FFCP PHASE1:Mm9::chr1:60803273..60803321,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=100048845,12487|HGNC=|MCL_coexpression_id=118|UniProt=|association_with_transcript=27bp_to_ENSMUST00000153207_5end|description=CAGE_peak_2_at_Cd28_5end,CAGE_peak_2_at_LOC100048845_5end|id=chr1:60803273..60803321,+|ontology_enrichment_celltype=CL:0000988!1.06e-12!32;CL:0002032!1.06e-12!32;CL:0000037!1.06e-12!32;CL:0000566!1.06e-12!32;CL:0000837!1.06e-12!32;CL:0000838!5.08e-11!12;CL:0000084!5.17e-11!11;CL:0000827!5.17e-11!11;CL:0002031!6.23e-10!25;CL:0000542!8.78e-10!13;CL:0000051!8.78e-10!13;CL:0000791!1.35e-09!9;CL:0000789!1.35e-09!9;CL:0002420!1.35e-09!9;CL:0002419!1.35e-09!9;CL:0000790!1.35e-09!9;CL:0000738!3.49e-09!17;CL:0002087!3.49e-09!17;CL:0000624!1.07e-08!8;CL:0002320!1.17e-07!46;CL:0000134!1.17e-07!46;CL:0000893!7.18e-07!6;CL:0002489!7.18e-07!6;CL:0000898!7.18e-07!6;CL:0000809!7.18e-07!6;CL:0000810!7.18e-07!6;CL:0000895!7.18e-07!6;CL:0000808!7.18e-07!6;CL:0000894!7.18e-07!6;CL:0000806!7.18e-07!6;CL:0000807!7.18e-07!6;CL:0000805!7.18e-07!6;CL:0002425!7.18e-07!6;CL:0002436!7.18e-07!6;CL:0002427!7.18e-07!6;CL:0002428!7.18e-07!6;CL:0002429!7.18e-07!6;CL:0002433!7.18e-07!6;CL:0002431!7.18e-07!6;CL:0002432!7.18e-07!6|ontology_enrichment_celltype_v019_2=CL:0000084,6.85e-22,11;CL:0000827,6.85e-22,11;CL:0000988,8.62e-22,32;CL:0002032,8.62e-22,32;CL:0000037,8.62e-22,32;CL:0000837,8.62e-22,32;CL:0000838,7.89e-20,12;CL:0002031,2.25e-19,25;CL:0000791,7.76e-19,9;CL:0000789,7.76e-19,9;CL:0002420,7.76e-19,9;CL:0002419,7.76e-19,9;CL:0000790,7.76e-19,9;CL:0000738,3.26e-18,17;CL:0002087,3.26e-18,17;CL:0000542,4.37e-18,13;CL:0000051,4.37e-18,13;CL:0000624,6.67e-17,8;CL:0002320,1.53e-16,46;CL:0000134,1.53e-16,46;CL:0000219,3.29e-13,54;CL:0000893,5.43e-13,6;CL:0002489,5.43e-13,6;CL:0000898,5.43e-13,6;CL:0000809,5.43e-13,6;CL:0000810,5.43e-13,6;CL:0000895,5.43e-13,6;CL:0000808,5.43e-13,6;CL:0000894,5.43e-13,6;CL:0000806,5.43e-13,6;CL:0000807,5.43e-13,6;CL:0000805,5.43e-13,6;CL:0002425,5.43e-13,6;CL:0002436,5.43e-13,6;CL:0002427,5.43e-13,6;CL:0002428,5.43e-13,6;CL:0002429,5.43e-13,6;CL:0002433,5.43e-13,6;CL:0002431,5.43e-13,6;CL:0002432,5.43e-13,6;CL:0000049,3.31e-07,19;CL:0000034,4.88e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.54e-21!45;UBERON:0003061!9.54e-21!45;UBERON:0002193!5.59e-20!48;UBERON:0004177!3.27e-16!29;UBERON:0003081!4.41e-13!88;UBERON:0002370!5.08e-13!23;UBERON:0000974!5.08e-13!23;UBERON:0004807!5.08e-13!23;UBERON:0005058!5.08e-13!23;UBERON:0003351!5.08e-13!23;UBERON:0009113!5.08e-13!23;UBERON:0003295!5.08e-13!23;UBERON:0009722!5.08e-13!23;UBERON:0005562!5.08e-13!23;UBERON:0007690!5.08e-13!23;UBERON:0006562!4.01e-12!24;UBERON:0003408!4.01e-12!24;UBERON:0001557!4.01e-12!24;UBERON:0001042!4.01e-12!24;UBERON:0008814!4.01e-12!24;UBERON:0009145!4.01e-12!24;UBERON:0000065!3.16e-11!41;UBERON:0001004!1.07e-10!42;UBERON:0002405!3.12e-10!70;UBERON:0000072!7.30e-10!27;UBERON:0002384!1.17e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.48e-35,45;UBERON:0003061,7.48e-35,45;UBERON:0002193,1.15e-34,48;UBERON:0002405,1.15e-34,48;UBERON:0004177,3.82e-29,29;UBERON