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FFCP PHASE1:Mm9::chr12:77923497..77923545,-: Difference between revisions

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{{FFCP|EntrezGene=104886|HGNC=|UniProt=Q3TYH2,Q3TYB1|association_with_transcript=0bp_to_ENSMUST00000021459,NM_134050,uc007nyt.2_5end|description=CAGE_peak_2_at_Rab15_5end|id=chr12:77923497..77923545,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.85e-15!63;UBERON:0004121!2.64e-15!102;UBERON:0000924!2.64e-15!102;UBERON:0006601!2.64e-15!102;UBERON:0001049!2.76e-14!52;UBERON:0005068!2.76e-14!52;UBERON:0006241!2.76e-14!52;UBERON:0007135!2.76e-14!52;UBERON:0000955!5.93e-13!50;UBERON:0006238!5.93e-13!50;UBERON:0001017!8.38e-13!73;UBERON:0005743!8.38e-13!73;UBERON:0002616!1.12e-12!49;UBERON:0000073!2.29e-12!75;UBERON:0001016!2.29e-12!75;UBERON:0002346!6.02e-12!71;UBERON:0003075!6.02e-12!71;UBERON:0007284!6.02e-12!71;UBERON:0003056!1.05e-11!49;UBERON:0003080!4.17e-11!40;UBERON:0002780!1.12e-10!39;UBERON:0001890!1.12e-10!39;UBERON:0006240!1.12e-10!39;UBERON:0002020!5.41e-10!34;UBERON:0000153!1.53e-08!94;UBERON:0007811!3.03e-08!86;UBERON:0002791!5.07e-08!29;UBERON:0003528!5.07e-08!29;UBERON:0001893!5.07e-08!29;UBERON:0002021!1.14e-07!10;UBERON:0000411!1.14e-07!10;UBERON:0001950!1.14e-07!10;UBERON:0000468!9.10e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.69e-17,95;UBERON:0000924,2.69e-17,95;UBERON:0006601,2.69e-17,95;UBERON:0010371,3.38e-17,73;UBERON:0000073,9.42e-15,54;UBERON:0001049,3.08e-14,52;UBERON:0005068,3.08e-14,52;UBERON:0006241,3.08e-14,52;UBERON:0007135,3.08e-14,52;UBERON:0002346,3.70e-14,64;UBERON:0003075,3.70e-14,64;UBERON:0007284,3.70e-14,64;UBERON:0001017,8.97e-13,73;UBERON:0001016,2.46e-12,75;UBERON:0000955,3.81e-12,47;UBERON:0006238,3.81e-12,47;UBERON:0002616,7.17e-12,46;UBERON:0003056,1.47e-11,49;UBERON:0003080,6.18e-11,40;UBERON:0002780,1.67e-10,39;UBERON:0001890,1.67e-10,39;UBERON:0006240,1.67e-10,39;UBERON:0002020,8.35e-10,34;UBERON:0003528,7.97e-08,29;UBERON:0002791,7.97e-08,29;UBERON:0001893,7.97e-08,29;UBERON:0002021,9.49e-08,10;UBERON:0000411,9.49e-08,10;UBERON:0001950,9.49e-08,10;UBERON:0011216,4.21e-07,194|phase1_expression=13.4525031568027,1.04692622291808,2.72999543633722,0,0.500895729946347,24.1746151553121,27.7999042308676,0,0.140788722151667,0,0,0.0797721589953364,0,0,0.666219523631325,0,0,0,0,0,6.88850650223665,0.0992909512008853,0,6.71968175732308,5.73523202667925,4.01962374880514,9.04600191934057,10.7735616342945,9.5011709728187,8.56902441183765,20.6209374909433,0,0,0,8.37669697278696,9.14290549471708,5.51257261908397,0.418531630736908,0,0,0.588231488031014,0,0,0.125896817975577,0,0,7.82391344348039,0,0.659058548203415,0.388859798148567,4.05960622713551,1.43752564364972,0,0,0,2.57259436035947,1.43266719969378,1.54701627683233,10.3181395038395,10.0508286061686,9.50747105259269,8.13226876965917,8.00365316500025,0,0,0.7104801149461,2.09720077362883,2.68952813725088,2.48855069540346,3.37514845829227,3.36519938162211,15.7108041422092,16.3442720304194,4.77714116938321,3.73797336971122,5.51531271966013,6.60695285996332,10.0872997087298,11.8277030607307,11.4741070325269,10.7040543014819,12.5019208933622,13.959149950069,11.8180148106653,15.279824777681,13.8475435172624,11.5321061447273,10.2519695203915,2.34751199332871,4.45872204630035,0.579728977403356,0,0,0,0,0,3.65155492342555,0,0,0,19.5772353489586,0,0,0,24.0305055522448,17.988550448732,25.7817466957539,3.31133251185274,0,0.890652834388949,2.94925055502431,2.74018930480927,3.45923245884088,3.01445281105245,2.82212897125692,1.50799909595611,18.0452326446093,0.289198713839823,0,3.23533699894818,1.54589062922275,1.45462575940567,11.1835056730873,12.0040126774734,12.7762491156208,7.91916871146633,0.11981512450592,0.599902730993408,0.381210681219194,13.6309481858389,32.0250421973039,11.5602003943835,33.2004451567248,39.1244649715406,13.714010940931,23.6872244078926,5.49932564791708,2.86136032403214,4.54900965180614,14.5204880561667,6.63614259109789,5.9774547152703,9.90341713929421,8.13806016312861,5.23881043465224,3.71529788826064,5.62210347358373,6.98499100995342