FFCP PHASE1:Mm9::chr1:174430825..174430834,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3249|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:174430825..174430834,-|id=chr1:174430825..174430834,-|ontology_enrichment_celltype=CL:0000063!2.26e-15!66;CL:0000988!2.10e-14!32;CL:0002032!2.10e-14!32;CL:0000037!2.10e-14!32;CL:0000566!2.10e-14!32;CL:0000837!2.10e-14!32;CL:0000034!3.35e-13!97;CL:0002320!9.16e-13!46;CL:0000134!9.16e-13!46;CL:0000144!1.77e-12!121;CL:0000012!1.77e-12!121;CL:0000049!3.11e-12!19;CL:0000723!4.00e-11!91;CL:0000048!4.00e-11!91;CL:0000219!4.61e-10!54;CL:0002371!5.39e-10!118;CL:0000548!1.19e-08!115;CL:0000004!1.19e-08!115;CL:0000255!1.19e-08!115;CL:0000763!6.85e-08!16;CL:0002031!2.76e-07!25;CL:0002563!4.18e-07!9;CL:0002251!4.18e-07!9;CL:0002250!9.13e-07!3|ontology_enrichment_celltype_v019_2=CL:0000049,6.80e-14,19;CL:0002250,1.77e-10,3;CL:0000557,4.03e-10,7;CL:0000034,5.48e-10,97;CL:0002320,9.44e-10,46;CL:0000134,9.44e-10,46;CL:0000213,5.23e-09,1;CL:0002078,5.23e-09,1;CL:0000115,5.23e-09,1;CL:0002262,5.23e-09,1;CL:1000398,5.23e-09,1;CL:0000723,6.56e-09,91;CL:0000048,6.56e-09,91;CL:0000057,1.74e-08,1;CL:0000632,1.74e-08,1;CL:0000219,3.31e-08,54;CL:0000988,3.77e-08,32;CL:0002032,3.77e-08,32;CL:0000037,3.77e-08,32;CL:0000837,3.77e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!9.16e-13!46;UBERON:0003350!4.18e-07!9;UBERON:0004808!4.18e-07!9;UBERON:0001277!4.18e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.44e-10,46;UBERON:0002394,5.23e-09,1;UBERON:0001281,5.23e-09,1;UBERON:0000353,5.23e-09,1;UBERON:0003497,5.23e-09,1;UBERON:0003909,5.23e-09,1;UBERON:0003928,5.23e-09,1;UBERON:0003835,5.23e-09,1;UBERON:0003513,5.23e-09,1;UBERON:0001280,5.23e-09,1;UBERON:0004647,5.23e-09,1;UBERON:0002294,5.23e-09,1;UBERON:0001173,5.23e-09,1;UBERON:0004912,5.23e-09,1;UBERON:0005171,5.23e-09,1|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0.700837921786577,0.129123323441576,0,0.234064526321993,0,0,0,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0.0992909512008853,0.783599367416806,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0,0.635030673459631,0.61506478758457,0,1.73310971850765,0.664938581433969,1.42918549383658,0.418531630736908,3.906676722619,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,1.72084775396277,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,3.23500836165985,8.99854096490112,2.41433431438823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,3.51106593656617,4.37491442095016,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,1.01987057996313,0.979660166265606,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:174430825..174430834,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3249 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:174430825..174430834,- | |||
|description=CAGE_peak_at_chr1:174430825..174430834,- | |||
|id=chr1:174430825..174430834,- | |||
|ontology_enrichment_celltype=CL:0000063!2.26e-15!66;CL:0000988!2.10e-14!32;CL:0002032!2.10e-14!32;CL:0000037!2.10e-14!32;CL:0000566!2.10e-14!32;CL:0000837!2.10e-14!32;CL:0000034!3.35e-13!97;CL:0002320!9.16e-13!46;CL:0000134!9.16e-13!46;CL:0000144!1.77e-12!121;CL:0000012!1.77e-12!121;CL:0000049!3.11e-12!19;CL:0000723!4.00e-11!91;CL:0000048!4.00e-11!91;CL:0000219!4.61e-10!54;CL:0002371!5.39e-10!118;CL:0000548!1.19e-08!115;CL:0000004!1.19e-08!115;CL:0000255!1.19e-08!115;CL:0000763!6.85e-08!16;CL:0002031!2.76e-07!25;CL:0002563!4.18e-07!9;CL:0002251!4.18e-07!9;CL:0002250!