FFCP PHASE1:Mm9::chr10:13685585..13685645,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=15273|HGNC=|MCL_coexpression_id=2539|UniProt=Q3UHF7|association_with_transcript=-237bp_to_uc007elg.1_5end|description=CAGE_peak_2_at_Hivep2_5end|id=chr10:13685585..13685645,+|ontology_enrichment_celltype=CL:0000791!5.67e-07!9;CL:0000789!5.67e-07!9;CL:0002420!5.67e-07!9;CL:0002419!5.67e-07!9;CL:0000790!5.67e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,5.12e-07,9;CL:0000789,5.12e-07,9;CL:0002420,5.12e-07,9;CL:0002419,5.12e-07,9;CL:0000790,5.12e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.84e-13!34;UBERON:0000064!3.91e-12!99;UBERON:0002791!3.03e-11!29;UBERON:0003528!3.03e-11!29;UBERON:0001893!3.03e-11!29;UBERON:0000073!4.26e-11!75;UBERON:0001016!4.26e-11!75;UBERON:0001017!5.55e-11!73;UBERON:0005743!5.55e-11!73;UBERON:0000956!6.44e-11!21;UBERON:0001869!6.44e-11!21;UBERON:0000203!6.44e-11!21;UBERON:0001049!2.02e-10!52;UBERON:0005068!2.02e-10!52;UBERON:0006241!2.02e-10!52;UBERON:0007135!2.02e-10!52;UBERON:0000955!4.78e-10!50;UBERON:0006238!4.78e-10!50;UBERON:0002616!1.64e-09!49;UBERON:0002780!3.91e-09!39;UBERON:0001890!3.91e-09!39;UBERON:0006240!3.91e-09!39;UBERON:0007811!4.40e-09!86;UBERON:0003080!4.93e-09!40;UBERON:0000153!5.11e-09!94;UBERON:0002619!1.28e-08!17;UBERON:0002021!5.57e-08!10;UBERON:0000411!5.57e-08!10;UBERON:0001950!5.57e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.47e-13,34;UBERON:0003528,3.53e-11,29;UBERON:0002791,3.53e-11,29;UBERON:0001893,3.53e-11,29;UBERON:0000073,5.81e-11,54;UBERON:0001016,6.44e-11,75;UBERON:0000956,7.92e-11,21;UBERON:0001869,7.92e-11,21;UBERON:0000203,7.92e-11,21;UBERON:0001017,8.43e-11,73;UBERON:0001049,3.69e-10,52;UBERON:0005068,3.69e-10,52;UBERON:0006241,3.69e-10,52;UBERON:0007135,3.69e-10,52;UBERON:0002780,4.80e-09,39;UBERON:0001890,4.80e-09,39;UBERON:0006240,4.80e-09,39;UBERON:0000955,5.05e-09,47;UBERON:0006238,5.05e-09,47;UBERON:0003080,6.03e-09,40;UBERON:0002619,1.62e-08,17;UBERON:0002616,1.68e-08,46;UBERON:0002021,4.93e-08,10;UBERON:0000411,4.93e-08,10;UBERON:0001950,4.93e-08,10;UBERON:0004121,2.15e-07,95;UBERON:0000924,2.15e-07,95;UBERON:0006601,2.15e-07,95|phase1_expression=0.640595388419176,8.72438519098403,5.91499011206397,5.14189159221611,5.50985302940982,5.37213670118047,3.73780224952841,30.8604743025367,94.3284438416167,67.4105835807341,30.6480163123654,16.2735204350486,47.2514014610128,34.793320162761,1.33243904726265,1.41732687172878,0.699561878128147,7.41336088591859,7.40417941470989,7.63901373236454,4.16712121740242,2.28369187762036,1.30599894569468,1.27993938234725,1.37645568640302,5.7423196411502,2.58457197695445,4.09395342103189,0.760093677825496,1.51218077855958,2.43903561720835,0,0,0,3.75507105676657,1.49611180822643,3.67504841272264,0,0,1.0470474879476,0,0,0,1.25896817975577,1.52065396829272,1.65192076945513,0.782391344348039,0.872100625521786,0.878744730937887,2.72201858703997,1.39986421625363,0,21.643956181448,68.9094034910777,47.7253194782299,1.54355661621568,2.57880095944881,2.06268836910977,3.23706337375356,3.1739458756322,0.633831403506179,1.69422266034566,3.55717918444456,0.899899