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FFCP PHASE1:Mm9::chr14:52533620..52533687,-: Difference between revisions

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{{FFCP|EntrezGene=29811|HGNC=|MCL_coexpression_id=2914|UniProt=Q9QYG0|association_with_transcript=-457bp_to_ENSMUST00000004673,ENSMUST00000111632,NM_001145959,NM_013864,uc007tnk.2,uc007tnl.2_5end|description=CAGE_peak_2_at_Ndrg2_5end|id=chr14:52533620..52533687,-|ontology_enrichment_celltype=CL:0002319!1.00e-08!43;CL:0000221!1.19e-08!44;CL:0000133!1.19e-08!44;CL:0000055!4.46e-08!50;CL:0000540!3.96e-07!33;CL:0000047!3.96e-07!33;CL:0000031!3.96e-07!33;CL:0000404!3.96e-07!33|ontology_enrichment_celltype_v019_2=CL:0002319,1.02e-08,43;CL:0000221,1.22e-08,44;CL:0000133,1.22e-08,44;CL:0000540,3.63e-07,33;CL:0000047,3.63e-07,33;CL:0000031,3.63e-07,33;CL:0000404,3.63e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.08e-17!73;UBERON:0005743!4.08e-17!73;UBERON:0000073!6.07e-16!75;UBERON:0001016!6.07e-16!75;UBERON:0004111!1.32e-15!122;UBERON:0000025!1.50e-15!114;UBERON:0004121!3.53e-15!102;UBERON:0000924!3.53e-15!102;UBERON:0006601!3.53e-15!102;UBERON:0001049!2.41e-10!52;UBERON:0005068!2.41e-10!52;UBERON:0006241!2.41e-10!52;UBERON:0007135!2.41e-10!52;UBERON:0000955!3.43e-10!50;UBERON:0006238!3.43e-10!50;UBERON:0002346!8.09e-10!71;UBERON:0003075!8.09e-10!71;UBERON:0007284!8.09e-10!71;UBERON:0002616!8.50e-10!49;UBERON:0000033!8.63e-09!63;UBERON:0000468!1.51e-08!333;UBERON:0002020!6.87e-08!34;UBERON:0000479!8.42e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.19e-17,73;UBERON:0001016,5.61e-16,75;UBERON:0010314,6.88e-16,92;UBERON:0004111,1.98e-15,122;UBERON:0000025,2.29e-15,114;UBERON:0004121,8.08e-15,95;UBERON:0000924,8.08e-15,95;UBERON:0006601,8.08e-15,95;UBERON:0000073,1.22e-11,54;UBERON:0001049,2.09e-10,52;UBERON:0005068,2.09e-10,52;UBERON:0006241,2.09e-10,52;UBERON:0007135,2.09e-10,52;UBERON:0010371,1.25e-09,73;UBERON:0002346,1.28e-09,64;UBERON:0003075,1.28e-09,64;UBERON:0007284,1.28e-09,64;UBERON:0000955,1.38e-08,47;UBERON:0006238,1.38e-08,47;UBERON:0002616,3.28e-08,46;UBERON:0002020,6.21e-08,34;UBERON:0000479,3.72e-07,349|phase1_expression=10.089377367602,0.697950815278722,0.909998478779072,0,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0,0,0,0.174840804837995,0,0,0,0,0,0,102.647251212341,0,0,0,0,0.57423196411502,0,0.215471232685889,0.570070258369122,0.252030129759931,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0,0.734187008646726,89.1926132556765,71.294226136406,85.677611266444,122.10197661865,137.186693192855,73.3138078261355,0,0,0,33.1864672486372,118.338310694707,80.9605184875584,21.4455448511174,29.6234948392338,25.9870875437533,13.8926258148344,41.7968554172235,0,2.96659908770092,0.7104801149461,41.0452151410214,54.9432176609823,6.0139975138917,8.50537411489651,7.99234853135252,177.103610330358,165.209668631807,6.85948475603743,6.42164655822184,9.19218786610021,599.030392636674,515.601471187988,593.535644502125,21.3655786122914,28.361169516747,24.4829284161677,556.411717009752,473.846117646674,485.745629682479,92.8080044242053,76.7383359507165,26.655120753018,0.302904773332736,3.6274348851257,13.0439019915755,109.273832376636,151.633607416828,149.497784083675,274.205648162916,287.185234629392,216.003518162634,0,0,0.35333957451034,16.0561498545416,0,0,0,1.5154372870785,1.77351905832569,2.02209778005913,85.4095420298569,5.17875767294343,32.6572705942614,7.11289839741157,21.9215144384742,17.5267777914604,24.2663451289722,41.8615797403109,20.1066546127481,19.2812074832812,25.7386855317443,86.6918340910877,113.560328663081,179.32331298984,100.369177398991,5.59175283654366,175.668478206928,159.598390591853,3.0654846625031,0.11981512450592,0,0.127070227073065,250.749530363673,172.935227865441,22.8690920845413,125.501159178824,91.5461337242583,226.90454465904,157.69850770186,22.7101781386205,54.9878810096611,8.33985102831127,40.404836330203,0.520481771850815,1.14951052216736,1.98068342785884,6.78171680260718,17.0771612869833,11.2740073850668,13.3056448874815,45.2730898793277,0.646703978798527,0.945530400839096,3.16712023495108,4.16471891612392,5.83899223373756,20.1986256582857,17.6972637310831,4.17971960318836,0,0,0.284163499395593,13.4631752148076,20.6382932783365,27.9096195264573,36.9321787512928,48.9942937051036,56.3074962038931,67.6673779223687