FFCP PHASE1:Mm9::chr10:75022853..75022869,-: Difference between revisions
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{{FFCP|EntrezGene=192734|HGNC=|UniProt=Q7TPD7|association_with_transcript=205bp_to_ENSMUST00000051129,NM_198860,uc007fqn.2_5end|description=CAGE_peak_3_at_AI646023_5end|id=chr10:75022853..75022869,-|ontology_enrichment_celltype=CL:0000117!4.86e-15!23;CL:0000337!4.86e-15!23;CL:0000221!1.97e-13!44;CL:0000133!1.97e-13!44;CL:0002319!7.11e-13!43;CL:0000055!1.89e-11!50;CL:0000540!3.63e-10!33;CL:0000047!3.63e-10!33;CL:0000031!3.63e-10!33;CL:0000404!3.63e-10!33;CL:0000393!2.51e-09!39;CL:0000211!2.51e-09!39;CL:0002321!1.02e-08!70;CL:0000220!1.02e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,8.32e-29,23;CL:0000337,8.32e-29,23;CL:0000221,3.30e-26,44;CL:0000133,3.30e-26,44;CL:0002319,1.00e-24,43;CL:0002321,1.51e-22,70;CL:0000540,1.13e-18,33;CL:0000047,1.13e-18,33;CL:0000031,1.13e-18,33;CL:0000404,1.13e-18,33;CL:0000393,4.23e-15,39;CL:0000211,4.23e-15,39;CL:0002453,1.00e-08,8;CL:0002293,3.13e-08,3;CL:0000120,4.79e-08,3;CL:0002613,6.22e-08,3;CL:0002612,6.91e-08,3;CL:0002614,1.92e-07,3;CL:0000333,7.53e-07,10;CL:0000095,7.53e-07,10;CL:0000243,7.53e-07,10;CL:0000123,7.53e-07,10;CL:0000125,7.53e-07,10;CL:0000030,7.53e-07,10;CL:0000339,7.53e-07,10;CL:0000723,9.56e-07,91;CL:0000048,9.56e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.88e-12!73;UBERON:0005743!5.88e-12!73;UBERON:0000073!8.24e-12!75;UBERON:0001016!8.24e-12!75;UBERON:0004121!1.22e-10!102;UBERON:0000924!1.22e-10!102;UBERON:0006601!1.22e-10!102;UBERON:0001049!2.06e-09!52;UBERON:0005068!2.06e-09!52;UBERON:0006241!2.06e-09!52;UBERON:0007135!2.06e-09!52;UBERON:0002020!6.57e-09!34;UBERON:0000033!3.03e-08!63;UBERON:0002616!1.37e-07!49;UBERON:0002346!3.34e-07!71;UBERON:0003075!3.34e-07!71;UBERON:0007284!3.34e-07!71;UBERON:0000955!3.59e-07!50;UBERON:0006238!3.59e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.86e-19,73;UBERON:0001016,2.39e-18,75;UBERON:0002020,2.29e-15,34;UBERON:0000073,1.09e-14,54;UBERON:0002240,3.13e-14,6;UBERON:0005174,3.13e-14,6;UBERON:0001137,3.13e-14,6;UBERON:0004121,3.48e-14,95;UBERON:0000924,3.48e-14,95;UBERON:0006601,3.48e-14,95;UBERON:0002420,3.18e-13,8;UBERON:0007245,3.18e-13,8;UBERON:0010009,3.18e-13,8;UBERON:0010011,3.18e-13,8;UBERON:0000454,3.18e-13,8;UBERON:0001049,1.48e-12,52;UBERON:0005068,1.48e-12,52;UBERON:0006241,1.48e-12,52;UBERON:0007135,1.48e-12,52;UBERON:0001948,2.47e-12,5;UBERON:0002315,2.47e-12,5;UBERON:0003076,2.83e-11,12;UBERON:0003057,2.83e-11,12;UBERON:0002346,2.65e-09,64;UBERON:0003075,2.65e-09,64;UBERON:0007284,2.65e-09,64;UBERON:0010371,1.60e-08,73;UBERON:0003528,2.33e-08,29;UBERON:0002791,2.33e-08,29;UBERON:0001893,2.33e-08,29;UBERON:0002257,6.91e-08,3;UBERON:0000369,1.56e-07,5;UBERON:0002435,1.56e-07,5;UBERON:0000204,1.56e-07,5;UBERON:0010082,1.56e-07,5;UBERON:0002038,1.92e-07,3;UBERON:0009663,1.92e-07,3;UBERON:0009661,1.92e-07,3;UBERON:0000125,1.92e-07,3;UBERON:0002308,1.92e-07,3;UBERON:0011216,2.89e-07,194|phase1_expression=0.640595388419176,0.348975407639361,1.81999695755814,0,2.00358291978539,0,0,0,0,0,0,0,0,0.174840804837995,0,0.202475267389826,