717281399,0.988866362566974,2.1314403448383,2.69640099466564,1.92109152660777,29.1367810586822,33.4814727062593,28.604194743788,7.9982275633065,6.40518768759679,11.3916443269907,8.53024692062304,7.35375029288017,5.50579404996943,4.72443150915195,5.22262213071228,2.37395317914349,3.20206752608434,2.6045668527838,3.62937898701795,3.93933827022176,5.04234217663473,6.77645746589436,8.39992916714707,5.21918448310842,3.55913108665965,3.09843396437821,21.4499721639242,3.44169550792555,4.75979933595425,0,3.89865850468601,1.79210754838934,1.96622188184453,0.681721290312231,1.03914401841148,0,1.69012103732017,0,0,0,2.16491041011214,1.52015919285059,0.505524445014783,2.05530983494308,12.1700805314171,1.48442139064825,1.38788261412909,0.913396434936424,0.230615497256059,1.65794904607885,0.705532242814229,1.38233250462643,1.97755974187499,3.7595832799177,1.76922110389975,6.30890714794896,4.19598885074748,4.363877278217,1.86391761218122,12.0040126774734,10.6817820474862,4.08731288333746,11.5022519525683,18.5969846607956,8.00542430560307,2.69623150928681,19.6725259212009,6.15706325353036,35.2863369990321,29.6629930503183,5.40248915854856,12.1680947300818,1.73126918545538,2.86136032403214,2.27450482590307,0.631325567659422,0.390361328888111,0.689706313300419,1.44049703844279,1.50704817835715,1.15662048557257,1.15302348256365,1.40552586839593,1.03481348295606,0,1.51284864134255,1.40760899331159,4.16471891612392,2.78047249225598,3.83077383174383,5.55611768301447,0.59710280045548,4.91549231119264,9.00717674901503,6.25159698670304,1.24275463521301,1.17263029990548,1.2604344302271,1.65721314909647,1.57411385397923,2.31400669331067,1.86027155800326,1.3413670069981,0.817357396570186,0.987359099480883,2.13417703302824,4.13450928683864,4.09359964790931,2.63460138349261,3.08674763148855,26.2862435705159,20.1693040263397,3.30418782983798,0.264450566663544,1.06644125267617,1.39342003116263,1.15980715189884,1.00841762311671,1.11189021922435,1.52180500890047,2.84717436926707,0.329397909448022,0.502670417600539,0.397912944082302,0.974820435595601,3.59527763461689,1.51296634912286,1.39398891278057,1.51734320762465,1.02823661348756,1.1270773567308,1.4255592949172,0.581857461502877,1.05203729835478,1.20149420536089,1.03327103585722,1.41298855057237,0.863780147452604,1.1858105083486,0.83422552858047,0.393117990226406,0.674586337154561,0.608580364165509,0.241177159752417,0.25462585178142,1.15078454980324,0.972811360650212,0.274561413188081,4.31304619582064,0.372140947668503,0.624075346229121,1.76805214562978,0.717589654087649,2.41221760681684,4.24932337383191,1.32643988239339,1.62964976442026,0.678980343100753,2.34690248288502,1.00503754465089,2.61848004974615,1.95133647857799,1.26108115284953,1.55025282754142,2.87018583583477,3.76885623846197,3.62638461918381,3.32692834737477,1.50791283939272,1.08781136763742,1.47529281905711,1.37968373152366,2.88991061978026,4.33683240391152,0.163934945376675,3.02965112645248,2.2085575359138,3.90438744296638,3.66219776145758,6.69112634267146,10.2487390077901,11.3230612315533,4.04810701674894,3.79932615284705,5.53402889125133,53.9819811588636,2.12910127812403,0.890