FFCP PHASE1:Hg19::chr6:146864960..146864999,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10981 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9772 | |||
|TSSclassifier=strong | |||
|UniProt=Q13637 | |||
|association_with_transcript=131bp_to_ENST00000367495_5end | |||
|coexpression_cluster_id=C4573 | |||
|description=CAGE_peak_1_at_RAB32_5end | |||
|id=chr6:146864960..146864999,+ | |||
|ontology_enrichment_celltype=CL:0000144!4.58e-39!625;CL:0002371!3.28e-38!591;CL:0000012!4.27e-31!682;CL:0000548!2.11e-30!679;CL:0000004!2.11e-30!679;CL:0000255!2.11e-30!679;CL:0000222!1.64e-28!119;CL:0000055!2.38e-24!180;CL:0000220!2.77e-22!246;CL:0002321!1.64e-21!248;CL:0000183!4.34e-19!59;CL:0000187!2.43e-18!54;CL:0000680!3.78e-18!57;CL:0000056!3.78e-18!57;CL:0000355!3.78e-18!57;CL:0000003!4.69e-18!722;CL:0000192!1.02e-17!42;CL:0000514!1.02e-17!42;CL:0000048!3.93e-17!430;CL:0000723!1.52e-16!436;CL:0000034!1.35e-15!444;CL:0000393!4.49e-14!60;CL:0000211!4.49e-14!60;CL:0000063!2.45e-13!578;CL:0000359!2.66e-13!32;CL:0000766!5.92e-12!76;CL:0000557!1.91e-11!71;CL:0000213!3.03e-11!57;CL:0000215!3.03e-11!57;CL:0002009!2.16e-10!65;CL:0000839!3.07e-10!70;CL:0002194!3.69e-10!63;CL:0000576!3.69e-10!63;CL:0000040!3.69e-10!63;CL:0000559!3.69e-10!63;CL:0002057!9.30e-10!42;CL:0000860!6.12e-09!45;CL:0000057!2.53e-08!75;CL:0002078!5.11e-08!44;CL:0000115!1.56e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000192;3.17e-13;43!CL:0000359;1.75e-12;32!CL:0000187;7.17e-11;55!CL:0000393;1.10e-07;61!CL:0000211;1.10e-07;61!CL:0000473;1.69e-07;39!CL:0000234;1.69e-07;39!CL:0000860;2.70e-07;33!CL:0002057;2.70e-07;33!CL:0000115;8.70e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.99e-29,121;CL:0002321,1.78e-22,250;CL:0000187,6.14e-19,55;CL:0000680,9.70e-19,58;CL:0000056,9.70e-19,58;CL:0000355,9.70e-19,58;CL:0000192,2.49e-18,43;CL:0000514,2.49e-18,43;CL:0000048,1.57e-17,427;CL:0000723,5.77e-17,433;CL:0000034,5.32e-16,441;CL:0000393,1.31e-14,61;CL:0000211,1.31e-14,61;CL:0000359,2.57e-13,32;CL:0000766,3.37e-12,72;CL:0000557,1.06e-11,67;CL:0000213,1.63e-11,58;CL:0000215,1.63e-11,58;CL:0000473,2.26e-11,48;CL:0000234,2.26e-11,48;CL:0002009,1.21e-10,61;CL:0000839,1.87e-10,66;CL:0002194,2.05e-10,59;CL:0000576,2.05e-10,59;CL:0000040,2.05e-10,59;CL:0000559,2.05e-10,59;CL:0000860,9.09e-10,42;CL:0002057,9.09e-10,42;CL:0000057,1.15e-08,76;CL:0002078,2.84e-08,45;CL:0000115,7.61e-08,36 | |||
|ontology_enrichment_development_v019=CL:0000514;3.17e-13;43!CL:0000355;3.91e-10;58!CL:0000222;4.06e-08;121!CL:0002057;1.81e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.18e-27!167;UBERON:0003081!2.11e-25!216;UBERON:0000926!2.73e-25!448;UBERON:0004120!2.73e-25!448;UBERON:0006603!2.73e-25!448;UBERON:0000914!6.59e-18!83;UBERON:0002329!6.59e-18!83;UBERON:0003077!6.59e-18!83;UBERON:0003059!6.59e-18!83;UBERON:0007282!6.59e-18!83;UBERON:0009618!6.59e-18!83;UBERON:0007285!6.59e-18!83;UBERON:0004290!2.37e-17!70;UBERON:0002049!3.38e-17!79;UBERON:0007798!3.38e-17!79;UBERON:0005256!3.43e-17!143;UBERON:0003914!5.57e-17!118;UBERON:0004872!5.73e-17!84;UBERON:0000486!5.20e-16!82;UBERON:0001134!1.25e-15!61;UBERON:0002036!1.25e-15!61;UBERON:0003082!1.25e-15!61;UBERON:0000055!2.62e-15!69;UBERON:0004535!4.92e-15!110;UBERON:0002385!7.43e-15!63;UBERON:0001015!7.43e-15!63;UBERON:0000383!7.43e-15!63;UBERON:0001981!1.08e-14!60;UBERON:0007500!1.08e-14!60;UBERON:0004537!1.08e-14!60;UBERON:0006965!1.08e-14!60;UBERON:0001637!1.14e-14!42;UBERON:0003509!1.14e-14!42;UBERON:0004572!1.14e-14!42;UBERON:0000490!2.62e-14!138;UBERON:0001009!6.96e-14!113;UBERON:0000467!9.37e-13!625;UBERON:0000480!2.04e-12!626;UBERON:0002371!6.47e-12!80;UBERON:0004765!1.05e-11!101;UBERON:0001434!1.05e-11!101;UBERON:0000468!1.28e-11!659;UBERON:0004573!1.81e-11!33;UBERON:0004571!1.81e-11!33;UBERON:0002405!4.55e-11!115;UBERON:0001474!9.08e-11!86;UBERON:0002100!1.49e-10!216;UBERON:0000923!1.87e-10!604;UBERON:0005291!1.87e-10!604;UBERON:0006598!1.87e-10!604;UBERON:0002532!1.87e-10!604;UBERON:0002050!1.94e-10!605;UBERON:0005423!1.94e-10!605;UBERON:0000922!2.89e-09!612;UBERON:0003104!2.00e-07!238;UBERON:0009142!2.00e-07!238;UBERON:0002193!4.00e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.05e-10;42!UBERON:0003509;1.05e-10;42!UBERON:0004572;1.05e-10;42!UBERON:0004573;2.48e-10;33!UBERON:0004571;2.48e-10;33!UBERON:0007500;5.02e-09;56!UBERON:0001981;5.02e-09;56!UBERON:0004537;5.02e-09;56!UBERON:0000055;1.11e-07;65!UBERON:0002049;1.92e-07;75!UBERON:0007798;1.92e-07;75!UBERON:0003914;3.77e-07;74 | |||
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| |||
|short_description=p1@RAB32 | |||
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Revision as of 14:28, 22 January 2014
Short description: | p1@RAB32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB32_5end |
Coexpression cluster: | C4573_Melanocyte_Monocytederived_Osteoblast_Alveolar_Smooth_mesothelioma_Hepatic |
Association with transcript: | 131bp_to_ENST00000367495_5end |
EntrezGene: | RAB32 |
HGNC: | 9772 |
UniProt: | Q13637 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.99e-29 | 121 |
embryonic cell | 1.78e-22 | 250 |
muscle cell | 6.14e-19 | 55 |
muscle precursor cell | 9.70e-19 | 58 |
myoblast | 9.70e-19 | 58 |
multi-potent skeletal muscle stem cell | 9.70e-19 | 58 |
smooth muscle cell | 2.49e-18 | 43 |
smooth muscle myoblast | 2.49e-18 | 43 |
multi fate stem cell | 1.57e-17 | 427 |
somatic stem cell | 5.77e-17 | 433 |
stem cell | 5.32e-16 | 441 |
electrically responsive cell | 1.31e-14 | 61 |
electrically active cell | 1.31e-14 | 61 |
vascular associated smooth muscle cell | 2.57e-13 | 32 |
myeloid leukocyte | 3.37e-12 | 72 |
granulocyte monocyte progenitor cell | 1.06e-11 | 67 |
lining cell | 1.63e-11 | 58 |
barrier cell | 1.63e-11 | 58 |
defensive cell | 2.26e-11 | 48 |
phagocyte | 2.26e-11 | 48 |
macrophage dendritic cell progenitor | 1.21e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.87e-10 | 66 |
monopoietic cell | 2.05e-10 | 59 |
monocyte | 2.05e-10 | 59 |
monoblast | 2.05e-10 | 59 |
promonocyte | 2.05e-10 | 59 |
classical monocyte | 9.09e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.09e-10 | 42 |
fibroblast | 1.15e-08 | 76 |
meso-epithelial cell | 2.84e-08 | 45 |
endothelial cell | 7.61e-08 | 36 |