FFCP PHASE1:Hg19::chr7:24613093..24613110,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51678 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18167 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NZW5 | |||
|association_with_transcript=8bp_to_ENST00000396475,NM_016447,uc003swx.2,uc003swy.2_5end | |||
|description=CAGE_peak_4_at_MPP6_5end | |||
|id=chr7:24613093..24613110,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.20e-09!53;CL:0000051!3.20e-09!53;CL:0000838!8.88e-09!52 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.89e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.17e-13,53;CL:0000051,2.17e-13,53;CL:0000838,2.31e-12,52 | |||
|ontology_enrichment_development_v019=CL:0000051;1.89e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.57e-12!82;UBERON:0005743!7.05e-12!86;UBERON:0000073!9.57e-12!94;UBERON:0001016!9.57e-12!94;UBERON:0001893!7.11e-10!34;UBERON:0001049!1.65e-09!57;UBERON:0005068!1.65e-09!57;UBERON:0006241!1.65e-09!57;UBERON:0007135!1.65e-09!57;UBERON:0000153!1.86e-09!129;UBERON:0007811!1.86e-09!129;UBERON:0002791!1.88e-09!33;UBERON:0001869!2.14e-09!32;UBERON:0002020!5.52e-09!34;UBERON:0003528!5.52e-09!34;UBERON:0000955!7.04e-09!69;UBERON:0006238!7.04e-09!69;UBERON:0002780!2.63e-08!41;UBERON:0001890!2.63e-08!41;UBERON:0006240!2.63e-08!41;UBERON:0002346!3.19e-08!90;UBERON:0000033!3.25e-08!123;UBERON:0003075!5.11e-08!86;UBERON:0007284!5.11e-08!86;UBERON:0003080!8.56e-08!42;UBERON:0002616!1.68e-07!59;UBERON:0000956!2.00e-07!25;UBERON:0000203!2.00e-07!25;UBERON:0003056!2.52e-07!61;UBERON:0002619!3.66e-07!22;UBERON:0000924!6.23e-07!173;UBERON:0006601!6.23e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.30e-10;22!UBERON:0002791;3.47e-09;32!UBERON:0000956;4.61e-09;25!UBERON:0000203;4.61e-09;25!UBERON:0001869;6.58e-09;32!UBERON:0001950;7.49e-08;20!UBERON:0003528;1.04e-07;34!UBERON:0002020;1.04e-07;34!UBERON:0002780;1.13e-07;41!UBERON:0001890;1.13e-07;41!UBERON:0000349;1.25e-07;5!UBERON:0001893;5.67e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.78e-11,56;UBERON:0005068,6.78e-11,56;UBERON:0006241,6.78e-11,56;UBERON:0007135,6.78e-11,56;UBERON:0002619,7.63e-11,22;UBERON:0001016,1.42e-10,89;UBERON:0001017,2.03e-10,81;UBERON:0002346,2.62e-10,86;UBERON:0003075,4.26e-10,82;UBERON:0007284,4.26e-10,82;UBERON:0002791,1.38e-09,32;UBERON:0001869,1.38e-09,32;UBERON:0000956,2.91e-09,25;UBERON:0000203,2.91e-09,25;UBERON:0003528,7.64e-09,34;UBERON:0002020,7.64e-09,34;UBERON:0001893,7.64e-09,34;UBERON:0000073,2.76e-08,53;UBERON:0002616,2.76e-08,53;UBERON:0001950,4.72e-08,20;UBERON:0002780,6.82e-08,41;UBERON:0001890,6.82e-08,41;UBERON:0003080,6.82e-08,41;UBERON:0006240,6.82e-08,41;UBERON:0000349,1.27e-07,5;UBERON:0003056,1.46e-07,61;UBERON:0000955,3.71e-07,68;UBERON:0006238,3.71e-07,68;UBERON:0001870,7.07e-07,3 | |||
|phase1_expression=0.363356758541113,0,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.547497700291537,0.376627918784408,0.61130724598361,0.328402357799783,0.472264687882075,0,1.53531759238885,0.154816123316076,0,0.30120591877825,0,3.40855682553327,1.13735385989937,0.587200878669695,0,0.401088894940283,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,1.63841583378639,0.889509253863555,0.853460445133014,1.60158394814405,1.14950487990897,0.661044872784862,0,1.70763890732835,1.76171156811282,0.764546456250458,0,1.12101712596307,0.263384084775077,2.360517241366,1.96505381374582,1.23360899399706,0,0.651844533267181,0.473447805734733,0,0,0,0,0.270803863765016,0,0,0.164437904603676,0,0,0.296573126324121,0.802622484269139,2.09071047609954,0,0.766440987203842,0.68725489096526,0.253019692019503,0.318565414324097,0.651083453856419,0,0.451725357233318,0,0,0.236777252044017,0,3.22570789159572,2.94184215361858,1.59306844271079,0,0,0.255725123687061,0.361439152384566,0,1.15877215168659,0.795285947051099,0.486634870302636,0.567208902984407,1.33037638477538,0.351339142772504,0.130979075497713,0,0,0,0,0,2.38490624305342,0,1.11437250398869,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0.367663080345869,1.62028389576352,0.446498641420399,0.22452937262617,0.563057402416611,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0.280901613404497,0.61246251376468,0.368502951935304,0.206651562351531,0,0.741800787835671,0,0,0.336672227908132,0.625592599359821,0.554128