FFCP PHASE1:Mm9::chr2:25324643..25324713,-: Difference between revisions
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{{FFCP|EntrezGene=19215|HGNC=|MCL_coexpression_id=329|UniProt=|association_with_transcript=0bp_to_ENSMUST00000137417_5end|description=CAGE_peak_2_at_Ptgds_5end|id=chr2:25324643..25324713,-|ontology_enrichment_celltype=CL:0000221!2.11e-07!44;CL:0000133!2.11e-07!44;CL:0002319!5.39e-07!43|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.28e-19!73;UBERON:0005743!3.28e-19!73;UBERON:0000033!1.44e-18!63;UBERON:0000073!3.98e-18!75;UBERON:0001016!3.98e-18!75;UBERON:0004121!4.70e-18!102;UBERON:0000924!4.70e-18!102;UBERON:0006601!4.70e-18!102;UBERON:0002346!1.96e-16!71;UBERON:0003075!1.96e-16!71;UBERON:0007284!1.96e-16!71;UBERON:0000955!8.81e-15!50;UBERON:0006238!8.81e-15!50;UBERON:0002616!2.97e-14!49;UBERON:0001049!5.17e-14!52;UBERON:0005068!5.17e-14!52;UBERON:0006241!5.17e-14!52;UBERON:0007135!5.17e-14!52;UBERON:0003056!1.43e-13!49;UBERON:0003080!9.77e-10!40;UBERON:0002780!3.28e-09!39;UBERON:0001890!3.28e-09!39;UBERON:0006240!3.28e-09!39;UBERON:0007811!2.07e-08!86;UBERON:0002020!4.53e-07!34;UBERON:0000025!5.71e-07!114;UBERON:0000153!7.89e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.22e-21,92;UBERON:0001017,2.27e-18,73;UBERON:0004121,6.26e-18,95;UBERON:0000924,6.26e-18,95;UBERON:0006601,6.26e-18,95;UBERON:0002346,7.83e-18,64;UBERON:0003075,7.83e-18,64;UBERON:0007284,7.83e-18,64;UBERON:0001016,2.99e-17,75;UBERON:0010371,2.78e-15,73;UBERON:0000073,1.43e-13,54;UBERON:0001049,8.86e-13,52;UBERON:0005068,8.86e-13,52;UBERON:0006241,8.86e-13,52;UBERON:0007135,8.86e-13,52;UBERON:0003056,1.10e-12,49;UBERON:0000955,1.43e-12,47;UBERON:0006238,1.43e-12,47;UBERON:0002616,5.17e-12,46;UBERON:0003080,1.51e-08,40;UBERON:0002780,5.34e-08,39;UBERON:0001890,5.34e-08,39;UBERON:0006240,5.34e-08,39|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.22867966284093,6.25532992565577,6.00759515019551,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,30.5132624295735,19.6222640742402,1.5378032791413,3.69416808241138,5.03951117851305,2.87505128729943,0,0,0,0,0,0,0.202316460859598,1.05798195854407,1.90149421051854,0.338844532069132,1.77858959222228,0,0,0,4.49400165777607,5.76327457982332,0.311068836925433,0.540023753326763,1.68259969081106,3.71346279724945,7.28866185140325,2.32732518508413,1.62937300731002,0.919218786610021,6.60695285996332,16.0886045987337,7.37311359629969,0.263772575460388,1.00636407962651,2.08365348222704,28.4766658981409,41.6444331423443,27.1980881042722,1.76777151284201,1.13897344639282,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,2.10666630197628,0,0,0,16.1969932743183,0,0,0,0,0,0,1.25602267690966,0,0,1.73485326766136,0.304465478312141,0.230615497256059,0.150722640552623,2.3517741427141,0,0,0,0,0.161766849947409,0,0,0,18.1524094147159,21.9919042154128,0,0,0,0,26.213361895844,18.7575247155637,0.376963056338593,18.7730265807659,13.5529192385075,15.1685272528479,22.5515355664183,6.82323737797119,2.48813941220186,43.468314450592,22.3068367239662,1.04096354370163,6.20735681970377,8.10279584124071,14.4676625122286,19.9346942513391,17.6796933993093,21.3639931996182,44.7556831378497,0,0.189106080167819,0,0.657587197282725,0.278047249225598,0,0.823128545631774,10.7478504081986,0,0,0,0,0.234526059981096,4.50155153652537,13.0209604571866,40.92696020346