FFCP PHASE1:Hg19::chr4:40632881..40632913,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54502 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30358 | |||
|TSSclassifier=strong | |||
|UniProt=D6RBP6 | |||
|association_with_transcript=0bp_to_ENST00000511598_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_5_at_RBM47_5end | |||
|id=chr4:40632881..40632913,- | |||
|ontology_enrichment_celltype=CL:0000738!8.23e-44!140;CL:0000766!8.09e-42!76;CL:0002009!3.87e-39!65;CL:0002194!1.09e-37!63;CL:0000576!1.09e-37!63;CL:0000040!1.09e-37!63;CL:0000559!1.09e-37!63;CL:0000557!4.17e-37!71;CL:0002057!1.52e-35!42;CL:0002087!1.28e-34!119;CL:0000860!4.78e-34!45;CL:0000839!3.39e-33!70;CL:0000037!4.48e-33!172;CL:0000566!4.48e-33!172;CL:0002031!4.46e-31!124;CL:0002032!5.32e-30!165;CL:0000837!5.32e-30!165;CL:0000988!1.61e-29!182;CL:0000763!4.89e-29!112;CL:0000049!4.89e-29!112;CL:0000451!3.34e-09!10;CL:0000094!3.41e-08!8;CL:0002393!4.06e-08!9;CL:0002397!4.06e-08!9;CL:0000990!1.06e-07!8;CL:0000945!5.39e-07!24;CL:0000826!5.39e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.43e-40;33!CL:0002057;7.43e-40;33!CL:0000473;1.55e-39;39!CL:0000234;1.55e-39;39!CL:0000576;1.66e-34;48!CL:0000766;2.23e-27;69!CL:0002087;1.92e-15;104!CL:0000738;2.06e-14;136!CL:0000763;1.47e-13;100!CL:0000451;2.24e-13;10!CL:0000094;7.14e-12;8!CL:0000990;4.73e-11;8!CL:0000235;9.86e-09;6!CL:0000988;1.80e-08;177!CL:0002393;1.87e-08;6!CL:0002397;1.87e-08;6!CL:0000945;2.77e-08;24!CL:0000081;4.83e-08;11!CL:0000840;6.62e-08;5!CL:0000453;7.95e-07;5!CL:0000219;8.77e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.48e-67,72;CL:0002009,1.71e-65,61;CL:0000738,1.29e-64,136;CL:0002194,3.28e-63,59;CL:0000576,3.28e-63,59;CL:0000040,3.28e-63,59;CL:0000559,3.28e-63,59;CL:0000473,4.88e-62,48;CL:0000234,4.88e-62,48;CL:0000557,4.78e-60,67;CL:0000860,1.81e-54,42;CL:0002057,1.81e-54,42;CL:0000839,2.28e-54,66;CL:0000037,4.22e-53,168;CL:0000763,1.13e-51,108;CL:0000049,1.13e-51,108;CL:0002087,2.51e-51,115;CL:0000988,8.60e-49,177;CL:0002032,5.63e-48,161;CL:0000837,5.63e-48,161;CL:0002031,3.20e-45,120;CL:0000451,2.02e-13,10;CL:0000094,7.37e-12,8;CL:0002393,9.67e-12,9;CL:0002397,9.67e-12,9;CL:0000990,4.24e-11,8;CL:0000134,6.39e-11,354;CL:0002320,3.21e-10,361;CL:0000235,1.03e-08,6;CL:0000945,2.43e-08,24;CL:0000826,2.43e-08,24;CL:0000081,4.93e-08,11;CL:0000840,5.95e-08,5;CL:0001029,5.95e-08,5;CL:0000219,7.91e-08,386;CL:0000453,7.65e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;6.19e-39;42!CL:0000049;1.98e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.94e-38!102;UBERON:0003061!1.94e-38!102;UBERON:0002193!3.48e-34!112;UBERON:0002371!6.24e-31!80;UBERON:0007023!2.52e-29!115;UBERON:0001474!1.05e-27!86;UBERON:0002405!6.69e-23!115;UBERON:0004765!1.61e-21!101;UBERON:0001434!1.61e-21!101;UBERON:0003081!2.79e-09!216;UBERON:0001049!1.56e-07!57;UBERON:0005068!1.56e-07!57;UBERON:0006241!1.56e-07!57;UBERON:0007135!1.56e-07!57;UBERON:0000178!5.01e-07!15;UBERON:0000179!5.01e-07!15;UBERON:0000463!5.01e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.19e-11;15!UBERON:0000179;5.19e-11;15!UBERON:0000463;5.19e-11;15!UBERON:0002390;1.84e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.89e-62,98;UBERON:0003061,1.89e-62,98;UBERON:0002193,1.31e-57,108;UBERON:0002371,3.60e-52,76;UBERON:0002405,8.53e-47,93;UBERON:0001474,8.55e-47,82;UBERON:0004765,9.30e-41,90;UBERON:0001434,1.34e-34,100;UBERON:0003081,6.56e-25,203;UBERON:0002204,6.90e-15,167;UBERON:0007023,1.63e-12,114;UBERON:0000926,4.74e-11,315;UBERON:0004120,4.74e-11,315;UBERON:0006603,4.74e-11,315;UBERON:0000178,5.68e-11,15;UBERON:0000179,5.68e-11,15;UBERON:0000463,5.68e-11,15;UBERON:0002384,1.04e-09,371;UBERON:0000479,4.02e-07,773 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97349709889347,3.9408282935974,4.40780375356604,8.26064981382698,6.90892916574983,9.44378352228064,0,0,0,0,0,1.46800219667424,11.0799081706375,12.6343001906189,12.1526087600877,21.0480545785529,18.4619389630818,17.7727141667589,10.1778767145695,10.2026504795979,10.9162827534517,13.9457422143411,15.6243797448294,13.9367866902797,27.3307772706043,25.8722313594392,18.9185783910868,20.6847408441971,14.846147722428,14.8969135253776,8.84738995850242,7.91427835167753,9.66310983113864,21.1197885735923,16.3673803808808,15.983428144976,26.3881040149373,26.3292028060554,23.0161365287655,17.9929727949722,14.1846306172785,21.1759564658495,22.3611312078501,23.4667313289091,19.1126183340503,13.9241885605675,18.4138817993782,18.3548184715713,8.23895616616573,10.6302149982522,10.6925909209272,17.0739519342673,13.5159203557356,15.7511074963139