:0005057,3.82e-29,29;UBERON:0002370,5.89e-29,23;UBERON:0000974,5.89e-29,23;UBERON:0004807,5.89e-29,23;UBERON:0005058,5.89e-29,23;UBERON:0003351,5.89e-29,23;UBERON:0009113,5.89e-29,23;UBERON:0003295,5.89e-29,23;UBERON:0009722,5.89e-29,23;UBERON:0005562,5.89e-29,23;UBERON:0007690,5.89e-29,23;UBERON:0006562,1.59e-27,24;UBERON:0003408,1.59e-27,24;UBERON:0001557,1.59e-27,24;UBERON:0001042,1.59e-27,24;UBERON:0008814,1.59e-27,24;UBERON:0009145,1.59e-27,24;UBERON:0000077,3.35e-25,35;UBERON:0000072,7.25e-24,27;UBERON:0000065,4.25e-17,41;UBERON:0007811,1.43e-16,36;UBERON:0001004,1.49e-16,42;UBERON:0002384,1.53e-16,46;UBERON:0003081,2.96e-15,87;UBERON:0000153,4.97e-13,43;UBERON:0000926,1.23e-09,120;UBERON:0004120,1.23e-09,120;UBERON:0006603,1.23e-09,120;UBERON:0003929,4.26e-09,55;UBERON:0001041,1.69e-08,80;UBERON:0002368,6.15e-08,60;UBERON:0005911,6.23e-08,69;UBERON:0002371,2.83e-07,16;UBERON:0002530,5.76e-07,65;UBERON:0000490,8.63e-07,66|phase1_expression=0,0,0,0,0,0,0,63.0121818394892,64.9036009119184,51.4941957908386,19.3476304094821,14.2792164601652,64.885076643927,56.9981023771863,0.666219523631325,1.01237633694913,0,5.99378114180652,5.34746291062381,3.39511721438424,1.27564935226605,8.83689465687879,4.70159620450084,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,43.5217285206807,44.3643814868052,0,0,0,0,0,0,0,0,1.7997994345628,4.94433181283487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.48439043634778,15.5362730188303,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0,0.510914110417183,2.63593273913025,1.19980546198682,2.92261522268049,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0.702213187313235,0.772043721344145,1.13665399758237,0,0,0,0,0,0,0,0,0.467061369468678,0,0.32833492815819,0.0810688095458557,0.292399974850665,0,0.402619256281115,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.493588655687202,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,3.32555742299888,0,0,0,0,0.502518772325447,0,0.390267295715598,0.472905432318573,0.44292937929755,0.318909537314974,1.14704320301017,0.518054945597687,0.867894351489069,10.5553898757491,1.63171705145613,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.164549020602121,0,1.17335854031855,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0.291480836629851,0,2.56306321196779,0.206386867963223,0.370389054739423,0.941842285023455,1.50363650493128,1.37266903923914,8.15896463970505,8.95689294871411,9.81219814011409,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,35.393245510356,0,1.74608627180206,8.57477431653447,13.2479754793936,19.2720914137827,15.9859947861559,20.3811547500917,20.9000551392666,19.432735697025,23.4925011368838,29.8221115063642,29.8256709085021,46.7507608726276,0,0,0,0,0,1.12609485270709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0,0.114870937911227,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p2@Cd28,p2@LOC100048845}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100048845,entrezgene:12487 | |||
|HGNC= | |||
|MCL_coexpression_id=118 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=27bp_to_ENSMUST00000153207_5end | |||