,4.31135985865684,5.48407632486676,6.51019159406611,10.5213951565236,9.73165372289593,8.358051996532,5.96768195583036,2.58744546864041,0,0,0,1.44988040774851,1.40715635988658,0.180062061461015,1.18372367792605,1.77087808572663,1.69693824176116,0.930135779001631,0.536546802799238,1.05088808130453,1.97471819896177,0.656669856316381,1.13496333364198,0.438599962275997,1.09775057645525,0.671032093801859,30.9126224389267,6.79170441703277,2.64335026387038,3.96675849995316,5.33220626338085,5.57368012465052,8.11865006329188,6.85723983719365,4.22518283305254,4.75564065281398,4.2707615539006,5.10566759644434,6.78605063760728,5.37182474511107,3.8992817423824,5.39291645192533,7.3486936957396,6.17337947088538,4.1726938209678,5.02693455482807,1.1270773567308,2.64746726198909,3.29719228184964,4.55882829287071,4.61626721007078,4.28069429140846,1.8839847340965,1.60416313098341,0,0.83422552858047,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:104886
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q3TYH2,uniprot:Q3TYB1
|association_with_transcript=0bp_to_ENSMUST00000021459,NM_134050,uc007nyt.2_5end
|cluster_id=chr12:77923497..77923545,-
|description=CAGE_peak_2_at_Rab15_5end
|id=chr12:77923497..77923545,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.85e-15!63;UBERON:0004121!2.64e-15!102;UBERON:0000924!2.64e-15!102;UBERON:0006601!2.64e-15!102;UBERON:0001049!2.76e-14!52;UBERON:0005068!2.76e-14!52;UBERON:0006241!2.76e-14!52;UBERON:0007135!2.76e-14!52;UBERON:0000955!5.93e-13!50;UBERON:0006238!5.93e-13!50;UBERON:0001017!8.38e-13!73;UBERON:0005743!8.38e-13!73;UBERON:0002616!1.12e-12!49;UBERON:0000073!2.29e-12!75;UBERON:0001016!2.29e-12!75;UBERON:0002346!6.02e-12!71;UBERON:0003075!6.02e-12!71;UBERON:0007284!6.02e-12!71;UBERON:0003056!1.05e-11!49;UBERON:0003080!4.17e-11!40;UBERON:0002780!1.12e-10!39;UBERON:0001890!1.12e-10!39;UBERON:0006240!1.12e-10!39;UBERON:0002020!5.41e-10!34;UBERON:0000153!1.53e-08!94;UBERON:0007811!3.03e-08!86;UBERON:0002791!5.07e-08!29;UBERON:0003528!5.07e-08!29;UBERON:0001893!5.07e-08!29;UBERON:0002021!1.14e-07!10;UBERON:0000411!1.14e-07!10;UBERON:0001950!1.14e-07!10;UBERON:0000468!9.10e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.69e-17,95;UBERON:0000924,2.69e-17,95;UBERON:0006601,2.69e-17,95;UBERON:0010371,3.38e-17,73;UBERON:0000073,9.42e-15,54;UBERON:0001049,3.08e-14,52;UBERON:0005068,3.08e-14,52;UBERON:0006241,3.08e-14,52;UBERON:0007135,3.08e-14,52;UBERON:0002346,3.70e-14,64;UBERON:0003075,3.70e-14,64;UBERON:0007284,3.70e-14,64;UBERON:0001017,8.97e-13,73;UBERON:0001016,2.46e-12,75;UBERON:0000955,3.81e-12,47;UBERON:0006238,3.81e-12,47;UBERON:0002616,7.17e-12,46;UBERON:0003056,1.47e-11,49;UBERON:0003080,6.18e-11,40;UBERON:0002780,1.67e-10,39;UBERON:0001890,1.67e-10,39;UBERON:0006240,1.67e-10,39;UBERON:0002020,8.35e-10,34;UBERON:0003528,7.97e-08,29;UBERON:0002791,7.97e-08,29;UBERON:0001893,7.97e-08,29;UBERON:0002021,9.49e-08,10;UBERON:0000411,9.49e-08,10;UBERON:0001950,9.49e-08,10;UBERON:0011216,4.21e-07,194
|phase1_expression=13.4525031568027,1.04692622291808,2.72999543633722,0,0.500895729946347,24.1746151553121,27.7999042308676,0,0.140788722151667,0,0,0.0797721589953364,0,0,0.666219523631325,0,0,0,0,0,6.88850650223665,0.0992909512008853,0,6.71968175732308,5.73523202667925,4.01962374880514,9.04600191934057,10.7735616342945,9.5011709728187,8.56902441183765,20.6209374909433,0,0,0,8.37669697278696,9.14290549471708,5.51257261908397,0.418531630736908,0,0,0.588231488031014,0,0,0.125896817975577,0,0,7.82391344348039,0,0.659058548203415,0.388859798148567,4.05960622713551,1.43752564364972,0,0,0,2.57259436035947,1.43266719969378,1.54701627683233,10.3181395038395,10.0508286061686,9.50747105259269,8.13226876965917,8.00365316500025,0,0,0.7104801149461,2.09720077362883,2.68952813725088,2.48855069540346,3.37514845829227,3.36519938162211,15.7108041422092,16.3442720304194,4.77714116938321,3.73797336971122,5.51531271966013,6.60695285996332,10.0872997087298,11.8277030607307,11.4741070325269,10.7040543014819,12.5019208933622,13.959149950069,11.8180148106653,15.279824777681,13.8475435172624,11.5321061447273,10