FFCP PHASE1:Hg19::chr6:137105206..137105220,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:137105206..137105220,+ | |||
|id=chr6:137105206..137105220,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.49e-75!172;CL:0000566!5.49e-75!172;CL:0002032!2.17e-70!165;CL:0000837!2.17e-70!165;CL:0000763!4.10e-69!112;CL:0000049!4.10e-69!112;CL:0000988!1.55e-68!182;CL:0000738!1.67e-55!140;CL:0000766!2.85e-55!76;CL:0002194!4.91e-51!63;CL:0000576!4.91e-51!63;CL:0000040!4.91e-51!63;CL:0000559!4.91e-51!63;CL:0002087!6.32e-51!119;CL:0002009!1.76e-50!65;CL:0000839!2.85e-50!70;CL:0002031!1.00e-49!124;CL:0000557!1.33e-47!71;CL:0002057!5.60e-39!42;CL:0000860!2.74e-35!45;CL:0000134!1.20e-16!358;CL:0002320!1.21e-15!365;CL:0000219!3.37e-12!390;CL:0000945!8.83e-11!24;CL:0000826!8.83e-11!24;CL:0002393!5.37e-10!9;CL:0002397!5.37e-10!9;CL:0000048!2.56e-09!430;CL:0000723!9.32e-09!436;CL:0000034!2.08e-08!444;CL:0000094!4.03e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.20e-42;39!CL:0000234;1.20e-42;39!CL:0000860;1.07e-38;33!CL:0002057;1.07e-38;33!CL:0000576;1.02e-35;48!CL:0000766;7.20e-33;69!CL:0000763;2.40e-30;100!CL:0000235;5.09e-14;6!CL:0000738;1.34e-13;136!CL:0002087;9.63e-13;104!CL:0000988;1.88e-12;177!CL:0002393;2.96e-11;6!CL:0002397;2.96e-11;6!CL:0000094;6.26e-09;8!CL:0000775;1.92e-07;3!CL:0000875;7.98e-07;3!CL:0002396;7.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.63e-92,108;CL:0000049,1.63e-92,108;CL:0000037,2.02e-79,168;CL:0000766,2.99e-78,72;CL:0002194,4.45e-77,59;CL:0000576,4.45e-77,59;CL:0000040,4.45e-77,59;CL:0000559,4.45e-77,59;CL:0002032,8.23e-76,161;CL:0000837,8.23e-76,161;CL:0000988,2.85e-74,177;CL:0002009,4.40e-74,61;CL:0000473,8.07e-71,48;CL:0000234,8.07e-71,48;CL:0000839,2.21e-67,66;CL:0000557,3.69e-66,67;CL:0000860,3.08e-58,42;CL:0002057,3.08e-58,42;CL:0000738,3.21e-58,136;CL:0002087,1.55e-54,115;CL:0002031,5.67e-48,120;CL:0000134,4.70e-26,354;CL:0002320,4.06e-25,361;CL:0000219,7.97e-22,386;CL:0000048,8.27e-18,427;CL:0000723,2.96e-17,433;CL:0000034,1.53e-16,441;CL:0002393,3.18e-16,9;CL:0002397,3.18e-16,9;CL:0000235,5.54e-14,6;CL:0000094,5.72e-09,8;CL:0000775,1.85e-07,3;CL:0000875,8.42e-07,3;CL:0002396,8.42e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.39e-41;42!CL:0000049;8.34e-27;108 | |||
|ontology_enrichment_disease=DOID:8692!6.86e-19!31;DOID:2531!9.57e-19!51;DOID:0060083!9.57e-19!51;DOID:1240!9.82e-17!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.02e-25;31!DOID:1240;1.39e-16;39!DOID:2531;5.42e-12;51!DOID:0060083;5.42e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.00e-26,31;DOID:2531,1.40e-20,51;DOID:0060083,1.40e-20,51;DOID:1240,6.81e-20,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.84e-51!102;UBERON:0003061!3.84e-51!102;UBERON:0002193!4.51e-47!112;UBERON:0002371!1.86e-42!80;UBERON:0001474!7.07e-38!86;UBERON:0002405!1.87e-32!115;UBERON:0004765!6.79e-29!101;UBERON:0001434!6.79e-29!101;UBERON:0002384!6.96e-15!375;UBERON:0003081!1.42e-13!216;UBERON:0002204!3.89e-11!167;UBERON:0007023!4.96e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.73e-07;15!UBERON:0000179;7.73e-07;15!UBERON:0000463;7.73e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.02e-61,98;UBERON:0003061,2.02e-61,98;UBERON:0002193,3.15e-58,108;UBERON:0002371,1.34e-56,76;UBERON:0002405,5.57e-52,93;UBERON:0001474,2.19e-51,82;UBERON:0004765,1.63e-45,90;UBERON:0001434,1.71e-39,100;UBERON:0002384,9.10e-25,371;UBERON:0003081,5.97e-21,203;UBERON:0002204,6.42e-18,167;UBERON:0000926,4.33e-08,315;UBERON:0004120,4.33e-08,315;UBERON:0006603,4.33e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59805579543034,1.88831355734875,3.30585281517453,2.36018566109342,0.767658796194425,2.63187409637329,0,0,0,0.309868802321207,2.98555388223585,0.293600439334847,1.10799081706375,1.60435557976113,1.30206522429511,0.223915474239924,0.647787332037959,0.515151135268373,5.37973483484389,2.26725566213286,3.88134497900506,3.0215774797739,1.23350366406548,2.16794459626573