|cluster_id=chr1:60803273..60803321,+ | |||
|description=CAGE_peak_2_at_Cd28_5end,CAGE_peak_2_at_LOC100048845_5end | |||
|id=chr1:60803273..60803321,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.06e-12!32;CL:0002032!1.06e-12!32;CL:0000037!1.06e-12!32;CL:0000566!1.06e-12!32;CL:0000837!1.06e-12!32;CL:0000838!5.08e-11!12;CL:0000084!5.17e-11!11;CL:0000827!5.17e-11!11;CL:0002031!6.23e-10!25;CL:0000542!8.78e-10!13;CL:0000051!8.78e-10!13;CL:0000791!1.35e-09!9;CL:0000789!1.35e-09!9;CL:0002420!1.35e-09!9;CL:0002419!1.35e-09!9;CL:0000790!1.35e-09!9;CL:0000738!3.49e-09!17;CL:0002087!3.49e-09!17;CL:0000624!1.07e-08!8;CL:0002320!1.17e-07!46;CL:0000134!1.17e-07!46;CL:0000893!7.18e-07!6;CL:0002489!7.18e-07!6;CL:0000898!7.18e-07!6;CL:0000809!7.18e-07!6;CL:0000810!7.18e-07!6;CL:0000895!7.18e-07!6;CL:0000808!7.18e-07!6;CL:0000894!7.18e-07!6;CL:0000806!7.18e-07!6;CL:0000807!7.18e-07!6;CL:0000805!7.18e-07!6;CL:0002425!7.18e-07!6;CL:0002436!7.18e-07!6;CL:0002427!7.18e-07!6;CL:0002428!7.18e-07!6;CL:0002429!7.18e-07!6;CL:0002433!7.18e-07!6;CL:0002431!7.18e-07!6;CL:0002432!7.18e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.85e-22,11;CL:0000827,6.85e-22,11;CL:0000988,8.62e-22,32;CL:0002032,8.62e-22,32;CL:0000037,8.62e-22,32;CL:0000837,8.62e-22,32;CL:0000838,7.89e-20,12;CL:0002031,2.25e-19,25;CL:0000791,7.76e-19,9;CL:0000789,7.76e-19,9;CL:0002420,7.76e-19,9;CL:0002419,7.76e-19,9;CL:0000790,7.76e-19,9;CL:0000738,3.26e-18,17;CL:0002087,3.26e-18,17;CL:0000542,4.37e-18,13;CL:0000051,4.37e-18,13;CL:0000624,6.67e-17,8;CL:0002320,1.53e-16,46;CL:0000134,1.53e-16,46;CL:0000219,3.29e-13,54;CL:0000893,5.43e-13,6;CL:0002489,5.43e-13,6;CL:0000898,5.43e-13,6;CL:0000809,5.43e-13,6;CL:0000810,5.43e-13,6;CL:0000895,5.43e-13,6;CL:0000808,5.43e-13,6;CL:0000894,5.43e-13,6;CL:0000806,5.43e-13,6;CL:0000807,5.43e-13,6;CL:0000805,5.43e-13,6;CL:0002425,5.43e-13,6;CL:0002436,5.43e-13,6;CL:0002427,5.43e-13,6;CL:0002428,5.43e-13,6;CL:0002429,5.43e-13,6;CL:0002433,5.43e-13,6;CL:0002431,5.43e-13,6;CL:0002432,5.43e-13,6;CL:0000049,3.31e-07,19;CL:0000034,4.88e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.54e-21!45;UBERON:0003061!9.54e-21!45;UBERON:0002193!5.59e-20!48;UBERON:0004177!3.27e-16!29;UBERON:0003081!4.41e-13!88;UBERON:0002370!5.08e-13!23;UBERON:0000974!5.08e-13!23;UBERON:0004807!5.08e-13!23;UBERON:0005058!5.08e-13!23;UBERON:0003351!5.08e-13!23;UBERON:0009113!5.08e-13!23;UBERON:0003295!5.08e-13!23;UBERON:0009722!5.08e-13!23;UBERON:0005562!5.08e-13!23;UBERON:0007690!5.08e-13!23;UBERON:0006562!4.01e-12!24;UBERON:0003408!4.01e-12!24;UBERON:0001557!4.01e-12!24;UBERON:0001042!4.01e-12!24;UBERON:0008814!4.01e-12!24;UBERON:0009145!4.01e-12!24;UBERON:0000065!3.16e-11!41;UBERON:0001004!1.07e-10!42;UBERON:0002405!3.12e-10!70;UBERON:0000072!7.30e-10!27;UBERON:0002384!1.17e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.48e-35,45;UBERON:0003061,7.48e-35,45;UBERON:0002193,1.15e-34,48;UBERON:0002405,1.15e-34,48;UBERON:0004177,3.82e-29,29;UBERON:0005057,3.82e-29,29;UBERON:0002370,5.89e-29,23;UBERON:0000974,5.89e-29,23;UBERON:0004807,5.89e-29,23;UBERON:0005058,5.89e-29,23;UBERON:0003351,5.89e-29,23;UBERON:0009113,5.89e-29,23;UBERON:0003295,5.89e-29,23;UBERON:0009722,5.89e-29,23;UBERON:0005562,5.89e-29,23;UBERON:0007690,5.89e-29,23;UBERON:0006562,1.59e-27,24;UBERON:0003408,1.59e-27,24;UBERON:0001557,1.59e-27,24;UBERON:0001042,1.59e-27,24;UBERON:0008814,1.59e-27,24;UBERON:0009145,1.59e-27,24;UBERON:0000077,3.35e-25,35;UBERON:0000072,7.25e-24,27;UBERON:0000065,4.25e-17,41;UBERON:0007811,1.43e-16,36;UBERON:0001004,1.49e-16,42;UBERON:0002384,1.53e-16,46;UBERON:0003081,2.96e-15,87;UBERON:0000153,4.97e-13,43;UBERON:0000926,1.23e-09,120;UBERON:0004120,1.23e-09,120;UBERON:0006603,1.23e-09,120;UBERON:0003929,4.26e-09,55;UBERON:0001041,1.69e-08,80;UBERON:0002368,6.15e-08,60;UBERON:0005911,6.23e-08,69;UBERON:0002371,2.83e-07,16;UBERON:0002530,5.76e-07,65;UBERON:0000490,8.63e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,63.0121818394892,64.9036009119184,51.4941957908386,19.3476304094821,14.2792164601652,64.885076643927,56.9981023771863,0.666219523631325,1.01237633694913,0,5.99378114180652,5.34746291062381,3.39511721438424,1.27564935226605,8.83689465687879,4.70159620450084,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,43.5217285206807,44.3643814868052,0,0,0,0,0,0,0,0,1.7997994345628,4.94433181283487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.48439043634778,15.5362730188303,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0,0.510914110417183,2.63593273913025,1.19980546198682,2.92261522268049,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0.702213187313235,0.772043721344145,1.13665399758237,0,0,0,0,0,0,0,0,0.467061369468678,0,0.32833492815819,0.0810688095458557,0.292399974850665,0,0.402619256281115,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.493588655687202,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,3.32555742299888,0,0,0,0,0.502518772325447,0,0.390267295715598,0.472905432318573,0.44292937929755,0.318909537314974,1.14704320301017,0.518054945597687,0.867894351489069,10.5553898757491,1.63171705145613,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.164549020602121,0,1.17335854031855,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0.291480836629851,0,2.56306321196779,0.206386867963223,0.370389054739423,0.941842285023455,1.50363650493128,1.37266903923914,8.15896463970505,8.95689294871411,9.81219814011409,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,35.393245510356,0,1.74608627180206,8.57477431653447,13.2479754793936,19.2720914137827,15.9859947861559,20.3811547500917,20.9000551392666,19.432735697025,23.4925011368838,29.8221115063642,29.8256709085021,46.7507608726276,0,0,0,0,0,1.12609485270709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0,0.114870937911227,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p2@Cd28,p2@LOC100048845 | |||
}} |
Revision as of 20:06, 5 August 2015
Short description: | p2@Cd28, p2@LOC100048845 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cd28_5end, CAGE_peak_2_at_LOC100048845_5end |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | 27bp_to_ENSMUST00000153207_5end |
EntrezGene: | 100048845,12487 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data