,67.7232625575591,148.821724640261,191.278935197928,202.354338322305,100.875187996964,45.9668899421467,9.40398190731926,11.1111990443253,26.126463719635,84.818456656555,16.4026159880019,6.07137213037778,0,0,0.426576501070468,0.696710015581316,1.15980715189884,0.403367049246685,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0,0,0,0,0,0,0.571242563048644,0,2.64746726198909,1.16371492300575,0.49095073923223,6.57659986092276,4.57591458736767,2.82597710114475,2.22114895059241,0,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.568474235311454,0.651859905768103,2.03694102930226,2.11221223459652,3.85264392116176,0.476087281772027,0.585400943573396,0.315270288212382,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,23.2798355482298,43.4855357257074,0,0.252470927204373,1.89304931649754,3.90438744296638,2.36965737506079,3.58453196928828,3.11918143715352,2.54768877709949,6.8817819284732,5.84511715822624,6.7198922250909,17.9939937196212,0,15.8478387263857,7.81857404897165,0.494910368917606,0,2.42780636154981,5.44182402536552,2.07465587731488,1.47650946440386,0.922305443831782,0.516856586336442,0,0.712994756769443,0,0,1.03135543248187,0.340439605753788,0.36012218806262,8.27895576209629,10.7168517515796,12.5911565886014,13.0209236849512,6.74650984468696,2.74018454203139,0.469343416127421,0,0,0.16488625294148,0.968786560175433,1.20625849856312,0.954978752025092,0.492422699235184,0,21.1384844291981,0,2.47664241555867,0.185194527369712,0,0,0,0.509935289981566,0.279902904647316,0.276399947608848,0,0.316335993581135,1.82987520414164,0.540026704109006,1.04544148007234,0.436725127492355,0,0,0,0,0,9.01908701894705,42.163665984402,49.3066301562151,42.7792614356905,50.1140115093597,55.2486530354845,28.7525234682097,7.42164993610516,0.419437377702843,0,0.576060012515731,0,0,0,0,0.179026695667481,0.596044064343795,0,0.295379054349154,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,2.25900737046827,3.22227665555024,2.86447756719698,1.71853182343688,7.53590771747707,7.55393897389701,8.77529250301348,9.90706647093285,9.5159905886683,11.9084871702919,0,0,0.682934423016537,1.21553358534147,2.72497111416377,2.75765262675021,2.889207461421,4.73880631649457,2.24643446714271,3.28506375292937,3.29523089857312,2.45214243801899,3.27745276144588,3.3293079250532,3.56099907524802,3.33405583898152,2.0859178670074,2.70072908649187,4.12085900803307,3.23837624295674,2.40008476669791,3.37204031702741,3.57654284920981,3.19762116591123,3.10560955370591,3.04612588410035,2.92684756596436,3.15683653725411,2.17286582153379,3.92799590160417,3.32178050747688,2.85662998889134,4.50154147486658,2.78886314134739,4.05103883060397,2.99772693525535,1.63752125911786,3.00819475667618,0.57386499620653,1.32354851471709,0.927471342481686|short_description=p2@Ptgds}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19215 | |||
|HGNC= | |||
|MCL_coexpression_id=329 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000137417_5end | |||
|cluster_id=chr2:25324643..25324713,- | |||
|description=CAGE_peak_2_at_Ptgds_5end | |||
|id=chr2:25324643..25324713,- | |||