.2519695203915,2.34751199332871,4.45872204630035,0.579728977403356,0,0,0,0,0,3.65155492342555,0,0,0,19.5772353489586,0,0,0,24.0305055522448,17.988550448732,25.7817466957539,3.31133251185274,0,0.890652834388949,2.94925055502431,2.74018930480927,3.45923245884088,3.01445281105245,2.82212897125692,1.50799909595611,18.0452326446093,0.289198713839823,0,3.23533699894818,1.54589062922275,1.45462575940567,11.1835056730873,12.0040126774734,12.7762491156208,7.91916871146633,0.11981512450592,0.599902730993408,0.381210681219194,13.6309481858389,32.0250421973039,11.5602003943835,33.2004451567248,39.1244649715406,13.714010940931,23.6872244078926,5.49932564791708,2.86136032403214,4.54900965180614,14.5204880561667,6.63614259109789,5.9774547152703,9.90341713929421,8.13806016312861,5.23881043465224,3.71529788826064,5.62210347358373,6.98499100995342,4.31135985865684,5.48407632486676,6.51019159406611,10.5213951565236,9.73165372289593,8.358051996532,5.96768195583036,2.58744546864041,0,0,0,1.44988040774851,1.40715635988658,0.180062061461015,1.18372367792605,1.77087808572663,1.69693824176116,0.930135779001631,0.536546802799238,1.05088808130453,1.97471819896177,0.656669856316381,1.13496333364198,0.438599962275997,1.09775057645525,0.671032093801859,30.9126224389267,6.79170441703277,2.64335026387038,3.96675849995316,5.33220626338085,5.57368012465052,8.11865006329188,6.85723983719365,4.22518283305254,4.75564065281398,4.2707615539006,5.10566759644434,6.78605063760728,5.37182474511107,3.8992817423824,5.39291645192533,7.3486936957396,6.17337947088538,4.1726938209678,5.02693455482807,1.1270773567308,2.64746726198909,3.29719228184964,4.55882829287071,4.61626721007078,4.28069429140846,1.8839847340965,1.60416313098341,0,0.83422552858047,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,6.46636165583116,5.87423376488503,10.4297584922897,10.0149600607361,12.4385831592906,12.3954630506944,10.7119638398706,11.9031525193257,7.40885177299098,8.19419351700467,6.53764551495697,6.55453258862952,7.59813920209941,9.69148692496127,0,0,34.9152633843516,30.6289788398253,11.559642479121,11.8383803458125,0,3.7870639080656,3.78609863299508,3.51394869866975,3.01592756825919,2.62865677747807,2.22798674082394,1.98153571552183,2.02405350837447,5.26060544240361,5.53402889125133,9.63963949265421,2.6968616189571,8.19101776869374,4.56083486190013,6.10389454998381,0,5.09839335925461,4.53485335447127,2.26326095707078,1.77181135728464,3.07435147943927,4.39328098385976,2.54473610634254,2.13898427030833,0.632073515871632,1.05418608574999,0,2.7235168460303,10.6236045478473,16.4285528404098,12.0028739617692,7.62563004661776,10.3453914209201,10.5311373185357,8.22055362609418,19.7124234773517,57.1946591332314,43.6646228148825,9.23363016472288,5.48979050766079,6.33285711745637,8.47543642422269,10.3408766839389,4.95517422270746,9.08583979851498,1.02522528478712,1.857481811669,1.66675074632741,0.941842285023455,0.683471138605126,0.686334519619568,0,0.139951452323658,0.138199973804424,4.77335309007557,6.64305586520384,10.1659733563424,15.768779759983,17.1452402731864,14.4119292072477,9.97996163247673,9.25718704123762,5.49687478166462,11.7949625695532,33.552322906694,0,1.19613236835183,1.48912641411388,2.91676782516071,2.84151611651008,2.70329800785245,1.40828686374905,1.0416350787516,0.629156066554265,0,0,3.16011120628178,23.9215754042394,13.2497134742627,6.88580361782314,6.62398773969681,3.77494574084403,4.08664528367894,2.36303243479324,2.22126189885925,2.13379058634,1.71404514732629,2.92373642219257,2.40529604100824,2.68816875017609,8.38902419376282,23.5305110576509,6.2799699626633,19.306730881869,31.1035246391827,2.62755465631655,6.59345847362154,12.2189976075068,60.1886524842436,24.8490810751509,34.0640675015311,34.9466263198032,41.0729105801413,28.773465830367,27.1941803060292,29.0259675099676,28.3702358031259,35.345107900768,33.1366599521165,4.15149390336707,3.99024873401031,3.58540572083682,5.83456120963906,4.61148957781561,8.45680138870065,6.22290837844523,6.38708677440572,6.4183841918363,6.82282471762253,7.60437899670719,7.73367999682912,5.71213195566283,6.72264100251127,6.66251439885114,7.62069906052918,6.48952225291191,8.29509647993932,3.70877310722976,5.4463600449727,5.82877729055206,4.61437096014278,7.62995807831427,6.1045494985578,5.74067220533517,7.53070010235921,7.3171189149109,6.57674278594607,6.51859746460137,2.80571135828869,6.76219603307793,6.40279135441163,4.50154147486658,6.66228417099654,8.8737041051325,7.49431733813838,7.71974307869848,6.66100267549725,6.31251495827183,5.51478547798789,2.78241402744506