,74.8482789904938,139.884880155869,71.912654412191,122.304760738926,205.104088151015,221.931580911654,205.498907912423,251.905448013218,107.668453664833,26.1377715443382,0.330418782983798,5.28901133327089,0.853153002140936,1.39342003116263,5.41243337552792,7.05892336181699,6.0042071838115,8.75037880117772,4.2707615539006,14.3288090609889,9.29940272560997,10.3457365461398,7.21367122340745,8.08937467788799,4.10662294761919,6.37252074413975,1.70701110857774,2.85621281524322,4.50830942692322,6.92414514674068,5.62462212786115,12.2036326609154,8.15751328902919,8.85660887877613,9.57692239832386,9.87177311374404,214.928154638183,1.16791574001266,0.589676985339609,0.674586337154561,1.01430060694251,1.4470629585145,5.60176873919124,16.3986798346962,15.5649817704034,4.3929826110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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:29811
|HGNC=
|MCL_coexpression_id=2914
|TSSclassifier=NA
|UniProt=uniprot:Q9QYG0
|association_with_transcript=-457bp_to_ENSMUST00000004673,ENSMUST00000111632,NM_001145959,NM_013864,uc007tnk.2,uc007tnl.2_5end
|cluster_id=chr14:52533620..52533687,-
|description=CAGE_peak_2_at_Ndrg2_5end
|id=chr14:52533620..52533687,-
|ontology_enrichment_celltype=CL:0002319!1.00e-08!43;CL:0000221!1.19e-08!44;CL:0000133!1.19e-08!44;CL:0000055!4.46e-08!50;CL:0000540!3.96e-07!33;CL:0000047!3.96e-07!33;CL:0000031!3.96e-07!33;CL:0000404!3.96e-07!33
|ontology_enrichment_celltype_v019_2=CL:0002319,1.02e-08,43;CL:0000221,1.22e-08,44;CL:0000133,1.22e-08,44;CL:0000540,3.63e-07,33;CL:0000047,3.63e-07,33;CL:0000031,3.63e-07,33;CL:0000404,3.63e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.19e-17,73;UBERON:0001016,5.61e-16,75;UBERON:0010314,6.88e-16,92;UBERON:0004111,1.98e-15,122;UBERON:0000025,2.29e-15,114;UBERON:0004121,8.08e-15,95;UBERON:0000924,8.08e-15,95;UBERON:0006601,8.08e-15,95;UBERON:0000073,1.22e-11,54;UBERON:0001049,2.09e-10,52;UBERON:0005068,2.09e-10,52;UBERON:0006241,2.09e-10,52;UBERON:0007135,2.09e-10,52;UBERON:0010371,1.25e-09,73;UBERON:0002346,1.28e-09,64;UBERON:0003075,1.28e-09,64;UBERON:0007284,1.28e-09,64;UBERON:0000955,1.38e-08,47;UBERON:0006238,1.38e-08,47;UBERON:0002616,3.28e-08,46;UBERON:0002020,6.21e-08,34;UBERON:0000479,3.72e-07,349
|phase1_expression=10.089377367602,0.697950815278722,0.909998478779072,0,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0,0,0,0.174840804837995,0,0,0,0,0,0,102.647251212341,0,0,0,0,0.57423196411502,0,0.215471232685889,0.570070258369122,0.252030129759931,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0,0.734187008646726,89.1926132556765,71.294226136406,85.677611266444,122.10197661865,137.186693192855,73.3138078261355,0,0,0,33.1864672486372,118.338310694707,80.9605184875584,21.4455448511174,29.6234948392338,25.9870875437533,13.8926258148344,41.7968554172235,0,2.96659908770092,0.7104801149461,41.0452151410214,54.9432176609823,6.0139975138917,8.50537411489651,7.99234853135252,177.103610330358,165.209668631807,6.85948475603743,6.42164655822184,9.19218786610021,599.030392636674,515.601471187988,593.535644502125,21.3655786122914,28.361169516747,24.4829284161677,556.411717009752,473.846117646674,485.745629682479,92.8080044242053,76.7383359507165,26.655120753018,0.302904773332736,3.6274348851257,13.0439019915755,109.273832376636,151.633607416828,149.497784083675,274.205648162916,287.185234629392,216.003518162634,0,0,0.35333957451034,16.0561498545416,0,0,0,1.5154372870785,1.77351905832569,2.02209778005913,85.4095420298569,5.17875767294343,32.6572705942614,7.11289839741157,21.9215144384742,17.5267777914604,24.2663451289722,41.8615797403109,20.1066546127481,19.2812074832812,25.7386855317443,86.6918340910877,113.560328663081,179.32331298984,100.369177398991,5.59175283654366,175.668478206928,159.598390591853,3.0654846625031,0.11981512450592,0,0.127070227073065,250.749530363673,172.935227865441,22.8690920845413,125.501159178824,91.5461337242583,226.90454465904,157.69850770186,22.7101781386205,54.9878810096611,8.33985102831127,40.404836330203,0.520481771850815,1.14951052216736,1.98068342785884,6.78171680260718,17.0771612869833,11.2740073850668,13.3056448874815,45.2730898793277,0.646703978798527,0.945530400839096,3.16712023495108,4.16471891612392,5.83899223373756,20.1986256582857,17.6972637310831,4.17971960318836,0,0,0.284163499395593,13.4631752148076