FFCP PHASE1:Hg19::chr4:106066730..106066754,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25941 | |||
|TSSclassifier=weak | |||
|UniProt=Q6N021 | |||
|association_with_transcript=-277bp_to_ENST00000305737,NM_017628_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_TET2_5end | |||
|id=chr4:106066730..106066754,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.59e-78!42;CL:0000860!2.48e-72!45;CL:0000766!1.63e-70!76;CL:0000738!1.40e-67!140;CL:0000557!1.83e-61!71;CL:0000839!2.12e-59!70;CL:0000037!1.80e-57!172;CL:0000566!1.80e-57!172;CL:0000763!2.98e-57!112;CL:0000049!2.98e-57!112;CL:0002009!4.36e-57!65;CL:0002194!1.10e-53!63;CL:0000576!1.10e-53!63;CL:0000040!1.10e-53!63;CL:0000559!1.10e-53!63;CL:0000988!4.39e-53!182;CL:0002032!7.49e-52!165;CL:0000837!7.49e-52!165;CL:0002031!1.38e-50!124;CL:0002087!6.42e-46!119;CL:0000134!2.67e-18!358;CL:0002320!1.58e-17!365;CL:0002393!2.25e-17!9;CL:0002397!2.25e-17!9;CL:0000219!8.10e-15!390;CL:0000094!1.91e-12!8;CL:0000034!1.03e-11!444;CL:0000048!1.28e-11!430;CL:0000723!3.61e-11!436;CL:0000451!6.70e-09!10;CL:0000453!8.33e-09!5;CL:0000081!1.14e-08!11;CL:0000990!1.26e-08!8;CL:0000767!5.17e-07!3;CL:0000842!7.10e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.07e-86;33!CL:0002057;9.07e-86;33!CL:0000576;6.96e-63;48!CL:0000473;9.53e-58;39!CL:0000234;9.53e-58;39!CL:0000766;4.45e-53;69!CL:0000763;2.94e-21;100!CL:0002393;1.90e-20;6!CL:0002397;1.90e-20;6!CL:0000094;2.29e-20;8!CL:0002087;2.15e-19;104!CL:0000738;4.96e-16;136!CL:0000081;1.60e-14;11!CL:0000767;6.97e-11;3!CL:0000226;1.25e-10;3!CL:0000842;1.25e-10;3!CL:0000875;9.24e-10;3!CL:0002396;9.24e-10;3!CL:0000988;1.24e-09;177!CL:0000771;6.09e-08;2!CL:0001014;1.03e-07;2!CL:0001016;1.03e-07;2!CL:0000219;2.41e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.54e-121,42;CL:0002057,2.54e-121,42;CL:0000766,1.48e-106,72;CL:0000473,6.89e-105,48;CL:0000234,6.89e-105,48;CL:0000557,1.97e-91,67;CL:0002009,1.28e-87,61;CL:0000839,2.77e-84,66;CL:0002194,7.01e-82,59;CL:0000576,7.01e-82,59;CL:0000040,7.01e-82,59;CL:0000559,7.01e-82,59;CL:0000763,8.67e-74,108;CL:0000049,8.67e-74,108;CL:0000738,7.00e-72,136;CL:0000037,5.47e-56,168;CL:0002031,1.25e-53,120;CL:0000988,1.51e-52,177;CL:0002032,5.66e-52,161;CL:0000837,5.66e-52,161;CL:0002087,3.06e-51,115;CL:0002393,1.79e-28,9;CL:0002397,1.79e-28,9;CL:0000094,2.19e-20,8;CL:0000134,3.05e-20,354;CL:0002320,1.31e-19,361;CL:0000219,2.18e-17,386;CL:0000048,1.14e-14,427;CL:0000081,1.55e-14,11;CL:0000723,2.72e-14,433;CL:0000034,8.31e-14,441;CL:0000767,7.71e-11,3;CL:0000226,1.32e-10,3;CL:0000842,1.32e-10,3;CL:0000875,9.25e-10,3;CL:0002396,9.25e-10,3;CL:0000771,5.40e-08,2;CL:0001014,1.07e-07,2;CL:0001016,1.07e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-85;42!CL:0000049;1.04e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.55e-64!102;UBERON:0003061!9.55e-64!102;UBERON:0002193!3.18e-58!112;UBERON:0002371!4.42e-55!80;UBERON:0001474!3.93e-50!86;UBERON:0002405!5.85e-41!115;UBERON:0004765!2.48e-40!101;UBERON:0001434!2.48e-40!101;UBERON:0003081!4.71e-25!216;UBERON:0002204!2.52e-18!167;UBERON:0002384!1.78e-16!375;UBERON:0000178!7.52e-07!15;UBERON:0000179!7.52e-07!15;UBERON:0000463!7.52e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.80e-79,76;UBERON:0002390,8.71e-75,98;UBERON:0003061,8.71e-75,98;UBERON:0001474,6.15e-73,82;UBERON:0002193,7.17e-67,108;UBERON:0004765,1.45e-65,90;UBERON:0002405,3.99e-63,93;UBERON:0001434,5.41e-58,100;UBERON:0002204,1.62e-30,167;UBERON:0003081,2.34e-30,203;UBERON:0002384,9.47e-19,371;UBERON:0000926,1.65e-15,315;UBERON:0004120,1.65e-15,315;UBERON:0006603,1.65e-15,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.47392126012918,6.1412703695554,4.02521920621798,0,0,0,0,0,0.587200878669695,17.1738576644882,8.62341124121609,15.6247826915413,0,0,0,2.03557534291391,1.88937971844405,0.485168122375632,5.57829688573643,4.93401465626191,6.50383378879718,4.02769349251011,6.40401766322752,9.69577142543199,18.961012440514,13.5551783552603,28.4395621848118,3.01187743268168,2.18324920046277,3.37085226667627,26.6292986362685,19.5766706516417,38.9995646737415,0.989553900560148,3.39088217956774,2.98357325372886,11.6083695451434,7.37600792098482,8.09668923694247,9.54744927975624,7.82224377630302,12.8141418376019,7.87019353423379,7.73383035573886,10.7597211729901,2.5350634357433,7.22854619881148,3.56419697364239,6.06574608191074,5.10601435661121,4.018139667427,1.71007646244749,1.79025009479181,2.19196984517561,0,0,0,0.853460445133014,0,0,0,0,0,1.76171156811282,0.764546456250458,0,0.560508562981536,0.526768169550154,0.590129310341499,0,0.822405995998037,0,0.32592226663359,0.473447805734733,0,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0.301150238155546,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,3.31724984865235,4.4677185559258,4.54472760334968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,0,1.02674429023799,0,0,0,0,0,5.99205619157746,0,11.603634376209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,6.03999762292127,5.12292277456533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0.238231775457789,2.87953591160336,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.249738915515,9.2856234546954,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80713731262336,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.128915775947154,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@TET2 | |||
}} |
Revision as of 02:35, 22 January 2014
Short description: | p6@TET2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TET2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -277bp_to_ENST00000305737, NM_017628_5end |
EntrezGene: | TET2 |
HGNC: | 25941 |
UniProt: | Q6N021 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.80e-79 | 76 |
hematopoietic system | 8.71e-75 | 98 |
blood island | 8.71e-75 | 98 |
bone element | 6.15e-73 | 82 |
hemolymphoid system | 7.17e-67 | 108 |
skeletal element | 1.45e-65 | 90 |
immune system | 3.99e-63 | 93 |
skeletal system | 5.41e-58 | 100 |
musculoskeletal system | 1.62e-30 | 167 |
lateral plate mesoderm | 2.34e-30 | 203 |
connective tissue | 9.47e-19 | 371 |
mesoderm | 1.65e-15 | 315 |
mesoderm-derived structure | 1.65e-15 | 315 |
presumptive mesoderm | 1.65e-15 | 315 |