|short_description=p2@Rab15
}}

Revision as of 06:34, 5 August 2015

Short description:p2@Rab15
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rab15_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000021459, NM_134050, uc007nyt.2_5end
EntrezGene:104886
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rab15

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I827.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.74
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I210.77
Ileum epithelium, pool1.CNhs13199.10252-104B99.50
Ileum epithelium, pool2.CNhs13232.10253-104C18.57
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C820.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C310.32
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.13
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.74
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.47
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.70
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.25
Mouse Schwann, donor1.CNhs12507.11728-123D92.35
Mouse Schwann, donor2.CNhs12573.11746-123F94.46
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G124.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G217.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G325.78
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A818.05
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B212.00
cerebellum, neonate N30.CNhs11135.1395-42I212.78
colon, adult.CNhs10468.36-18H77.92
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A413.63
corpus striatum, adult.CNhs10487.19-21D832.03
corpus striatum, neonate N00.CNhs11226.630-43F111.56
cortex, adult.CNhs10473.12-14D533.20
cortex, neonate N30.CNhs11107.1392-42F239.12
diencephalon, adult.CNhs10482.20-12F213.71
diencephalon, neonate N30.CNhs11201.1388-42B223.69
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.50
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G414.52
eyeball, embryo E12.CNhs11016.345-16C66.64
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C99.90
eyeball, embryo E17.CNhs11023.1261-18D48.14
eyeball, neonate N00.CNhs11207.633-15C65.24
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G85.62
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E24.31
forelimb, embryo E12.CNhs10600.359-14H25.48
forelimb, embryo E13.CNhs10589.384-1E26.51
forelimb, embryo E14.CNhs10577.413-26A810.52
forelimb, embryo E15.CNhs11007.437-20E79.73
forelimb, embryo E17.CNhs10598.1517-43C48.36
forelimb, embryo E18.CNhs11008.1520-43B55.97
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E830.91
hippocampus, neonate N00.CNhs11228.627-43G16.79
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I55.33
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D88.12
intestine, embryo E16.CNhs10585.463-22H46.86
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F74.76
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E37.35
intestine, neonate N30.CNhs11131.1384-42G16.17
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F85.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G74.56
kidney, neonate N10.CNhs11206.758-6D54.62
kidney, neonate N20.CNhs11113.832-19I14.28
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G25.87
lung, embryo E14.CNhs10604.404-26F810.43
lung, embryo E15.CNhs11020.432-17C510.01
lung, embryo E16.CNhs10998.458-17B612.44
lung, embryo E17.CNhs10605.480-44A612.40
lung, embryo E18.CNhs10583.1287-20I610.71
lung, neonate N00.CNhs11224.640-42C611.90
lung, neonate N06.CNhs11212.683-20E57.41
lung, neonate N07.CNhs11111.715-19A38.19
lung, neonate N10.CNhs11219.750-23E66.54
lung, neonate N20.CNhs11109.822-18A46.55