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0,0.683045484958446,0,0.251793635951155,0.101376931219515,0,0,1.52617609466313,1.97717564461025,1.36100929351998,0.699932108126813,1.43752564364972,0,0,0.336093799142464,0,0.573066879877513,0.515672092277442,4.04632921719196,3.70293685490423,4.43681982454325,0.338844532069132,0,0,0,0,1.19840044207362,1.15265491596466,0.414758449233911,0.810035629990144,1.26194976810829,5.14171771926846,4.41737081903227,0.489963196859816,0.383381884072945,0.919218786610021,2.20231761998777,1.27687338085188,1.0752457327937,3.16527090552465,4.7573574673253,3.12548022334056,2.51264699101243,2.25105044012672,2.29197371665215,4.12480019663135,3.84403538157578,2.79599168737951,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,1.1930122580464,0,1.06001872353102,1.26759077799012,10.2661181931454,2.54805239706646,28.4426681261332,0,0,0,0.11418387971906,0,0,0,0,0,0.301445281105245,0,0,0,0,0,0.647067399789637,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0.748953197024114,0.457500602818626,1.13088916901578,0.173824320192276,0.255715457330331,0.62336413367868,0.324482526135515,0.611036183101898,0.746441823660558,0.505445516867349,0.210441855886474,0,0.229902104433473,0.180062129805349,0.452114453507145,0.680364991513279,0.2562274405697,0.562210347358373,0.258703370739016,0,0,0,0.43839146485515,0.556094498451196,0,0.61734640922383,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,0.420579897128254,0.823236899034275,0,0.793351699990633,0,0,0.257734922644187,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0.163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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:192734 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7TPD7 | |||
|association_with_transcript=205bp_to_ENSMUST00000051129,NM_198860,uc007fqn.2_5end | |||
|cluster_id=chr10:75022853..75022869,- | |||
|description=CAGE_peak_3_at_AI646023_5end | |||
|id=chr10:75022853..75022869,- | |||
|ontology_enrichment_celltype=CL:0000117!4.86e-15!23;CL:0000337!4.86e-15!23;CL:0000221!1.97e-13!44;CL:0000133!1.97e-13!44;CL:0002319!7.11e-13!43;CL:0000055!1.89e-11!50;CL:0000540!3.63e-10!33;CL:0000047!3.63e-10!33;CL:0000031!3.63e-10!33;CL:0000404!3.63e-10!33;CL:0000393!2.51e-09!39;CL:0000211!2.51e-09!39;CL:0002321!1.02e-08!70;CL:0000220!1.02e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.32e-29,23;CL:0000337,8.32e-29,23;CL:0000221,3.30e-26,44;CL:0000133,3.30e-26,44;CL:0002319,1.00e-24,43;CL:0002321,1.51e-22,70;CL:0000540,1.13e-18,33;CL:0000047,1.13e-18,33;CL:0000031,1.13e-18,33;CL:0000404,1.13e-18,33;CL:0000393,4.23e-15,39;CL:0000211,4.23e-15,39;CL:0002453,1.00e-08,8;CL:0002293,3.13e-08,3;CL:0000120,4.79e-08,3;CL:0002613,6.22e-08,3;CL:0002612,6.91e-08,3;CL:0002614,1.92e-07,3;CL:0000333,7.53e-07,10;CL:0000095,7.53e-07,10;CL:0000243,7.53e-07,10;CL:0000123,7.53e-07,10;CL:0000125,7.53e-07,10;CL:0000030,7.53e-07,10;CL:0000339,7.53e-07,10;CL:0000723,9.56e-07,91;CL:0000048,9.56e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.88e-12!73;UBERON:0005743!5.88e-12!73;UBERON:0000073!8.24e-12!75;UBERON:0001016!8.24e-12!75;UBERON:0004121!1.22e-10!102;UBERON:0000924!1.22e-10!102;UBERON:0006601!1.22e-10!102;UBERON:0001049!2.06e-09!52;UBERON:0005068!2.06e-09!52;UBERON:0006241!2.06e-09!52;UBERON:0007135!2.06e-09!52;UBERON:0002020!6.57e-09!34;UBERON:0000033!3.03e-08!63;UBERON:0002616!1.37e-07!49;UBERON:0002346!3.34e-07!71;UBERON:0003075!3.34e-07!71;UBERON:0007284!3.34e-07!71;UBERON:0000955!3.59e-07!50;UBERON:0006238!3.59e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.86e-19,73;UBERON:0001016,2.39e-18,75;UBERON:0002020,2.29e-15,34;UBERON:0000073,1.09e-14,54;UBERON:0002240,3.13e-14,6;UBERON:0005174,3.13e-14,6;UBERON:0001137,3.13e-14,6;UBERON:0004121,3.48e-14,95;UBERON:0000924,3.48e-14,95;UBERON:0006601,3.48e-14,95;UBERON:0002420,3.18e-13,8;UBERON:0007245,3.18e-13,8;UBERON:0010009,3.18e-13,8;UBERON:0010011,3.18e-13,8;UBERON:0000454,3.18e-13,8;UBERON:0001049,1.48e-12,52;UBERON:0005068,1.48e-12,52;UBERON:0006241,1.48e-12,52;UBERON:0007135,1.48e-12,52;UBERON:0001948,2.47e-12,5;UBERON:0002315,2.47e-12,5;UBERON:0003076,2.83e-11,12;UBERON:0003057,2.83e-11,12;UBERON:0002346,2.65e-09,64;UBERON:0003075,2.65e-09,64;UBERON:0007284,2.65e-09,64;UBERON:0010371,1.60e-08,73;UBERON:0003528,2.33e-08,29;UBERON:0002791,2.33e-08,29;UBERON:0001893,2.33e-08,29;UBERON:0002257,6.91e-08,3;UBERON:0000369,1.56e-07,5;UBERON:0002435,1.56e-07,5;UBERON:0000204,1.56e-07,5;UBERON:0010082,1.56e-07,5;UBERON:0002038,1.92e-07,3;UBERON:0009663,1.92e-07,3;UBERON:0009661,1.92e-07,3;UBERON:0000125,1.92e-07,3;UBERON:0002308,1.92e-07,3;UBERON:0011216,2.89e-07,194 | |||
|phase1_expression=0.640595388419176,0.348975407639361,1.81999695755814,0,2.00358291978539,0,0,0,0,0,0,0,0,0.174840804837995,0,0.202475267389826,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0,0.683045484958446,0,0.251793635951155,0.101376931219515,0,0,1.52617609466313,1.97717564461025,1.36100929351998,0.699932108126813,1.43752564364972,0,0,0.336093799142464,0,0.573066879877513,0.515672092277442,4.04632921719196,3.70293685490423,4.43681982454325,0.338844532069132,0,0,0,0,1.19840044207362,1.15265491596466,0.414758449233911,0.810035629990144,1.26194976810829,5.14171771926846,4.41737081903227,0.489963196859816,0.383381884072945,0.919218786610021,2.20231761998777,1.27687338085188,1.0752457327937,3.16527090552465,4.7573574673253,3.12548022334056,2.51264699101243,2.25105044012672,2.29197371665215,4.12480019663135,3.84403538157578,2.79599168737951,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,1.1930122580464,0,1.06001872353102,1.26759077799012,10.2661181931454,2.54805239706646,28.4426681261332,0,0,0,0.11418387971906,0,0,0,0,0,0.301445281105245,0,0,0,0,0,0.647067399789637,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0.748953197024114,0.457500602818626,1.13088916901578,0.173824320192276,0.255715457330331,0.62336413367868,0.324482526135515,0.611036183101898,0.746441823660558,0.505445516867349,0.210441855886474,0,0.229902104433473,0.180062129805349,0.452114453507145,0.680364991513279,0.2562274405697,0.562210347358373,0.258703370739016,0,0,0,0.43839146485515,0.556094498451196,0,0.61734640922383,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,0.420579897128254,0.823236899034275,0,0.793351699990633