FFCP PHASE1:Hg19::chr15:50406680..50406709,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79895 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13536 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000559829_5end | |||
|coexpression_cluster_id=C132 | |||
|description=CAGE_peak_7_at_ATP8B4_5end | |||
|id=chr15:50406680..50406709,- | |||
|ontology_enrichment_celltype=CL:0000763!2.72e-34!112;CL:0000049!2.72e-34!112;CL:0002009!1.09e-29!65;CL:0000766!3.29e-29!76;CL:0002194!1.20e-27!63;CL:0000576!1.20e-27!63;CL:0000040!1.20e-27!63;CL:0000559!1.20e-27!63;CL:0000557!1.59e-27!71;CL:0000839!1.94e-23!70;CL:0000037!3.98e-20!172;CL:0000566!3.98e-20!172;CL:0002032!2.17e-19!165;CL:0000837!2.17e-19!165;CL:0002057!1.15e-18!42;CL:0000988!8.02e-18!182;CL:0000860!8.87e-17!45;CL:0000738!6.40e-15!140;CL:0002087!6.39e-13!119;CL:0002031!2.55e-11!124 | |||
|ontology_enrichment_celltype_v019=CL:0000766;1.09e-12;69!CL:0000576;3.49e-12;48!CL:0000775;5.80e-12;3!CL:0002619;9.55e-12;3!CL:0000763;1.01e-11;100!CL:0000473;1.34e-09;39!CL:0000234;1.34e-09;39!CL:0000860;1.13e-07;33!CL:0002057;1.13e-07;33!CL:0000094;1.34e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,8.76e-37,108;CL:0000049,8.76e-37,108;CL:0000766,3.25e-23,72;CL:0002032,1.26e-21,161;CL:0000837,1.26e-21,161;CL:0002009,4.22e-21,61;CL:0000557,9.26e-21,67;CL:0000037,2.44e-20,168;CL:0002194,9.16e-20,59;CL:0000576,9.16e-20,59;CL:0000040,9.16e-20,59;CL:0000559,9.16e-20,59;CL:0000988,7.77e-19,177;CL:0000839,3.84e-17,66;CL:0000775,5.52e-12,3;CL:0002619,9.09e-12,3;CL:0000738,1.74e-10,136;CL:0000473,3.17e-10,48;CL:0000234,3.17e-10,48;CL:0002031,3.37e-08,120;CL:0002087,8.84e-08,115;CL:0000094,1.25e-07,8;CL:0000860,4.11e-07,42;CL:0002057,4.11e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.15e-10;3!UBERON:0003057;1.15e-10;3!CL:0000049;3.22e-10;108!UBERON:0010122;2.21e-07;2 | |||
|ontology_enrichment_disease=DOID:8692!1.68e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.67e-18;31!DOID:1240;1.14e-11;39!DOID:2531;5.87e-07;51!DOID:0060083;5.87e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.12e-19,31;DOID:1240,1.38e-14,39;DOID:2531,2.24e-10,51;DOID:0060083,2.24e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.01e-39!115;UBERON:0002390!5.35e-28!102;UBERON:0003061!5.35e-28!102;UBERON:0002193!6.88e-26!112;UBERON:0002371!1.07e-22!80;UBERON:0001049!5.40e-21!57;UBERON:0005068!5.40e-21!57;UBERON:0006241!5.40e-21!57;UBERON:0007135!5.40e-21!57;UBERON:0001474!4.60e-20!86;UBERON:0002405!1.67e-17!115;UBERON:0003080!1.53e-16!42;UBERON:0004765!8.22e-16!101;UBERON:0001434!8.22e-16!101;UBERON:0002780!1.05e-15!41;UBERON:0001890!1.05e-15!41;UBERON:0006240!1.05e-15!41;UBERON:0002616!1.10e-15!59;UBERON:0003075!4.02e-15!86;UBERON:0007284!4.02e-15!86;UBERON:0002346!1.20e-14!90;UBERON:0001893!7.07e-13!34;UBERON:0002020!8.97e-13!34;UBERON:0003528!8.97e-13!34;UBERON:0001017!1.23e-12!82;UBERON:0000955!1.27e-12!69;UBERON:0006238!1.27e-12!69;UBERON:0005743!2.94e-12!86;UBERON:0002791!4.36e-12!33;UBERON:0001869!4.84e-11!32;UBERON:0002308!8.81e-11!9;UBERON:0000125!8.81e-11!9;UBERON:0003056!2.58e-10!61;UBERON:0000073!4.66e-10!94;UBERON:0001016!4.66e-10!94;UBERON:0009663!6.22e-09!7;UBERON:0002420!9.30e-09!9;UBERON:0007245!9.30e-09!9;UBERON:0010009!9.30e-09!9;UBERON:0010011!9.30e-09!9;UBERON:0000454!9.30e-09!9;UBERON:0003081!6.79e-08!216;UBERON:0002298!1.10e-07!8;UBERON:0002619!4.31e