79e-09!60;UBERON:0007500!9.79e-09!60;UBERON:0004537!9.79e-09!60;UBERON:0006965!9.79e-09!60;UBERON:0004535!1.77e-08!110;UBERON:0002199!3.98e-08!45;UBERON:0002416!3.98e-08!45;UBERON:0001009!7.36e-08!113;UBERON:0000475!1.12e-07!365;UBERON:0003104!1.31e-07!238;UBERON:0009142!1.31e-07!238;UBERON:0004872!2.57e-07!84;UBERON:0000947!3.96e-07!21;UBERON:0010191!3.96e-07!21;UBERON:0002204!4.07e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;9.79e-10;15!UBERON:0001558;9.79e-10;15!UBERON:0002067;3.21e-09;9!UBERON:0001134;4.66e-09;16!UBERON:0002036;4.66e-09;16!UBERON:0002385;1.64e-08;31!UBERON:0001015;1.64e-08;31!UBERON:0000383;1.64e-08;31!UBERON:0004573;4.61e-08;33!UBERON:0004571;4.61e-08;33!UBERON:0001637;3.86e-07;42!UBERON:0003509;3.86e-07;42!UBERON:0004572;3.86e-07;42!UBERON:0004815;8.65e-07;3!UBERON:0002031;8.65e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.75e-30,83;UBERON:0002329,1.14e-25,71;UBERON:0003059,1.14e-25,71;UBERON:0007282,1.14e-25,71;UBERON:0004290,1.14e-25,71;UBERON:0009618,1.14e-25,71;UBERON:0003077,3.89e-25,72;UBERON:0007285,3.89e-25,72;UBERON:0007503,7.93e-25,78;UBERON:0007524,1.28e-24,73;UBERON:0001134,7.51e-19,62;UBERON:0002036,7.51e-19,62;UBERON:0003082,7.51e-19,62;UBERON:0002385,5.99e-18,64;UBERON:0001015,5.99e-18,64;UBERON:0000383,5.99e-18,64;UBERON:0005256,7.16e-15,122;UBERON:0000490,1.33e-12,148;UBERON:0001637,6.14e-11,42;UBERON:0003509,6.14e-11,42;UBERON:0004572,6.14e-11,42;UBERON:0000483,2.56e-10,306;UBERON:0003102,3.33e-10,99;UBERON:0000119,4.88e-10,309;UBERON:0002100,5.91e-10,199;UBERON:0007196,1.15e-09,15;UBERON:0001558,1.15e-09,15;UBERON:0003104,1.47e-09,160;UBERON:0009142,1.47e-09,160;UBERON:0002067,2.95e-09,9;UBERON:0004016,2.95e-09,9;UBERON:0010083,2.95e-09,9;UBERON:0002050,3.31e-09,564;UBERON:0000926,3.74e-09,315;UBERON:0004120,3.74e-09,315;UBERON:0006603,3.74e-09,315;UBERON:0004573,9.86e-09,33;UBERON:0004571,9.86e-09,33;UBERON:0005423,1.47e-08,581;UBERON:0000923,5.98e-08,560;UBERON:0010316,5.98e-08,560;UBERON:0005291,5.98e-08,560;UBERON:0006598,5.98e-08,560;UBERON:0010317,5.98e-08,560;UBERON:0002532,5.98e-08,560;UBERON:0000922,6.90e-08,592;UBERON:0007500,7.14e-08,59;UBERON:0001981,7.14e-08,59;UBERON:0004537,7.14e-08,59;UBERON:0006965,7.14e-08,59;UBERON:0000055,1.24e-07,68;UBERON:0002204,4.53e-07,167;UBERON:0004815,8.51e-07,3;UBERON:0002031,8.51e-07,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,5.68547886084148,0.261185628199839,1.22866968250754,1.39560233594486,0,0,0.618831764800233,0.331397375727916,2.01697543935533,0,0.730310090387373,1.46379839637152,0.369363174230364,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0,15.6301608161418,18.072355126695,33.2778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.263504357079378,0,6.55731518926576,3.33705998505986,0,0,0,0,0,0,0.993812036833525,2.58070378531837,0.347140501607594,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.549605231791222,0,0,2.18047026071267,0,1.2663051166458,76.267688148414,2.0078563452417,3.54668382198357,0.560677600142307,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0.234321431833797,6.86752169026705,11.409436430889,4.48346041655403,11.978318861664,10.1979954951923,7.72479436862367,4.08308342509786,2.7023549808589,1.54988671763648,0,0,4.55080680969013,2.87447256726495,0.673344455816265,1.37630371859161,3.3247693858102,0.877955241761676,0.612975591598039,0.150238058906597,0.453728732640084,0.717558542755448,0,0,0,0.309157587715317,0.515281080091258,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0.847802961552438,4.63826047591912,6.2731607735892,3.15485054927904,0,0.132529768321485,0,0,0,0,0,0,6.90674606762403,0.928735856063958,3.60939740834793,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0.4115740113314,0,0,0,0,0,0,0.514703430895577,6.58501712451753,16.8602629886429,2.81481122752566,1.48141512253647,0,0,0,0,0,0.433099343283221,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0,0,13.1227367581488,2.51973192298289,5.38745369521069,0.626909658919938,4.94077695473735,11.8848630541215,0,0,0,0,0,0.571481048629521,3.05590740446622,2.34434894420094,0,0.205654985406647,0,0.285