230968366,0,0,0.300476117813194,1.02088964844019,0,0.213557388818567,0,0,0,0,0.18611685633159,0.506328996723799,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0,0.853815942907168,1.19276791489337,1.39432731443422,0.725627385107593,1.26160425437814,1.09493207722749,0,0,0,0,0,0.473227200159376,0.337169380156203,0.482022059766964,0.330881918197182,0.653638332277218,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0.441463099414651,0.491953754172454,0.857839051492628,0,0,0.201057944823262,0,0,1.03993478527958,2.88662684050547,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0,0,0.447792613514241,0.290633938513962,0,0.492663237895943,0,0,0.144119953416961,0,0.190493682876507,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0.499864955910285,0,0,0,0.718874566474748,1.14861935834114,0,0.289562613335158,0.61642896765115,0.358121926479791,1.45710687191585,1.18218456121156,1.07813787429759,1.54011643535698,0.76228387266739,0,2.31986643833309,0,1.27587750330633,0,0,0,0.613457458595699,0.500170521059677,0.271265023699736,0.415941723061614,0,0,0.35142424497814,0,0,0,0,0.368738337083406,0.173767228936166,0.195801157462741,0.343143423810856,0.620304078368662,0.431428401637234,1.60091336705167,0,1.66435439510497,0.30239029332968,0.496215615637554,0.153461973288062,0.280660094433074,0.640695746278505,0,0.482561763430822,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.116210378459959,1.20859449591622,0.40101294060657,0,0.459257792658427,0.546273504020151,0.786746489756545,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.309123034943167,0.0915694648183434,0.247528499761764,0,0,0,0.290012154876366,0.154048617114644,0,0,0.429680979473094,0.290033387828457,0.596586391912706,0.178064071293475,0,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0.899362287916574,0.823611089208164,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0.573645408816206,0.196498082026242,0,0.709522128141196,0,0,0,0.349934720244983,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,1.48642540100575,1.15415370381156,1.77854608371035,0.318852545457645,0.399158742865633,0,0,0.649243880549111,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0.166849141711909,0.390776190804081,0.278406173895242,0,0.540911356951966,0,0,0,0.146508179271894,0,0.445773537109913,0.284136146806413,0.47748896947538,0.296964680832639,0.614321404198464,0,1.40669416410513,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0.755798243562828,0.306806047506464,0.246169610922139,0.311039587661807,0.718946809178615,0,0,0.197286811273867,0,0,0.969332746095218,0.834912883456661,1.99613798001194,0.260427761085233,0,0,0.227586896570999,0,0,0,2.62444152044929,0.868124974666461,0,2.53252521113357,1.52581736317083,2.87506075821184,0.591095237907095,3.07139556015562,0.544692317594951,0.139423744278603,0,0.113942055847001,0,0,0.108647371922008,0,0.274792780205587,0,4.08773192782946,0.470940769185074,0.166211681900156,0.451191321234361,0,0.503464760927528,0.75901493089674,0.158936578980379,0.421996129056054,0.326465616318295,0.565412285735763,0.432777279484182,0,0,0,0,0,0.313265848516366,0.539209063845416,0,0.702793337176017,1.64209310294099,0,0.242780379534093,0,0,1.83643656978294,0.884612114798832,0.901940516486955,0.622129148383483,0,0,0,0,1.70765727617876,0.277349346026277,0.173559738335131,0.0979923974143777,0.34823682632161,0.17472666824203,0.171986032471617,1.06431964417994,1.09633975629278,1.47807822695777,0.0969890164884194,0,0.225980740780532,0.411125773940253,0.19871461170299,1.32952671507345,0,0.801588202515337,1.49417096317547,0.39961921916426,0,0.343609788497747,2.05913997434357,0.288109595976299,1.36677789121976,0.235694034616795,0.815425236441684,0.627617077873999,2.65195365854437,0,0.600420288709789,0.821432273351958,2.55493176133945,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,9.31967596219631,0.157566364614447,0.164831716762333,0.13480708770837,7.38206111360616,0.423366660328922,3.18091875923721,2.45166131000836,0.643012593860077,0.962776056180637,0.415440338029185,0,0,0.91124334987037,0,1.81253126788156,0.104909176269996,0.633602019116439,0.179287339332845,0,0,0,0,0,0,0,2.39460383124975,0.246277562248017,0.511164065356265,0.339936274560377,0.879313402068495,0,0.904980694530854,0,2.22412889249628,0,0,0.628817220398664,0.414239055