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.15e-10;3!UBERON:0005174;1.15e-10;3!UBERON:0001137;1.15e-10;3!UBERON:0002420;6.85e-09;9!UBERON:0000125;6.85e-09;9!UBERON:0007245;6.85e-09;9!UBERON:0002308;6.85e-09;9!UBERON:0010009;6.85e-09;9!UBERON:0010011;6.85e-09;9!UBERON:0000454;6.85e-09;9!UBERON:0009663;1.12e-07;7!UBERON:0001873;2.21e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.21e-17,76;UBERON:0001474,6.01e-16,82;UBERON:0002390,3.85e-15,98;UBERON:0003061,3.85e-15,98;UBERON:0004765,4.86e-14,90;UBERON:0002405,2.07e-13,93;UBERON:0002193,3.49e-13,108;UBERON:0001434,4.32e-12,100;UBERON:0002240,9.60e-11,3;UBERON:0005174,9.60e-11,3;UBERON:0001137,9.60e-11,3;UBERON:0001049,1.16e-09,56;UBERON:0005068,1.16e-09,56;UBERON:0006241,1.16e-09,56;UBERON:0007135,1.16e-09,56;UBERON:0000125,3.18e-09,9;UBERON:0002308,3.18e-09,9;UBERON:0002420,3.73e-09,9;UBERON:0007245,3.73e-09,9;UBERON:0010009,3.73e-09,9;UBERON:0010011,3.73e-09,9;UBERON:0000454,3.73e-09,9;UBERON:0009663,6.49e-08,7;UBERON:0001873,1.48e-07,2;UBERON:0010122,1.48e-07,2;UBERON:0003076,1.91e-07,15;UBERON:0003057,1.91e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.464448369948228,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.802177789880567,1.08505435357926,5.37397138175818,3.88672399222775,5.40908692031792,0.145398238779565,0.755751887377619,0.242584061187816,0.464858073811369,1.23350366406548,1.85823822537062,0.575384784644301,0.256160706529101,0.709446689665756,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,0,0,1.22433556948361,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0,0.502497330513487,0,2.6062661364614,0,1.10483290796269,1.26584954976354,0.845021145247767,0.637812899895131,0.838634582033504,1.46027220490444,2.55300717830561,2.25015821375912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0.649094787309367,0.696518949197069,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8032843165447,0.468008530278475,3.41851673264075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,7.49007023947182,5.9832291840805,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0,1.70894156152249,1.66762242820452,0.822724546172388,0.648473311192717,0,0,0,0,0,0,0,0,0,0,2.68107518185313,0.846694330895531,1.29848776109822,4.49275484981534,3.42352018549788,1.72347885350326,0,0,2.24823305145179,8.475587702024,2.12923118845163,1.71752672377882,22.121335030209,24.1570196523809,23.8594272648029,2.34465714482448,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,1.68803299692615,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,5.11572370226872,0.295930216910801,0,0,0,0.927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,1.5677537021303,0,0.331737779793674,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,1.21322039365219,0.802577647298789,0.468528891450678,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.823040347426423,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.9166753044879,2.55493176133945,0,0,1.39641200636127,0.458320848023367,0.717873024576814,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,2.45166131000836,0,0,0,3.37460837327251,0.77380195455795,0.789744236554321,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,1.98348902614035,0,0,0.427149650270779,0.628817220398664,2.07119527673598,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0.751145584238999,0,2.5513681853476,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