328018336276,0.325773918707152,5.93892442701128,0,0.728341908464944,0.906970670894253,0.754420319023592,1.77181135728464,2.45948118355142,1.03371317267288,0.727067458955011,1.42598951353889,0.632073515871632,2.10837217149998,1.03135543248187,3.74483566329167,1.44048875225048,0.646793418913773,2.14337035031592,1.77340233642274,1.96205699362278,3.29098041204242,1.2178597964584,2.81606049676452,2.96564899209348,1.7642271844397,6.26567761177624,4.19807509409354,4.88534691918062,3.34242563208782,2.29797259643086,1.45740418314925,2.96680483216816,3.2465467351592,1.03193433981611,0.555583582109135,0.565105371014073,2.46049609897845,1.60144721244566,15.1280802694531,16.9341257311626,13.1289975114203,0.954670618015114,1.26534397432454,1.82987520414164,1.51207477150522,2.50905955217362,1.31017538247707,1.75323650300267,1.40510874733071,1.04702376793612,1.68499465279331,0.621339313086926,0,0,0.330916980914195,0.388902376688095,0.258319646955462,1.01373675294467,0.234714477291508,1.0416350787516,1.78260885523708,0,1.15212002503146,16.4325782726653,1.82452693761148,1.33524244314275,1.55904987573354,4.833720783022,6.55648470778174,6.00977247599844,10.0428878478713,9.08698049533329,4.57240839929999,7.36031151498936,14.0339348265243,12.3151157299622,13.0902130443357,5.21479882314986,0.665957860122194,0.179427713218951,0.671538465456314,3.86379188064381,3.00291960721891,6.77661009788881,2.78678892802786,2.00628841614145,84.71277639256,91.6047220649282,87.0801180427883,102.768203041525,50.6961064630275,53.6329667146687,45.226507515531,38.727623477283,54.8302314870888,46.080667745912,0.93408612825759,2.39414924040619,2.21953687480374,4.132814190161,1.88651846365184,4.59608771125035,4.4449345560323,3.5025959730612,4.49286893428541,2.77966932940177,4.30914809813408,3.39527414494937,5.61849044819294,3.9695594491019,3.96304735793732,4.28664322154766,6.02598494913249,3.8581844092741,2.06042950401653,4.71036544430071,3.08582327146874,2.8396128985494,5.7224685587357,3.48831399917588,3.76437521661322,2.79228206042532,3.10977553883713,4.99832451731901,3.53090695999241,1.12228454331548,4.62676570684279,4.33419722452479,2.45538625901814,3.40861050609125,5.98010494041538,5.24602213669686,5.38042699424439,1.71896843238639,4.3996316375834,3.08827986767322,2.78241402744506|short_description=p2@Hivep2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15273 | |||
|HGNC= | |||
|MCL_coexpression_id=2539 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UHF7 | |||
|association_with_transcript=-237bp_to_uc007elg.1_5end | |||
|cluster_id=chr10:13685585..13685645,+ | |||
|description=CAGE_peak_2_at_Hivep2_5end | |||
|id=chr10:13685585..13685645,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.67e-07!9;CL:0000789!5.67e-07!9;CL:0002420!5.67e-07!9;CL:0002419!5.67e-07!9;CL:0000790!5.67e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.12e-07,9;CL:0000789,5.12e-07,9;CL:0002420,5.12e-07,9;CL:0002419,5.12e-07,9;CL:0000790,5.12e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.84e-13!34;UBERON:0000064!3.91e-12!99;UBERON:0002791!3.03e-11!29;UBERON:0003528!3.03e-11!29;UBERON:0001893!3.03e-11!29;UBERON:0000073!4.26e-11!75;UBERON:0001016!4.26e-11!75;UBERON:0001017!5.55e-11!73;UBERON:0005743!5.55e-11!73;UBERON:0000956!6.44e-11!21;UBERON:0001869!6.44e-11!21;UBERON:0000203!6.44e-11!21;UBERON:0001049!2.02e-10!52;UBERON:0005068!2.02e-10!52;UBERON:0006241!2.02e-10!52;UBERON:0007135!2.02e-10!52;UBERON:0000955!4.78e-10!50;UBERON:0006238!4.78e-10!50;UBERON:0002616!1.64e-09!49;UBERON:0002780!3.91e-09!39;UBERON:0001890!3.91e-09!39;UBERON:0006240!3.91e-09!39;UBERON:0007811!4.40e-09!86;UBERON:0003080!4.93e-09!40;UBERON:0000153!5.11e-09!94;UBERON:0002619!1.28e-08!17;UBERON:0002021!5.57e-08!10;UBERON:0000411!5.57e-08!10;UBERON:0001950!5.57e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.47e-13,34;UBERON:0003528,3.53e-11,29;UBERON:0002791,3.53e-11,29;UBERON:0001893,3.53e-11,29;UBERON:0000073,5.81e-11,54;UBERON:0001016,6.44e-11,75;UBERON:0000956,7.92e-11,21;UBERON:0001869,7.92e-11,21;UBERON:0000203,7.92e-11,21;UBERON:0001017,8.43e-11,73;UBERON:0001049,3.69e-10,52;UBERON:0005068,3.69e-10,52;UBERON:0006241,3.69e-10,52;UBERON:0007135,3.69e-10,52;UBERON:0002780,4.80e-09,39;UBERON:0001890,4.80e-09,39;UBERON:0006240,4.80e-09,39;UBERON:0000955,5.05e-09,47;UBERON:0006238,5.05e-09,47;UBERON:0003080,6.03e-09,40;UBERON:0002619,1.62e-08,17;UBERON:0002616,1.68e-08,46;UBERON:0002021,4.93e-08,10;UBERON:0000411,4.93e-08,10;UBERON:0001950,4.93e-08,10;UBERON:0004121,2.15e-07,95;UBERON:0000924,2.15e-07,95;UBERON:0006601,2.15e-07,95 | |||
|phase1_expression=0.640595388419176,8.72438519098403,5.91499011206397,5.14189159221611,5.50985302940982,5.37213670118047,3.73780224952841,30.8604743025367,94.3284438416167,67.4105835807341,30.6480163123654,16.2735204350486,47.2514014610128,34.793320162761,1.33243904726265,1.41732687172878,0.699561878128147,7.41336088591859,7.40417941470989,7.63901373236454,4.16712121740242,2.28369187762036,1.30599894569468,1.27993938234725,1.37645568640302,5.7423196411502,2.58457197695445,4.09395342103189,0.760093677825496,1.51218077855958,2.43903561720835,0,0,0,3.75507105676657,1.49611180822643,3.67504841272264,0,0,1.0470474879476,0,0,0,1.25896817975577,1.52065396829272,1.65192076945513,0.782391344348039,0.872100625521786,0.878744730937887,2.72201858703997,1.39986421625363,0,21.643956181448,68.9094034910777,47.7253194782299,1.54355661621568,2.57880095944881,2.06268836910977,3.23706337375356,3.1739458756322,0.633831403506179,1.69422266034566,3.55717918444456,0.899899717281399,0.988866362566974,2.1314403448383,2.69640099466564,1.92109152660777,29.1367810586822,33.4814727062593,28.604194743788,7.9982275633065,6.40518768759679,11.3916443269907,8.53024692062304,7.35375029288017,5.50579404996943,4.72443150915195,5.22262213071228,2.37395317914349,3.20206752608434,2.6045668527838,3.62937898701795,3.93933827022176,5.04234217663473,6.77645746589436,8.39992916714707,5.21918448310842,3.55913108665965,3.09843396437821,21.4499721639242,3.44169550792555,4.75979933595425,0,3.89865850468601,1.79210754838934,1.96622188184453,0.681721290312231,1.03914401841148,0,1.69012103732017,0,0,0,2.16491041011214,1.52015919285059,0.505524445014783,2.05530983494308,12.1700805314171,1.48442139064825