,20.6382932783365,27.9096195264573,36.9321787512928,48.9942937051036,56.3074962038931,67.6673779223687,74.8482789904938,139.884880155869,71.912654412191,122.304760738926,205.104088151015,221.931580911654,205.498907912423,251.905448013218,107.668453664833,26.1377715443382,0.330418782983798,5.28901133327089,0.853153002140936,1.39342003116263,5.41243337552792,7.05892336181699,6.0042071838115,8.75037880117772,4.2707615539006,14.3288090609889,9.29940272560997,10.3457365461398,7.21367122340745,8.08937467788799,4.10662294761919,6.37252074413975,1.70701110857774,2.85621281524322,4.50830942692322,6.92414514674068,5.62462212786115,12.2036326609154,8.15751328902919,8.85660887877613,9.57692239832386,9.87177311374404,214.928154638183,1.16791574001266,0.589676985339609,0.674586337154561,1.01430060694251,1.4470629585145,5.60176873919124,16.3986798346962,15.5649817704034,4.3929826110093,12.9391385874619,13.3970741160661,16.8500343481863,58.5982996837299,87.904732625737,239.29198659623,29.1910040463235,2.65287976478679,3.42226450528254,4.58311731593008,13.6120344007331,40.3690080434776,51.893513713151,66.7357075673672,17.6551361398934,19.0459633097946,21.2074842314458,37.6885623846197,27.2842271348115,36.0176155867964,7.53956419696361,2.71952841909355,8.35999264132362,20.4193192265502,201.330439844691,218.365372121275,0,523.119761167461,60.5775781279213,60.518005365979,83.3688549225932,72.6465145775758,76.1971465361788,104.17216333029,68.4130085830571,69.5568941828922,84.1962967026095,93.5045030787459,39.0335234322739,17.8065603667255,23.2928351875614,29.0347416431662,3.98235415019888,1.94224508923985,1.81394134178851,8.11001842950362,12.4026795009925,12.912276213645,11.8877014857382,7.99774204850512,15.329387270543,8.21695570633122,4.21674434299995,7.21948802737308,5.10659408630682,1.44048875225048,1.68166288917581,3.42939256050548,7.44828981297549,13.3776613201553,20.7331765958672,32.8822145043767,2.11204537257339,1.69465656691056,7.93902232997863,97.2828892354732,47.4705414485962,15.6813604813205,11.2210003362948,11.3257220824092,5.82961673259701,188.762957446699,2.73393409276564,5.57244543500701,6.48180845793991,3.01389531207506,1.50363650493128,1.37266903923914,0.679913719975421,0.559805809294632,1.38199973804424,21.9574242143476,0.316335993581135,9.14937602070819,13.3926622619034,17.7725051612298,15.940467153471,10.7891477107857,13.9684340175818,17.53764811293,5.96228877142247,11.8054469486516,1.12738587736838,7.47582730219894,12.4093867842823,23.3341426012857,21.8280101677366,26.0192433255798,33.9162419686229,12.4996209450192,11.8491059201053,3.38217769156408,64.230691395504,1.58005560314089,1.62180172232131,2.2596410576262,1.94881234466693,1.9692936523423,2.58285761215644,1.32214994471966,2.36303243479324,1.31256384932592,0.838274873204998,1.10908803650525,1.07203668813728,0.384847366561318,0.935015217452552,296.563341768696,0.221985953374065,0.448569283047378,0.335769232728157,38.2515396183737,6.19352168988901,21.6118916635373,11.7902608493486,4.51414893631827,49.6981621503019,62.6042321649761,68.7474616127276,50.5248356090442,76.0441596945413,67.2300568676833,62.7770925215579,84.6603862061534,80.2062063902042,121.155912949926,1.03787347584177,3.19219898720825,4.09760653809922,9.48116196566347,6.28839487883947,15.2590112013512,42.4491250101085,38.3225206464343,39.4730627797933,39.92615945868,38.2753742834262,40.1774107152342,36.2392633908445,36.1101859563463,36.1269099730807,38.1034953026459,41.4865886882583,34.1449320220758,46.5657067907736,34.7389451517178,38.4013562671665,38.3347741304169,31.235140883099,36.4819505747145,36.3262208403176,36.2996667855292,33.8416749814629,43.4065023872441,33.9510284614654,30.8628249411756,36.4209505641215,38.9092705383476,33.1477144967448,34.5509155844704,26.4282057044164,25.7304895276084,51.2310222495444,68.3289951873589,184.019375450227,106.986838272965,144.917397262763
|short_description=p2@Ndrg2
}}

Revision as of 09:41, 4 August 2015

Short description:p2@Ndrg2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ndrg2_5end
Coexpression cluster:MCL_coexpression_mm9:2914
Association with transcript: -457bp_to_ENSMUST00000004673, ENSMUST00000111632, NM_001145959, NM_013864, uc007tnk.2, uc007tnl.2_5end
EntrezGene:29811
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ndrg2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3102.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B789.19