lung, neonate N25.CNhs11119.1359-25C77.60
lung, neonate N30.CNhs11133.1394-42H29.69
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B634.92
mammary gland, adult pregnant day19.CNhs10476.588-5H230.63
medulla oblongata, adult.CNhs10477.17-12C211.56
medulla oblongata, neonate N30.CNhs11200.1396-42A311.84
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H78.19
ovary, neonate N00.CNhs11217.1299-22I44.56
oviduct, adult pregnant day01.CNhs10500.988-6G66.10
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E610.62
pituitary gland, embryo E13.CNhs11009.370-44C716.43
pituitary gland, embryo E14.CNhs11037.398-44A512.00
pituitary gland, embryo E15.CNhs10592.427-16B97.63
pituitary gland, embryo E16.CNhs11036.449-43F610.35
pituitary gland, embryo E17.CNhs11039.1265-44F510.53
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I719.71
placenta, adult pregnant day17.CNhs10464.577-18G357.19
prostate, adult.CNhs10470.859-1F843.66
skin, adult.CNhs10492.30-1C39.23
skin, neonate N00.CNhs11124.650-25G45.49
skin, neonate N03.CNhs11215.662-22H36.33
skin, neonate N06.CNhs11097.693-20I58.48
skin, neonate N10.CNhs11108.762-6C410.34
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C99.09
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E36.64
stomach, embryo E15.CNhs10603.1252-16G810.17
stomach, embryo E16.CNhs11022.459-17D415.77
stomach, embryo E17.CNhs11006.1035-18D517.15
stomach, embryo E18.CNhs10999.1286-20C614.41
stomach, neonate N03.CNhs11193.1340-24B89.98
stomach, neonate N07.CNhs11210.718-18A99.26
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I111.79
submandibular gland, adult.CNhs10469.59-29C133.55
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I423.92
thymus, embryo E15.CNhs11005.430-45I213.25
thymus, embryo E16.CNhs11002.456-26C56.89
thymus, embryo E17.CNhs10581.478-18C16.62
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F84.09
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G72.41
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B48.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H323.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.28
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G519.31
urinary bladder, adult.CNhs10481.879-12E431.10
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D512.22
vesicular gland, adult.CNhs10491.51-27F860.19
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.85
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A234.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A334.95
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D741.07
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A527.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.37
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A835.35
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.14
whole body, embryo E11.CNhs11014.324-5I84.15
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.72
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.66
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.32
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F98.87
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B37.72
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C66.31
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.69e-1795
ectoderm2.69e-1795
presumptive ectoderm2.69e-1795
ecto-epithelium3.38e-1773
regional part of nervous system9.42e-1554
neural tube3.08e-1452
neural rod3.08e-1452
future spinal cord3.08e-1452
neural keel3.08e-1452
neurectoderm3.70e-1464
neural plate3.70e-1464
presumptive neural plate3.70e-1464
central nervous system8.97e-1373
nervous system2.46e-1275
brain3.81e-1247
future brain3.81e-1247
regional part of brain7.17e-1246
pre-chordal neural plate1.47e-1149
anterior neural tube6.18e-1140
regional part of forebrain1.67e-1039
forebrain1.67e-1039
future forebrain1.67e-1039
gray matter8.35e-1034
brain grey matter7.97e-0829
regional part of telencephalon7.97e-0829
telencephalon7.97e-0829
occipital lobe9.49e-0810
visual cortex9.49e-0810
neocortex9.49e-0810
organ system subdivision4.21e-07194
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