9.13e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,6.80e-14,19;CL:0002250,1.77e-10,3;CL:0000557,4.03e-10,7;CL:0000034,5.48e-10,97;CL:0002320,9.44e-10,46;CL:0000134,9.44e-10,46;CL:0000213,5.23e-09,1;CL:0002078,5.23e-09,1;CL:0000115,5.23e-09,1;CL:0002262,5.23e-09,1;CL:1000398,5.23e-09,1;CL:0000723,6.56e-09,91;CL:0000048,6.56e-09,91;CL:0000057,1.74e-08,1;CL:0000632,1.74e-08,1;CL:0000219,3.31e-08,54;CL:0000988,3.77e-08,32;CL:0002032,3.77e-08,32;CL:0000037,3.77e-08,32;CL:0000837,3.77e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.16e-13!46;UBERON:0003350!4.18e-07!9;UBERON:0004808!4.18e-07!9;UBERON:0001277!4.18e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.44e-10,46;UBERON:0002394,5.23e-09,1;UBERON:0001281,5.23e-09,1;UBERON:0000353,5.23e-09,1;UBERON:0003497,5.23e-09,1;UBERON:0003909,5.23e-09,1;UBERON:0003928,5.23e-09,1;UBERON:0003835,5.23e-09,1;UBERON:0003513,5.23e-09,1;UBERON:0001280,5.23e-09,1;UBERON:0004647,5.23e-09,1;UBERON:0002294,5.23e-09,1;UBERON:0001173,5.23e-09,1;UBERON:0004912,5.23e-09,1;UBERON:0005171,5.23e-09,1 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0.700837921786577,0.129123323441576,0,0.234064526321993,0,0,0,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0.0992909512008853,0.783599367416806,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0,0.635030673459631,0.61506478758457,0,1.73310971850765,0.664938581433969,1.42918549383658,0.418531630736908,3.906676722619,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,1.72084775396277,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,3.23500836165985,8.99854096490112,2.41433431438823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,3.51106593656617,4.37491442095016,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,1.01987057996313,0.979660166265606,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:174430825..174430834,- | |||
}} |
Latest revision as of 07:46, 5 August 2015
Short description: | p@chr1:174430825..174430834, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:174430825..174430834, - |
Coexpression cluster: | MCL_coexpression_mm9:3249 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 6.80e-14 | 19 |
intestinal crypt stem cell | 1.77e-10 | 3 |
granulocyte monocyte progenitor cell | 4.03e-10 | 7 |
stem cell | 5.48e-10 | 97 |
connective tissue cell | 9.44e-10 | 46 |
mesenchymal cell | 9.44e-10 | 46 |
lining cell | 5.23e-09 | 1 |
meso-epithelial cell | 5.23e-09 | 1 |
endothelial cell | 5.23e-09 | 1 |
endothelial cell of sinusoid | 5.23e-09 | 1 |
endothelial cell of hepatic sinusoid | 5.23e-09 | 1 |
somatic stem cell | 6.56e-09 | 91 |
multi fate stem cell | 6.56e-09 | 91 |
fibroblast | 1.74e-08 | 1 |
hepatic stellate cell | 1.74e-08 | 1 |
motile cell | 3.31e-08 | 54 |
hematopoietic cell | 3.77e-08 | 32 |
hematopoietic oligopotent progenitor cell | 3.77e-08 | 32 |
hematopoietic stem cell | 3.77e-08 | 32 |
hematopoietic multipotent progenitor cell | 3.77e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.44e-10 | 46 |
bile duct | 5.23e-09 | 1 |
hepatic sinusoid | 5.23e-09 | 1 |
parenchyma | 5.23e-09 | 1 |
abdomen blood vessel | 5.23e-09 | 1 |
sinusoid | 5.23e-09 | 1 |
digestive system duct | 5.23e-09 | 1 |
abdominal segment blood vessel | 5.23e-09 | 1 |
trunk blood vessel | 5.23e-09 | 1 |
liver parenchyma | 5.23e-09 | 1 |
liver lobule | 5.23e-09 | 1 |
biliary system | 5.23e-09 | 1 |
biliary tree | 5.23e-09 | 1 |
biliary bud | 5.23e-09 | 1 |
hepatic duct | 5.23e-09 | 1 |