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C271.29
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B885.68
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3122.10
Mouse Astrocytes, donor2.CNhs12078.11552-120C4137.19
Mouse Astrocytes, donor3.CNhs12107.11633-122C473.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C133.19
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1118.34
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C580.96
Mouse Granule cells, donor1.CNhs12131.11713-123C321.45
Mouse Granule cells, donor2.CNhs12357.11731-123E329.62
Mouse Granule cells, donor3.CNhs12108.11636-122C725.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.89
Mouse Meningeal cells, donor3.CNhs12109.11639-122D141.80
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C841.05
Mouse Microglia, donor2.CNhs12634.11736-123E854.94
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1177.10
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5165.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.42
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3599.03
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3515.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7593.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F428.36
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D824.48
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4556.41
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5473.85
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6485.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D692.81
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F676.74
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E126.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F93.63
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7109.27
Mouse hepatocyte, donor1.CNhs13078.11714-123C4151.63
Mouse hepatocyte, donor3.CNhs12615.11637-122C8149.50
Mouse hepatocyte, donor6.CNhs13090.11822-124F4274.21
Mouse hepatocyte, donor8.CNhs13091.11824-124F6287.19
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7216.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B685.41
accessory axillary lymph node, adult.CNhs10475.1063-29H95.18
adrenal gland, adult.CNhs10508.49-24D732.66
adrenal gland, embryo E14.CNhs11038.406-44C57.11
adrenal gland, embryo E16.CNhs11004.1254-43D621.92
adrenal gland, embryo E17.CNhs11043.1263-45I117.53
adrenal gland, embryo E18.CNhs11026.1262-18F524.27
adrenal gland, neonate N00.CNhs11191.1311-23C141.86
adrenal gland, neonate N25.CNhs11223.1377-27I320.11
amnion, adult pregnant day17.5.CNhs10488.583-22A819.28
aorta, adult.CNhs10498.46-23H125.74
bone (os femoris), adult.CNhs10483.56-12G286.69
bone (os femoris), neonate N02.CNhs11227.1985-43F5113.56
bone (os femoris), neonate N16.CNhs11225.1525-43A6179.32
bone (os femoris), neonate N20.CNhs11195.1350-25C3100.37
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B2175.67
cerebellum, neonate N30.CNhs11135.1395-42I2159.60
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A4250.75
corpus striatum, adult.CNhs10487.19-21D8172.94
corpus striatum, neonate N00.CNhs11226.630-43F122.87
cortex, adult.CNhs10473.12-14D5125.50
cortex, neonate N30.CNhs11107.1392-42F291.55
diencephalon, adult.CNhs10482.20-12F2226.90
diencephalon, neonate N30.CNhs11201.1388-42B2157.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A254.99
epididymis, adult.CNhs10490.58-23B28.34
eyeball, adult.CNhs10484.31-12G440.40
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D46.78
eyeball, neonate N00.CNhs11207.633-15C617.08
eyeball, neonate N01.CNhs11140.1532-43E711.27
eyeball, neonate N02.CNhs11205.1551-44G813.31
eyeball, neonate N16.CNhs11188.777-19A245.27
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C420.20
forelimb, embryo E18.CNhs11008.1520-43B517.70
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E913.46
heart, embryo E12.CNhs11015.353-12F520.64
heart, embryo E13.CNhs11013.376-3I927.91
heart, embryo E14.CNhs10597.403-26D436.93
heart, embryo E15.CNhs11017.431-16C848.99
heart, embryo E16.CNhs11021.457-17C656.31
heart, embryo E17.CNhs11025.479-18E567.67
heart, embryo E18.CNhs11030.1283-20G374.85
heart, neonate N00.CNhs11213.639-21E3139.88
heart, neonate N03.CNhs11221.1349-25I271.91