,7.25503761920158,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.449604575675217,1.41696576325585,0.319267718114302,0.41023272848151,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.675375846183947,0,0.620060389503552,0.570742291745161,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.177404740325278,0,0,0.679697329768317,0.328863867814245,0,0,0.235479278551542,0.471346769748006,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.385870790539723,0.437119121007915,0,0.245148321753905,0,1.57046773691956,3.26751040359795,1.6906229103336,0,0.751871343838829,0.257831551894309,0.0999411559249289,0,0,0,0,0,2.72345207987757,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,4.13731983447581,0.213233981900981,0.23806443146374,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.26940821205835,0.286888821570705,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p7@ATP8B4 | |||
}} |
Revision as of 23:28, 11 January 2014
Short description: | p7@ATP8B4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ATP8B4_5end |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | 0bp_to_ENST00000559829_5end |
EntrezGene: | ATP8B4 |
HGNC: | 13536 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 8.76e-37 | 108 |
common myeloid progenitor | 8.76e-37 | 108 |
myeloid leukocyte | 3.25e-23 | 72 |
hematopoietic oligopotent progenitor cell | 1.26e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.26e-21 | 161 |
macrophage dendritic cell progenitor | 4.22e-21 | 61 |
granulocyte monocyte progenitor cell | 9.26e-21 | 67 |
hematopoietic stem cell | 2.44e-20 | 168 |
monopoietic cell | 9.16e-20 | 59 |
monocyte | 9.16e-20 | 59 |
monoblast | 9.16e-20 | 59 |
promonocyte | 9.16e-20 | 59 |
hematopoietic cell | 7.77e-19 | 177 |
myeloid lineage restricted progenitor cell | 3.84e-17 | 66 |
neutrophil | 5.52e-12 | 3 |
adult endothelial progenitor cell | 9.09e-12 | 3 |
leukocyte | 1.74e-10 | 136 |
defensive cell | 3.17e-10 | 48 |
phagocyte | 3.17e-10 | 48 |
hematopoietic lineage restricted progenitor cell | 3.37e-08 | 120 |
nongranular leukocyte | 8.84e-08 | 115 |
granulocyte | 1.25e-07 | 8 |
classical monocyte | 4.11e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.11e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.21e-17 | 76 |
bone element | 6.01e-16 | 82 |
hematopoietic system | 3.85e-15 | 98 |
blood island | 3.85e-15 | 98 |
skeletal element | 4.86e-14 | 90 |
immune system | 2.07e-13 | 93 |
hemolymphoid system | 3.49e-13 | 108 |
skeletal system | 4.32e-12 | 100 |
spinal cord | 9.60e-11 | 3 |
dorsal region element | 9.60e-11 | 3 |
dorsum | 9.60e-11 | 3 |
neural tube | 1.16e-09 | 56 |
neural rod | 1.16e-09 | 56 |
future spinal cord | 1.16e-09 | 56 |
neural keel | 1.16e-09 | 56 |
neural nucleus | 3.18e-09 | 9 |
nucleus of brain | 3.18e-09 | 9 |
basal ganglion | 3.73e-09 | 9 |
nuclear complex of neuraxis | 3.73e-09 | 9 |
aggregate regional part of brain | 3.73e-09 | 9 |
collection of basal ganglia | 3.73e-09 | 9 |
cerebral subcortex | 3.73e-09 | 9 |
telencephalic nucleus | 6.49e-08 | 7 |
caudate nucleus | 1.48e-07 | 2 |
future caudate nucleus | 1.48e-07 | 2 |
posterior neural tube | 1.91e-07 | 15 |
chordal neural plate | 1.91e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.12e-19 | 31 |
leukemia | 1.38e-14 | 39 |
hematologic cancer | 2.24e-10 | 51 |
immune system cancer | 2.24e-10 | 51 |