,2.01384674625505,0.768482119587302,1.6553756092201,2.41321976515633,1.93645405075148,1.35426486594342,3.9530891303947,1.63743690034707,1.57306439111559,4.89734227793444,1.60464513538047,2.55734850319616,1.64925650093358,3.39088217956774,1.70489900213078,3.19230162491442,0,1.24564449799115,2.00998932205395,0.521482918420201,0.434377689410233,2.42159801053347,2.57794345191295,2.21523671208619,3.38008458099107,3.4016687994407,2.30624510059213,4.71780250815279,4.50530678524519,6.58974905458029,2.56511469367124,3.77941686678271,2.00930569141097,0,0.546138611262131,0.889509253863555,0.426730222566507,2.40237592221607,1.14950487990897,0,0,0.569212969109448,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,19.7973910129357,15.1492871450362,28.9848353931126,1.43094374583205,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.12516120088411,21.2943881276706,12.3363864699644,0,0,0,0,0,0,0.985326475791887,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,4.01805673145701,12.6500363689819,0,0,0,0,0,0,0.560425719967636,0.197030760201927,0,0.256686072559497,0,0,0,0.167516265334349,0,3.74503511973591,5.9832291840805,6.21623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.862856803274467,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,2.53723804616085,0.764637207142375,2.84823593587081,2.38231775457789,2.05681136543097,1.29694662238543,1.08006287447623,0,0,0,0,0,0.432807638929335,0.142283686696828,0,1.79621434289535,4.21311814291207,4.86849240264931,3.89546328329467,3.36956613736151,7.07527505002896,1.25343916618419,5.01268954180134,0.677167111206413,1.605880751037,4.43959355820305,1.70338495076131,4.46556948182494,7.37377834340299,11.4074815025132,12.5136856283931,7.22935952987549,0,0,8.65458171123146,0.99921590399346,1.4098700508785,0,2.3441308683503,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,7.01583391128096,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,2.19772358953035,1.49590513710141,0,0.19606253431774,0,0,1.90723894776454,0,0,0,0,0,0,0,0,0,0,0.876214728748802,0,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,16.6806464169595,0,0.136203406111576,0,0,0,0.2249738915515,0,0.182248669974074,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.06720276974141,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.213574825135389,0.628817220398664,1.24271716604159,1.9846640872478,0,1.70509637733254,0,0,0,0,0,0,0.886068179966986,0,0,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,7.89518799736642,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0,0.317079050969534,0,0,0,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0,0.339848664884159,0.328863867814245,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0,0,0,0,1.87967835959707,0.773494655682926,19.688407717211,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0.426467963801962,0.23806443146374,0.0645889098360061,0.124149428591716,0,0,0.404234377916439,0,0,1.14498490124799,0.143444410785353,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,30.1334382765039 | |||
|short_description=p@chr6:137105206..137105220,+ | |||
}} |
Revision as of 14:07, 22 January 2014
Short description: | p@chr6:137105206..137105220, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:137105206..137105220, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.02e-61 | 98 |
blood island | 2.02e-61 | 98 |
hemolymphoid system | 3.15e-58 | 108 |
bone marrow | 1.34e-56 | 76 |
immune system | 5.57e-52 | 93 |
bone element | 2.19e-51 | 82 |
skeletal element | 1.63e-45 | 90 |
skeletal system | 1.71e-39 | 100 |
connective tissue | 9.10e-25 | 371 |
lateral plate mesoderm | 5.97e-21 | 203 |
musculoskeletal system | 6.42e-18 | 167 |
mesoderm | 4.33e-08 | 315 |
mesoderm-derived structure | 4.33e-08 | 315 |
presumptive mesoderm | 4.33e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.00e-26 | 31 |
hematologic cancer | 1.40e-20 | 51 |
immune system cancer | 1.40e-20 | 51 |
leukemia | 6.81e-20 | 39 |