heart, neonate N10.CNhs11118.749-24G1122.30
heart, neonate N16.CNhs11209.782-15G1205.10
heart, neonate N20.CNhs11127.821-26I6221.93
heart, neonate N25.CNhs11196.1351-25D3205.50
heart, neonate N30.CNhs11202.1390-42D2251.91
hippocampus, adult.CNhs10478.13-16E8107.67
hippocampus, neonate N00.CNhs11228.627-43G126.14
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A35.29
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D85.41
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F78.75
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E914.33
intestine, neonate N06.CNhs11102.688-20B89.30
intestine, neonate N07.CNhs11095.720-20F210.35
intestine, neonate N10.CNhs11098.755-23A57.21
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G16.37
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I26.92
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G712.20
kidney, neonate N10.CNhs11206.758-6D58.16
kidney, neonate N20.CNhs11113.832-19I18.86
kidney, neonate N25.CNhs11122.1353-25F39.58
kidney, neonate N30.CNhs11203.1385-42H19.87
liver, adult pregnant day01.CNhs10466.508-5B2214.93
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G416.40
liver, neonate N00.CNhs11117.641-24F415.56
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H213.40
liver, neonate N10.CNhs11115.751-24B916.85
liver, neonate N20.CNhs11220.823-25A358.60
liver, neonate N25.CNhs11198.1368-26H187.90
liver, neonate N30.CNhs11106.1382-42D1239.29
lung, adult.CNhs10474.28-22B129.19
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C54.58
lung, embryo E16.CNhs10998.458-17B613.61
lung, embryo E17.CNhs10605.480-44A640.37
lung, embryo E18.CNhs10583.1287-20I651.89
lung, neonate N00.CNhs11224.640-42C666.74
lung, neonate N06.CNhs11212.683-20E517.66
lung, neonate N07.CNhs11111.715-19A319.05
lung, neonate N10.CNhs11219.750-23E621.21
lung, neonate N20.CNhs11109.822-18A437.69
lung, neonate N25.CNhs11119.1359-25C727.28
lung, neonate N30.CNhs11133.1394-42H236.02
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H220.42
medulla oblongata, adult.CNhs10477.17-12C2201.33
medulla oblongata, neonate N30.CNhs11200.1396-42A3218.37
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2523.12
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E160.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E260.52
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E383.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D772.65
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D876.20
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9104.17
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D468.41
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D569.56
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D684.20
olfactory brain, adult.CNhs10489.18-22I993.50
ovary, adult.CNhs10507.91-2I739.03
ovary, embryo E18.CNhs11040.505-44H717.81
ovary, neonate N00.CNhs11217.1299-22I423.29
oviduct, adult pregnant day01.CNhs10500.988-6G629.03
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E58.11
pancreas, embryo E17.CNhs10599.1558-45G312.40
pancreas, embryo E18.CNhs10580.1535-43I712.91
pancreas, neonate N00.CNhs11105.645-26G911.89
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D815.33
pancreas, neonate N16.CNhs11136.787-43B68.22
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B97.45
pituitary gland, embryo E16.CNhs11036.449-43F613.38
pituitary gland, embryo E17.CNhs11039.1265-44F520.73
pituitary gland, neonate N00.CNhs11190.1308-22E932.88
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F87.94
skin, adult.CNhs10492.30-1C397.28
skin, neonate N00.CNhs11124.650-25G447.47
skin, neonate N03.CNhs11215.662-22H315.68
skin, neonate N06.CNhs11097.693-20I511.22
skin, neonate N10.CNhs11108.762-6C411.33
small intestine, neonate N16.CNhs11114.790-21I15.83
spinal cord, adult.CNhs10505.24-13C9188.76
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F26.48
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H621.96
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G89.15
stomach, embryo E16.CNhs11022.459-17D413.39
stomach, embryo E17.CNhs11006.1035-18D517.77
stomach, embryo E18.CNhs10999.1286-20C615.94
stomach, neonate N03.CNhs11193.1340-24B810.79
stomach, neonate N07.CNhs11210.718-18A913.97
stomach, neonate N25.CNhs11104.1355-25E417.54
stomach, neonate N30.CNhs11134.1386-42I15.96