|ontology_enrichment_celltype=CL:0000221!2.11e-07!44;CL:0000133!2.11e-07!44;CL:0002319!5.39e-07!43 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.28e-19!73;UBERON:0005743!3.28e-19!73;UBERON:0000033!1.44e-18!63;UBERON:0000073!3.98e-18!75;UBERON:0001016!3.98e-18!75;UBERON:0004121!4.70e-18!102;UBERON:0000924!4.70e-18!102;UBERON:0006601!4.70e-18!102;UBERON:0002346!1.96e-16!71;UBERON:0003075!1.96e-16!71;UBERON:0007284!1.96e-16!71;UBERON:0000955!8.81e-15!50;UBERON:0006238!8.81e-15!50;UBERON:0002616!2.97e-14!49;UBERON:0001049!5.17e-14!52;UBERON:0005068!5.17e-14!52;UBERON:0006241!5.17e-14!52;UBERON:0007135!5.17e-14!52;UBERON:0003056!1.43e-13!49;UBERON:0003080!9.77e-10!40;UBERON:0002780!3.28e-09!39;UBERON:0001890!3.28e-09!39;UBERON:0006240!3.28e-09!39;UBERON:0007811!2.07e-08!86;UBERON:0002020!4.53e-07!34;UBERON:0000025!5.71e-07!114;UBERON:0000153!7.89e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.22e-21,92;UBERON:0001017,2.27e-18,73;UBERON:0004121,6.26e-18,95;UBERON:0000924,6.26e-18,95;UBERON:0006601,6.26e-18,95;UBERON:0002346,7.83e-18,64;UBERON:0003075,7.83e-18,64;UBERON:0007284,7.83e-18,64;UBERON:0001016,2.99e-17,75;UBERON:0010371,2.78e-15,73;UBERON:0000073,1.43e-13,54;UBERON:0001049,8.86e-13,52;UBERON:0005068,8.86e-13,52;UBERON:0006241,8.86e-13,52;UBERON:0007135,8.86e-13,52;UBERON:0003056,1.10e-12,49;UBERON:0000955,1.43e-12,47;UBERON:0006238,1.43e-12,47;UBERON:0002616,5.17e-12,46;UBERON:0003080,1.51e-08,40;UBERON:0002780,5.34e-08,39;UBERON:0001890,5.34e-08,39;UBERON:0006240,5.34e-08,39 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.22867966284093,6.25532992565577,6.00759515019551,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,30.5132624295735,19.6222640742402,1.5378032791413,3.69416808241138,5.03951117851305,2.87505128729943,0,0,0,0,0,0,0.202316460859598,1.05798195854407,1.90149421051854,0.338844532069132,1.77858959222228,0,0,0,4.49400165777607,5.76327457982332,0.311068836925433,0.540023753326763,1.68259969081106,3.71346279724945,7.28866185140325,2.32732518508413,1.62937300731002,0.919218786610021,6.60695285996332,16.0886045987337,7.37311359629969,0.263772575460388,1.00636407962651,2.08365348222704,28.4766658981409,41.6444331423443,27.1980881042722,1.76777151284201,1.13897344639282,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,2.10666630197628,0,0,0,16.1969932743183,0,0,0,0,0,0,1.25602267690966,0,0,1.73485326766136,0.304465478312141,0.230615497256059,0.150722640552623,2.3517741427141,0,0,0,0,0.161766849947409,0,0,0,18.1524094147159,21.9919042154128,0,0,0,0,26.213361895844,18.7575247155637,0.376963056338593,18.7730265807659,13.5529192385075,15.1685272528479,22.5515355664183,6.82323737797119,2.48813941220186,43.468314450592,22.3068367239662,1.04096354370163,6.20735681970377,8.10279584124071,14.4676625122286,19.9346942513391,17.6796933993093,21.3639931996182,44.7556831378497,0,0.189106080167819,0,0.657587197282725,0.278047249225598,0,0.823128545631774,10.7478504081986,0,0,0,0,0.234526059981096,4.50155153652537,13.0209604571866,40.92696020346,67.7232625575591,148.821724640261,191.278935197928,202.354338322305,100.875187996964,45.9668899421467,9.40398190731926,11.1111990443253,26.126463719635,84.818456656555,16.4026159880019,6.07137213037778,0,0,0.426576501070468,0.696710015581316,1.15980715189884,0.403367049246685,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0,0,0,0,0,0,0.571242563048644,0,2.64746726198909,1.16371492300575,0.49095073923223,6.57659986092276,4.57591458736767,2.82597710114475,2.22114895059241,0,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.568474235311454,0.651859905768103,2