,1.38788261412909,0.913396434936424,0.230615497256059,1.65794904607885,0.705532242814229,1.38233250462643,1.97755974187499,3.7595832799177,1.76922110389975,6.30890714794896,4.19598885074748,4.363877278217,1.86391761218122,12.0040126774734,10.6817820474862,4.08731288333746,11.5022519525683,18.5969846607956,8.00542430560307,2.69623150928681,19.6725259212009,6.15706325353036,35.2863369990321,29.6629930503183,5.40248915854856,12.1680947300818,1.73126918545538,2.86136032403214,2.27450482590307,0.631325567659422,0.390361328888111,0.689706313300419,1.44049703844279,1.50704817835715,1.15662048557257,1.15302348256365,1.40552586839593,1.03481348295606,0,1.51284864134255,1.40760899331159,4.16471891612392,2.78047249225598,3.83077383174383,5.55611768301447,0.59710280045548,4.91549231119264,9.00717674901503,6.25159698670304,1.24275463521301,1.17263029990548,1.2604344302271,1.65721314909647,1.57411385397923,2.31400669331067,1.86027155800326,1.3413670069981,0.817357396570186,0.987359099480883,2.13417703302824,4.13450928683864,4.09359964790931,2.63460138349261,3.08674763148855,26.2862435705159,20.1693040263397,3.30418782983798,0.264450566663544,1.06644125267617,1.39342003116263,1.15980715189884,1.00841762311671,1.11189021922435,1.52180500890047,2.84717436926707,0.329397909448022,0.502670417600539,0.397912944082302,0.974820435595601,3.59527763461689,1.51296634912286,1.39398891278057,1.51734320762465,1.02823661348756,1.1270773567308,1.4255592949172,0.581857461502877,1.05203729835478,1.20149420536089,1.03327103585722,1.41298855057237,0.863780147452604,1.1858105083486,0.83422552858047,0.393117990226406,0.674586337154561,0.608580364165509,0.241177159752417,0.25462585178142,1.15078454980324,0.972811360650212,0.274561413188081,4.31304619582064,0.372140947668503,0.624075346229121,1.76805214562978,0.717589654087649,2.41221760681684,4.24932337383191,1.32643988239339,1.62964976442026,0.678980343100753,2.34690248288502,1.00503754465089,2.61848004974615,1.95133647857799,1.26108115284953,1.55025282754142,2.87018583583477,3.76885623846197,3.62638461918381,3.32692834737477,1.50791283939272,1.08781136763742,1.47529281905711,1.37968373152366,2.88991061978026,4.33683240391152,0.163934945376675,3.02965112645248,2.2085575359138,3.90438744296638,3.66219776145758,6.69112634267146,10.2487390077901,11.3230612315533,4.04810701674894,3.79932615284705,5.53402889125133,53.9819811588636,2.12910127812403,0.890328018336276,0.325773918707152,5.93892442701128,0,0.728341908464944,0.906970670894253,0.754420319023592,1.77181135728464,2.45948118355142,1.03371317267288,0.727067458955011,1.42598951353889,0.632073515871632,2.10837217149998,1.03135543248187,3.74483566329167,1.44048875225048,0.646793418913773,2.14337035031592,1.77340233642274,1.96205699362278,3.29098041204242,1.2178597964584,2.81606049676452,2.96564899209348,1.7642271844397,6.26567761177624,4.19807509409354,4.88534691918062,3.34242563208782,2.29797259643086,1.45740418314925,2.96680483216816,3.2465467351592,1.03193433981611,0.555583582109135,0.565105371014073,2.46049609897845,1.60144721244566,15.1280802694531,16.9341257311626,13.1289975114203,0.954670618015