,0,0,0.257734922644187,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0.983528546038072,0.275936746304732,0.80275294993896,1.28932855251423,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0.395287777946524,0,0.141940085208269,0.178065603667255,0.325773918707152,0.824850614862677,0,0,0,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,0.356497378384721,0.948110273807448,1.05418608574999,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0.164549020602121,0.608929898229199,0.469343416127421,0.21183207086382,3.96951116498931,0,0,0.361877549568935,0.954978752025092,0.328281799490123,0.291480836629851,2.22510362412612,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.269728692769641,0,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.387479470433193,0.844780627453891,1.05621514781179,1.5624526181274,0.209718688851422,0.483168241652012,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0.194915761479505,0,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0.36630324853453,0,6.52043735245972,0,0,0,0,0,0,1.35004500046361,0.45032120322422,1.35942722695261,0,0.103787347584177,0.399024873401031,0,0.486213434136588,0,0.183843508450014,0,0.412070114477788,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.468207537349412,0.576226371643824,0.918967503289812,0.476293691283074,0.463537303779422,0.578727661391115,0,0.441596760403192,0.342869252385415,0.887379030796687,0.476872379894642,0.726732083161643,0.564656282491984,0.423073039458382,0.548783918618318,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.591026894253381,0.409231043169689,0.309873682371932,0.578719832943424,0.999242311751784,0.233931608445408,0.429742108096597,0.57386499620653,0.882365676478062,0 | |||
|short_description=p3@AI646023 | |||
}} |
Revision as of 16:39, 4 August 2015
Short description: | p3@AI646023 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_AI646023_5end |
Coexpression cluster: | NA |
Association with transcript: | 205bp_to_ENSMUST00000051129, NM_198860, uc007fqn.2_5end |
EntrezGene: | 192734 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.32e-29 | 23 |
neuroblast (sensu Vertebrata) | 8.32e-29 | 23 |
ectodermal cell | 3.30e-26 | 44 |
neurectodermal cell | 3.30e-26 | 44 |
neural cell | 1.00e-24 | 43 |
embryonic cell | 1.51e-22 | 70 |
neuron | 1.13e-18 | 33 |
neuronal stem cell | 1.13e-18 | 33 |
neuroblast | 1.13e-18 | 33 |
electrically signaling cell | 1.13e-18 | 33 |
electrically responsive cell | 4.23e-15 | 39 |
electrically active cell | 4.23e-15 | 39 |
oligodendrocyte precursor cell | 1.00e-08 | 8 |
epithelial cell of thymus | 3.13e-08 | 3 |
granule cell | 4.79e-08 | 3 |
striatum neuron | 6.22e-08 | 3 |
neuron of the ventral spinal cord | 6.91e-08 | 3 |
neuron of the substantia nigra | 1.92e-07 | 3 |
migratory neural crest cell | 7.53e-07 | 10 |
neuron associated cell | 7.53e-07 | 10 |
glial cell (sensu Vertebrata) | 7.53e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 7.53e-07 | 10 |
glial cell | 7.53e-07 | 10 |
glioblast | 7.53e-07 | 10 |
glioblast (sensu Vertebrata) | 7.53e-07 | 10 |
somatic stem cell | 9.56e-07 | 91 |
multi fate stem cell | 9.56e-07 | 91 |