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F57.48
testis, embryo E15.CNhs11034.443-27C512.41
testis, embryo E16.CNhs11033.470-26G523.33
testis, embryo E17.CNhs11029.486-18I521.83
testis, embryo E18.CNhs11027.503-18G526.02
testis, neonate N00.CNhs11189.1300-22B733.92
testis, neonate N07.CNhs11222.726-26I412.50
testis, neonate N10.CNhs11204.763-44D911.85
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E264.23
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I22.26
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B4296.56
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E438.25
uterus, adult pregnant day19.CNhs10497.590-15F56.19
uterus, adult.CNhs10509.92-27E521.61
vagina, adult.CNhs10502.89-27D511.79
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A149.70
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A262.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A368.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D750.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A476.04
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A567.23
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A662.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A784.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A880.21
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9121.16
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F215.26
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G542.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G538.32
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G539.47
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G539.93
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G538.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G540.18
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G536.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G536.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G536.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G538.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G541.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G534.14
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G546.57
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G534.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G538.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G538.33
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G531.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G536.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G536.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G536.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G533.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G543.41
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G533.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G530.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G536.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G538.91
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G533.15
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G534.55
whole body, embryo E17.5.CNhs10513.490-9F926.43
whole body, embryo E17.CNhs10517.475-3I525.73
whole body, embryo E18.CNhs10516.493-3B351.23
whole body, neonate N00.CNhs10525.657-19C268.33
whole body, neonate N01.CNhs10576.659-23C6184.02
whole body, neonate N06.CNhs10515.692-21D1106.99
whole body, neonate N10.CNhs10518.761-6B4144.92





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.02e-0843
ectodermal cell1.22e-0844
neurectodermal cell1.22e-0844
neuron3.63e-0733
neuronal stem cell3.63e-0733
neuroblast3.63e-0733
electrically signaling cell3.63e-0733

Uber anatomy
Ontology termp-valuen
central nervous system3.19e-1773
nervous system5.61e-1675
structure with developmental contribution from neural crest6.88e-1692
anatomical conduit1.98e-15122
tube2.29e-15114
ectoderm-derived structure8.08e-1595
ectoderm8.08e-1595
presumptive ectoderm8.08e-1595
regional part of nervous system1.22e-1154
neural tube2.09e-1052
neural rod2.09e-1052
future spinal cord2.09e-1052
neural keel2.09e-1052
ecto-epithelium1.25e-0973
neurectoderm1.28e-0964
neural plate1.28e-0964
presumptive neural plate1.28e-0964
brain1.38e-0847
future brain1.38e-0847
regional part of brain3.28e-0846
gray matter6.21e-0834
tissue3.72e-07349
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