826432630578,0.560655421726804,0,0.66004457238855,0,3.57656445851882,3.381211010224,0.531876233169741,1.04007436911366,7.9734286021264,11.3479305618623,8.79193190753128,0,0,0,2.60588947434988,0,0,0.904318131178758,1.74306691720059,0.199945982364114,0,0,0,0.239624855491583,0,4.27910715122155,11.5825045334063,15.4107241912788,7.34149949283572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35632511849868,0,0.178428988797162,0,0,0.902838299183157,0,0,0,0.737476674166813,1.82455590382974,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0.64341568457443,0,2.31314540703983,4.26148140751505,1.72467027628999,0,0.581051892299796,0,9.42380410425439,2.30202472339741,0,0.728364672026868,0.262248829918848,0,0.539107359730903,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0,0,1.62567862526312,0.501689773854853,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0,0,15.5051695258967,5.20048196829217,0,0,8.16457670707615,8.74970945938938,10.1999063638553,2.57808587683857,1.59518363305651,8.26698285936179,0.178064071293475,3.14041339185858,2.11409074101617,43.0054841106748,0.50578890427775,0,4.40737285562896,6.2733354314454,0.308033580176089,0.532306030317022,3.47973196830029,0.18532421910392,1.5743737541619,1.48863347743867,0.949138274156178,0.190630193923825,6.39744478278335,0,0.318203247925937,3.13979456079692,0.899362287916574,0,0.942499218765491,1.61745985258653,0,0.421258456238981,0,1.70599442741899,0,1.09199929126389,0.141405431953713,2.26016233240486,1.10273068709225,1.99031692572366,3.06915619677634,2.31510213706675,1.31178950409327,1.62328301570163,1.239293992399,4.22543403798362,2.15117028306077,0.294747123039363,1.07001315444375,9.93330979397674,0.211107635297664,0,0.379473173765715,0,24.247972406829,17.4278591639305,4.3556393944529,0,10.3321289441095,6.73885902670502,4.87773168890343,1.1486170010348,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34087408674291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0.676786981851542,0.784250137270958,0.503464760927528,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,0.0967563312890851,0.292357268344742,0.0821154570532092,0,0,0,0.137041924646751,0.993573058514948,0,0,0,0,0,0,0,0,0,0.49701014226173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633602019116439,0,0,0,0,0,9.23099322981312,6.91377192961014,11.1039702437199,0,5.50019889020571,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,2.23882204330311,0.233713309847224,0.554805861502613,12.690001353431,10.3142839718556,8.00830099436882,7.7805623254954,5.44431325547661,1.39893480524502,7.3927574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| |||
|short_description=p@chr12:66037894..66037897,- | |||
}} |
Revision as of 14:26, 11 January 2014
Short description: | p@chr12:66037894..66037897, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:66037894..66037897, - |
Coexpression cluster: | C1614_Fibroblast_Small_Bronchial_Mallassezderived_Tracheal_Sebocyte_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.55e-21 | 58 |
myoblast | 7.55e-21 | 58 |
multi-potent skeletal muscle stem cell | 7.55e-21 | 58 |
muscle cell | 2.03e-17 | 55 |
embryonic cell | 7.39e-16 | 250 |
electrically responsive cell | 7.74e-15 | 61 |
electrically active cell | 7.74e-15 | 61 |
general ecto-epithelial cell | 7.34e-13 | 14 |
smooth muscle cell | 7.96e-13 | 43 |
smooth muscle myoblast | 7.96e-13 | 43 |
respiratory epithelial cell | 5.89e-12 | 13 |
vascular associated smooth muscle cell | 3.21e-11 | 32 |
mesenchymal stem cell of the bone marrow | 3.67e-11 | 6 |
fibroblast of dermis | 7.37e-11 | 6 |
endo-epithelial cell | 2.72e-09 | 42 |
epithelial cell of tracheobronchial tree | 2.74e-09 | 9 |
epithelial cell of lower respiratory tract | 2.74e-09 | 9 |
cell of skeletal muscle | 1.73e-08 | 9 |
mesodermal cell | 2.71e-08 | 121 |
skeletal muscle myoblast | 8.67e-08 | 4 |
somatic stem cell | 4.87e-07 | 433 |
cardiac mesenchymal cell | 5.39e-07 | 4 |
migratory trunk neural crest cell | 5.39e-07 | 4 |
transitional epithelial cell | 6.13e-07 | 4 |
urothelial cell | 6.13e-07 | 4 |
bronchial epithelial cell | 8.51e-07 | 3 |