347196,0,0.592834895693833,0.730755590285376,0,0.544017803369474,1.0027595760908,0,0.327872630709804,0.314108192500469,1.77213635993397,0.854183854313742,1.502291168478,0,1.33114861844223,0.434674820589684,0.138348634936231,0.37494122388632,0.151649117541648,0.285465333544967,0.470531639396343,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.757612021100357,0.251567901752575,0,0.228840068396924,0.453692771289717,0,0.591420599958536,0.477890301491107,0.899606224327209,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0.398095888698616,0,0.343395705182793,0,0,0,0.214441591374926,0.260994291965212,0.906823702049089,1.62065732026684,2.20263034055821,1.07453304648892,0.308801447160972,1.31570429747224,0.706756583783524,3.08662461233464,0.506827321959218,11.0183852992817,0.690860683462397,0.911579868532147,1.65910123382077,0,0,0,0.327609848846413,0.491545817507439,0,0,0.426766918776564,0,0.567515953566836,0.552317850755522,0,0,1.15104934173287,0.970423302570136,2.04445724412665,0.109209638192014,0.509197589862076,1.70059936081346,0,0,0,0.47317047000752,4.00285374142735,0.352675943690684,0,2.376481328569,0,0.798169295285756,1.02558182120378,2.52071696221718,0.207471757392654,0.968853873791107,0,0.392590874004102,0.11796972334774,0.183428598521679,0.577628330751691,0.762764190934334,0.690359926060101,1.19349733269765,0.601682626794058,0.40341013740704,0.781514011233092,0,0.655087670040387,0.295712172434091,0.945526184657525,0,2.89361515101658,1.20490039368423,0.546974809018219,0.548257766857182,0.496211178389294,0.175871244359621,0.127762427639595,0,0.336283722218824,0,0,0,0.460935950223117,0,0.815636795721981,0.920818829879887,0.472775363535873,0.444925607568277,0.235479278551542,0.942693539496011,0.560544326627578,0,1.51149313853035,0,0.214429632529969,0,0,0.521574816907738,1.60342272946051,0,0,0,0,0.354996002191696,0.170426809518315,0.423387050190929,0.22910686854405,0,0,0,0,0.853425474875886,0,1.12929087541872,0,0.485710993059139,0.467878926924211,0.198950775161368,0.118920090777569,0.5647304101948,0,0.301925687133347,0,0,0,0,0,1.17785080268967,1.48523200163543,1.6906229103336,0.169927114687817,0.375935671919414,0.0644578879735772,0.299823467774787,0,0,0.160482733378337,0,0,0.573358332605805,0.157771562193185,0.679914901909147,3.05445483238264,0,0,0,0,2.3971620718665,0.98339014767326,0,0.305966489225945,0.534434810531121,0.0918948995348449,0,0,0.267964130156178,0,1.24119595034274,0.852935927603924,0.714193294391221,0.452122368852043,0.186224142887574,0.448527450322454,0.381882949668989,0.404234377916439,0.435433495793923,0.342233301085281,0.134704106029175,0.143444410785353,0,0.488419611665847,0.213454691755431,0,0.0898252021065869,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p4@MPP6 | |||
}} |
Revision as of 16:05, 22 January 2014
Short description: | p4@MPP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MPP6_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000396475, NM_016447, uc003swx.2, uc003swy.2_5end |
EntrezGene: | MPP6 |
HGNC: | 18167 |
UniProt: | Q9NZW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.17e-13 | 53 |
common lymphoid progenitor | 2.17e-13 | 53 |
lymphoid lineage restricted progenitor cell | 2.31e-12 | 52 |
Ontology term | p-value | n |
---|---|---|
neural tube | 6.78e-11 | 56 |
neural rod | 6.78e-11 | 56 |
future spinal cord | 6.78e-11 | 56 |
neural keel | 6.78e-11 | 56 |
regional part of cerebral cortex | 7.63e-11 | 22 |
nervous system | 1.42e-10 | 89 |
central nervous system | 2.03e-10 | 81 |
neurectoderm | 2.62e-10 | 86 |
neural plate | 4.26e-10 | 82 |
presumptive neural plate | 4.26e-10 | 82 |
regional part of telencephalon | 1.38e-09 | 32 |
cerebral hemisphere | 1.38e-09 | 32 |
cerebral cortex | 2.91e-09 | 25 |
pallium | 2.91e-09 | 25 |
brain grey matter | 7.64e-09 | 34 |
gray matter | 7.64e-09 | 34 |
telencephalon | 7.64e-09 | 34 |
regional part of nervous system | 2.76e-08 | 53 |
regional part of brain | 2.76e-08 | 53 |
neocortex | 4.72e-08 | 20 |
regional part of forebrain | 6.82e-08 | 41 |
forebrain | 6.82e-08 | 41 |
anterior neural tube | 6.82e-08 | 41 |
future forebrain | 6.82e-08 | 41 |
limbic system | 1.27e-07 | 5 |
pre-chordal neural plate | 1.46e-07 | 61 |
brain | 3.71e-07 | 68 |
future brain | 3.71e-07 | 68 |
frontal cortex | 7.07e-07 | 3 |