,13.3955989558387,6.96208370196815,9.6812001495256,1.75996244461323,1.63841583378639,0.889509253863555,2.98711155796555,0.800791974072025,4.02326707968138,1.98313461835459,0,1.1384259382189,2.34894875748376,2.29363936875137,0,3.92355994087075,0.790152254325231,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.752875595388864,0.255973222308837,3.74792179657038,1.65744076430812,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,1.17881167947941,0,0,7.7891374477124,8.53235712766409,5.85015026283007,12.8784937124885,11.4398982156026,12.6295550452052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.9916918359339,54.2892369807656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0.609868530647977,0.132529768321485,0.580969714347592,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,23.6368325843901,9.82817913584798,10.5528125224997,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0.207328115540772,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.378615870531,18.0812552915566,6.32501818449095,0,0,0,0,0,0,0,0.788123040807709,0.431255149719035,0.256686072559497,0,0,0,0,0,53.17949870025,50.8574480646842,66.3064821497657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37596867919507,5.60856922128404,5.44310544797566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,2.92278449306521,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.769350375349168,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,1.41215701165169,0,0,0,0.229723400206959,6.08937131078603,6.117097657139,14.2411796793541,9.05280746739598,10.2840568271549,17.5087794022034,7.56044012133361,15.8625035258854,0.213648142254946,0,0,1.85803175125719,0,0,0,0,0.766021480529467,0,0,0,0,0,0,0,4.01470187759249,3.63239472943886,1.70338495076131,0,0,0,0,0,0,0,0,0,0,0.18714054040822,2.78365540616599,0,0,0,0,0.296964680832639,0.307160702099232,0.994147647766298,1.1253553312841,0,0,0,1.19548792950642,2.21027132424918,0.503865495708552,0,5.16956182936492,0,0.269605053441981,0.537063524026827,0,0.986434056369336,11.974154617347,0,0,0.74214478529481,0,0,0.0874599999961957,0,0.227586896570999,0,0.236387681767936,0,0,0,1.77148277162768,1.20596438625408,0,0.331737779793674,0.886642856860642,0.219385397153973,0.10893846351899,0.278847488557207,0.307801034015188,0,0.23056390438806,0.628303510868405,0.108647371922008,0.638002319463839,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.973033209536731,0,0,0,0,1.55022605855557,1.60515529459758,0,1.094728735294,0,0,1.97292201424695,0,0.30607276163049,4.04394109622323,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0.873633341210151,0,0.290268993867255,0.146178634172371,0,0.484945082442097,0.441280633457501,0.225980740780532,0,0,0.316553979779393,0.391102765469606,0.480952921509202,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.23214841002794,6.38732940334862,0,0,1.11712960508902,1.14580212005842,1.43574604915363,0.399358000997982,0,1.56220020209311,0.201550417460179,0,0,0,0,0,0.295282444544246,1.52411997718412,1.59045937961861,1.90684768556206,0.321506296930038,0.275078873194468,0,8.32403398740552,6.96421759102155,0.485996453264197,0,0.551639951094387,0.367182116944987,0,0,0,3.57347663186684,2.64836788146173,0,0,0.864221491201268,0,0,0,0,0,0.439656701034247,1.32506888912221,0.517131825446202,1.19009341568421,0,0,2.45611048905698,1.10043013569766,4.14239055347196,3.96932817449561,0,0.121792598380896,0,0,0.2506898940227,0,0,0.157054096250234,0.886068179966986,0.488105059607853,0.876336514945499,1.14681839138014,1.44207766997908,1.73869928235874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| |||
|short_description=p5@RBM47 | |||
}} |
Revision as of 00:49, 22 January 2014
Short description: | p5@RBM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RBM47_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000511598_5end |
EntrezGene: | RBM47 |
HGNC: | 30358 |
UniProt: | D6RBP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.89e-62 | 98 |
blood island | 1.89e-62 | 98 |
hemolymphoid system | 1.31e-57 | 108 |
bone marrow | 3.60e-52 | 76 |
immune system | 8.53e-47 | 93 |
bone element | 8.55e-47 | 82 |
skeletal element | 9.30e-41 | 90 |
skeletal system | 1.34e-34 | 100 |
lateral plate mesoderm | 6.56e-25 | 203 |
musculoskeletal system | 6.90e-15 | 167 |
adult organism | 1.63e-12 | 114 |
mesoderm | 4.74e-11 | 315 |
mesoderm-derived structure | 4.74e-11 | 315 |
presumptive mesoderm | 4.74e-11 | 315 |
blood | 5.68e-11 | 15 |
haemolymphatic fluid | 5.68e-11 | 15 |
organism substance | 5.68e-11 | 15 |
connective tissue | 1.04e-09 | 371 |
tissue | 4.02e-07 | 773 |