FFCP PHASE1:Mm9::chr6:113640487..113640495,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:113640487..113640495,-|id=chr6:113640487..113640495,-|ontology_enrichment_celltype=CL:0000066!5.51e-19!25;CL:0000223!8.12e-17!20;CL:0002076!1.33e-14!15;CL:0002563!1.78e-14!9;CL:0002251!1.78e-14!9;CL:0002250!4.65e-12!3;CL:0000063!6.36e-07!66|ontology_enrichment_celltype_v019_2=CL:0002250,4.03e-30,3;CL:0002563,1.19e-22,9;CL:0002251,1.19e-22,9;CL:0000213,1.39e-22,1;CL:0002078,1.39e-22,1;CL:0000115,1.39e-22,1;CL:0002262,1.39e-22,1;CL:1000398,1.39e-22,1;CL:0000223,3.40e-18,20;CL:0000066,9.61e-15,25;CL:0002076,5.35e-14,15;CL:0000215,1.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!1.78e-14!9;UBERON:0004808!1.78e-14!9;UBERON:0001277!1.78e-14!9;UBERON:0000485!9.87e-12!11;UBERON:0001242!7.90e-10!13;UBERON:0000060!7.90e-10!13;UBERON:0001262!7.90e-10!13;UBERON:0004786!7.90e-10!13;UBERON:0000344!1.97e-08!15|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.19e-22,9;UBERON:0004808,1.19e-22,9;UBERON:0001277,1.19e-22,9;UBERON:0002394,1.39e-22,1;UBERON:0001281,1.39e-22,1;UBERON:0000353,1.39e-22,1;UBERON:0003497,1.39e-22,1;UBERON:0003909,1.39e-22,1;UBERON:0003928,1.39e-22,1;UBERON:0003835,1.39e-22,1;UBERON:0003513,1.39e-22,1;UBERON:0001280,1.39e-22,1;UBERON:0004647,1.39e-22,1;UBERON:0002294,1.39e-22,1;UBERON:0001173,1.39e-22,1;UBERON:0004912,1.39e-22,1;UBERON:0005171,1.39e-22,1;UBERON:0000485,1.00e-18,11;UBERON:0001242,5.32e-16,13;UBERON:0001262,5.32e-16,13;UBERON:0004786,5.32e-16,13;UBERON:0000344,5.35e-14,15;UBERON:0004923,4.35e-09,24;UBERON:0000160,3.20e-07,31;UBERON:0003929,3.83e-07,55|phase1_expression=0,0,0.454999239389536,1.20985684522732,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86152399231815,0.215471232685889,0,0,0,0,0,0,3.46621943701529,0.498703936075477,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0.539703191637817,0,0,0,0,0.519572009205738,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0,0.276399947608848,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:113640487..113640495,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:113640487..113640495,- | |||
|description=CAGE_peak_at_chr6:113640487..113640495,- | |||
|id=chr6:113640487..113640495,- | |||
|ontology_enrichment_celltype=CL:0000066!5.51e-19!25;CL:0000223!8.12e-17!20;CL:0002076!1.33e-14!15;CL:0002563!1.78e-14!9;CL:0002251!1.78e-14!9;CL:0002250!4.65e-12!3;CL:0000063!6.36e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,4.03e-30,3;CL:0002563,1.19e-22,9;CL:0002251,1.19e-22,9;CL:0000213,1.39e-22,1;CL:0002078,1.39e-22,1;CL:0000115,1.39e-22,1;CL:0002262,1.39e-22,1;CL:1000398,1.39e-22,1;CL:0000223,3.40e-18,20;CL:0000066,9.61e-15,25;CL:0002076,5.35e-14,15;CL:0000215,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!1.78e-14!9;UBERON:0004808!1.78e-14!9;UBERON:0001277!1.78e-14!9;UBERON:0000485!9.87e-12!11;UBERON:0001242!7.90e-10!13;UBERON:0000060!7.90e-10!13;UBERON:0001262!7.90e-10!13;UBERON:0004786!7.90e-10!13;UBERON:0000344!1.97e-08!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.19e-22,9;UBERON:0004808,1.19e-22,9;UBERON:0001277,1.19e-22,9;UBERON:0002394,1.39e-22,1;UBERON:0001281,1.39e-22,1;UBERON:0000353,1.39e-22,1;UBERON:0003497,1.39e-22,1;UBERON:0003909,1.39e-22,1;UBERON:0003928,1.39e-22,1;UBERON:0003835,1.39e-22,1;UBERON:0003513,1.39e-22,1;UBERON:0001280,1.39e-22,1;UBERON:0004647,1.39e-22,1;UBERON:0002294,1.39e-22,1;UBERON:0001173,1.39e-22,1;UBERON:0004912,1.39e-22,1;UBERON:0005171,1.39e-22,1;UBERON:0000485,1.00e-18,11;UBERON:0001242,5.32e-16,13;UBERON:0001262,5.32e-16,13;UBERON:0004786,5.32e-16,13;UBERON:0000344,5.35e-14,15;UBERON:0004923,4.35e-09,24;UBERON:0000160,3.20e-07,31;UBERON:0003929,3.83e-07,55 | |||
|phase1_expression=0,0,0.454999239389536,1.20985684522732,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86152399231815,0.215471232685889,0,0,0,0,0,0,3.46621943701529,0.498703936075477,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0.539703191637817,0,0,0,0,0.519572009205738,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0,0.276399947608848,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:113640487..113640495,- | |||
}} |
Latest revision as of 22:21, 4 August 2015
Short description: | p@chr6:113640487..113640495, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:113640487..113640495, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 4.03e-30 | 3 |
intestinal epithelial cell | 1.19e-22 | 9 |
epithelial cell of alimentary canal | 1.19e-22 | 9 |
lining cell | 1.39e-22 | 1 |
meso-epithelial cell | 1.39e-22 | 1 |
endothelial cell | 1.39e-22 | 1 |
endothelial cell of sinusoid | 1.39e-22 | 1 |
endothelial cell of hepatic sinusoid | 1.39e-22 | 1 |
endodermal cell | 3.40e-18 | 20 |
epithelial cell | 9.61e-15 | 25 |
endo-epithelial cell | 5.35e-14 | 15 |
barrier cell | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.19e-22 | 9 |
gastrointestinal system epithelium | 1.19e-22 | 9 |
intestinal epithelium | 1.19e-22 | 9 |
bile duct | 1.39e-22 | 1 |
hepatic sinusoid | 1.39e-22 | 1 |
parenchyma | 1.39e-22 | 1 |
abdomen blood vessel | 1.39e-22 | 1 |
sinusoid | 1.39e-22 | 1 |
digestive system duct | 1.39e-22 | 1 |
abdominal segment blood vessel | 1.39e-22 | 1 |
trunk blood vessel | 1.39e-22 | 1 |
liver parenchyma | 1.39e-22 | 1 |
liver lobule | 1.39e-22 | 1 |
biliary system | 1.39e-22 | 1 |
biliary tree | 1.39e-22 | 1 |
biliary bud | 1.39e-22 | 1 |
hepatic duct | 1.39e-22 | 1 |
simple columnar epithelium | 1.00e-18 | 11 |
intestinal mucosa | 5.32e-16 | 13 |
wall of intestine | 5.32e-16 | 13 |
gastrointestinal system mucosa | 5.32e-16 | 13 |
mucosa | 5.35e-14 | 15 |
organ component layer | 4.35e-09 | 24 |
intestine | 3.20e-07 | 31 |
gut epithelium | 3.83e-07 | 55 |