.03694102930226,2.11221223459652,3.85264392116176,0.476087281772027,0.585400943573396,0.315270288212382,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,23.2798355482298,43.4855357257074,0,0.252470927204373,1.89304931649754,3.90438744296638,2.36965737506079,3.58453196928828,3.11918143715352,2.54768877709949,6.8817819284732,5.84511715822624,6.7198922250909,17.9939937196212,0,15.8478387263857,7.81857404897165,0.494910368917606,0,2.42780636154981,5.44182402536552,2.07465587731488,1.47650946440386,0.922305443831782,0.516856586336442,0,0.712994756769443,0,0,1.03135543248187,0.340439605753788,0.36012218806262,8.27895576209629,10.7168517515796,12.5911565886014,13.0209236849512,6.74650984468696,2.74018454203139,0.469343416127421,0,0,0.16488625294148,0.968786560175433,1.20625849856312,0.954978752025092,0.492422699235184,0,21.1384844291981,0,2.47664241555867,0.185194527369712,0,0,0,0.509935289981566,0.279902904647316,0.276399947608848,0,0.316335993581135,1.82987520414164,0.540026704109006,1.04544148007234,0.436725127492355,0,0,0,0,0,9.01908701894705,42.163665984402,49.3066301562151,42.7792614356905,50.1140115093597,55.2486530354845,28.7525234682097,7.42164993610516,0.419437377702843,0,0.576060012515731,0,0,0,0,0.179026695667481,0.596044064343795,0,0.295379054349154,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,2.25900737046827,3.22227665555024,2.86447756719698,1.71853182343688,7.53590771747707,7.55393897389701,8.77529250301348,9.90706647093285,9.5159905886683,11.9084871702919,0,0,0.682934423016537,1.21553358534147,2.72497111416377,2.75765262675021,2.889207461421,4.73880631649457,2.24643446714271,3.28506375292937,3.29523089857312,2.45214243801899,3.27745276144588,3.3293079250532,3.56099907524802,3.33405583898152,2.0859178670074,2.70072908649187,4.12085900803307,3.23837624295674,2.40008476669791,3.37204031702741,3.57654284920981,3.19762116591123,3.10560955370591,3.04612588410035,2.92684756596436,3.15683653725411,2.17286582153379,3.92799590160417,3.32178050747688,2.85662998889134,4.50154147486658,2.78886314134739,4.05103883060397,2.99772693525535,1.63752125911786,3.00819475667618,0.57386499620653,1.32354851471709,0.927471342481686 | |||
|short_description=p2@Ptgds | |||
}} |
Revision as of 20:52, 4 August 2015
Short description: | p2@Ptgds |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptgds_5end |
Coexpression cluster: | MCL_coexpression_mm9:329 |
Association with transcript: | 0bp_to_ENSMUST00000137417_5end |
EntrezGene: | 19215 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.22e-21 | 92 |
central nervous system | 2.27e-18 | 73 |
ectoderm-derived structure | 6.26e-18 | 95 |
ectoderm | 6.26e-18 | 95 |
presumptive ectoderm | 6.26e-18 | 95 |
neurectoderm | 7.83e-18 | 64 |
neural plate | 7.83e-18 | 64 |
presumptive neural plate | 7.83e-18 | 64 |
nervous system | 2.99e-17 | 75 |
ecto-epithelium | 2.78e-15 | 73 |
regional part of nervous system | 1.43e-13 | 54 |
neural tube | 8.86e-13 | 52 |
neural rod | 8.86e-13 | 52 |
future spinal cord | 8.86e-13 | 52 |
neural keel | 8.86e-13 | 52 |
pre-chordal neural plate | 1.10e-12 | 49 |
brain | 1.43e-12 | 47 |
future brain | 1.43e-12 | 47 |
regional part of brain | 5.17e-12 | 46 |
anterior neural tube | 1.51e-08 | 40 |
regional part of forebrain | 5.34e-08 | 39 |
forebrain | 5.34e-08 | 39 |
future forebrain | 5.34e-08 | 39 |