114,1.26534397432454,1.82987520414164,1.51207477150522,2.50905955217362,1.31017538247707,1.75323650300267,1.40510874733071,1.04702376793612,1.68499465279331,0.621339313086926,0,0,0.330916980914195,0.388902376688095,0.258319646955462,1.01373675294467,0.234714477291508,1.0416350787516,1.78260885523708,0,1.15212002503146,16.4325782726653,1.82452693761148,1.33524244314275,1.55904987573354,4.833720783022,6.55648470778174,6.00977247599844,10.0428878478713,9.08698049533329,4.57240839929999,7.36031151498936,14.0339348265243,12.3151157299622,13.0902130443357,5.21479882314986,0.665957860122194,0.179427713218951,0.671538465456314,3.86379188064381,3.00291960721891,6.77661009788881,2.78678892802786,2.00628841614145,84.71277639256,91.6047220649282,87.0801180427883,102.768203041525,50.6961064630275,53.6329667146687,45.226507515531,38.727623477283,54.8302314870888,46.080667745912,0.93408612825759,2.39414924040619,2.21953687480374,4.132814190161,1.88651846365184,4.59608771125035,4.4449345560323,3.5025959730612,4.49286893428541,2.77966932940177,4.30914809813408,3.39527414494937,5.61849044819294,3.9695594491019,3.96304735793732,4.28664322154766,6.02598494913249,3.8581844092741,2.06042950401653,4.71036544430071,3.08582327146874,2.8396128985494,5.7224685587357,3.48831399917588,3.76437521661322,2.79228206042532,3.10977553883713,4.99832451731901,3.53090695999241,1.12228454331548,4.62676570684279,4.33419722452479,2.45538625901814,3.40861050609125,5.98010494041538,5.24602213669686,5.38042699424439,1.71896843238639,4.3996316375834,3.08827986767322,2.78241402744506 | |||
|short_description=p2@Hivep2 | |||
}} |
Revision as of 03:58, 4 August 2015
Short description: | p2@Hivep2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hivep2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2539 |
Association with transcript: | -237bp_to_uc007elg.1_5end |
EntrezGene: | 15273 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.12e-07 | 9 |
alpha-beta T cell | 5.12e-07 | 9 |
immature T cell | 5.12e-07 | 9 |
mature T cell | 5.12e-07 | 9 |
immature alpha-beta T cell | 5.12e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gray matter | 5.47e-13 | 34 |
brain grey matter | 3.53e-11 | 29 |
regional part of telencephalon | 3.53e-11 | 29 |
telencephalon | 3.53e-11 | 29 |
regional part of nervous system | 5.81e-11 | 54 |
nervous system | 6.44e-11 | 75 |
cerebral cortex | 7.92e-11 | 21 |
cerebral hemisphere | 7.92e-11 | 21 |
pallium | 7.92e-11 | 21 |
central nervous system | 8.43e-11 | 73 |
neural tube | 3.69e-10 | 52 |
neural rod | 3.69e-10 | 52 |
future spinal cord | 3.69e-10 | 52 |
neural keel | 3.69e-10 | 52 |
regional part of forebrain | 4.80e-09 | 39 |
forebrain | 4.80e-09 | 39 |
future forebrain | 4.80e-09 | 39 |
brain | 5.05e-09 | 47 |
future brain | 5.05e-09 | 47 |
anterior neural tube | 6.03e-09 | 40 |
regional part of cerebral cortex | 1.62e-08 | 17 |
regional part of brain | 1.68e-08 | 46 |
occipital lobe | 4.93e-08 | 10 |
visual cortex | 4.93e-08 | 10 |
neocortex | 4.93e-08 | 10 |
ectoderm-derived structure | 2.15e-07 | 95 |
ectoderm | 2.15e-07 | 95 |
presumptive ectoderm | 2.15e-07 | 95 |