FFCP PHASE1:Mm9::chr11:52071295..52071311,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=4|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:52071295..52071311,-|id=chr11:52071295..52071311,-|ontology_enrichment_celltype=CL:0000791!6.05e-09!9;CL:0000789!6.05e-09!9;CL:0002420!6.05e-09!9;CL:0002419!6.05e-09!9;CL:0000790!6.05e-09!9;CL:0000893!1.56e-08!6;CL:0002489!1.56e-08!6;CL:0000898!1.56e-08!6;CL:0000809!1.56e-08!6;CL:0000810!1.56e-08!6;CL:0000895!1.56e-08!6;CL:0000808!1.56e-08!6;CL:0000894!1.56e-08!6;CL:0000806!1.56e-08!6;CL:0000807!1.56e-08!6;CL:0000805!1.56e-08!6;CL:0002425!1.56e-08!6;CL:0002436!1.56e-08!6;CL:0002427!1.56e-08!6;CL:0002428!1.56e-08!6;CL:0002429!1.56e-08!6;CL:0002433!1.56e-08!6;CL:0002431!1.56e-08!6;CL:0002432!1.56e-08!6;CL:0000624!8.99e-08!8;CL:0000738!1.49e-07!17;CL:0002087!1.49e-07!17;CL:0000542!4.90e-07!13;CL:0000051!4.90e-07!13;CL:0000084!5.54e-07!11;CL:0000827!5.54e-07!11|ontology_enrichment_celltype_v019_2=CL:0000791,1.36e-08,9;CL:0000789,1.36e-08,9;CL:0002420,1.36e-08,9;CL:0002419,1.36e-08,9;CL:0000790,1.36e-08,9;CL:0000893,1.10e-07,6;CL:0002489,1.10e-07,6;CL:0000898,1.10e-07,6;CL:0000809,1.10e-07,6;CL:0000810,1.10e-07,6;CL:0000895,1.10e-07,6;CL:0000808,1.10e-07,6;CL:0000894,1.10e-07,6;CL:0000806,1.10e-07,6;CL:0000807,1.10e-07,6;CL:0000805,1.10e-07,6;CL:0002425,1.10e-07,6;CL:0002436,1.10e-07,6;CL:0002427,1.10e-07,6;CL:0002428,1.10e-07,6;CL:0002429,1.10e-07,6;CL:0002433,1.10e-07,6;CL:0002431,1.10e-07,6;CL:0002432,1.10e-07,6;CL:0000084,4.64e-07,11;CL:0000827,4.64e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.34e-20!23;UBERON:0000974!1.34e-20!23;UBERON:0004807!1.34e-20!23;UBERON:0005058!1.34e-20!23;UBERON:0003351!1.34e-20!23;UBERON:0009113!1.34e-20!23;UBERON:0003295!1.34e-20!23;UBERON:0009722!1.34e-20!23;UBERON:0005562!1.34e-20!23;UBERON:0007690!1.34e-20!23;UBERON:0006562!1.82e-19!24;UBERON:0003408!1.82e-19!24;UBERON:0001557!1.82e-19!24;UBERON:0001042!1.82e-19!24;UBERON:0008814!1.82e-19!24;UBERON:0009145!1.82e-19!24;UBERON:0004177!1.17e-16!29;UBERON:0000072!1.41e-16!27;UBERON:0000065!1.51e-13!41;UBERON:0001004!4.76e-13!42;UBERON:0002193!9.35e-12!48;UBERON:0002390!1.14e-11!45;UBERON:0003061!1.14e-11!45;UBERON:0000063!2.37e-11!35;UBERON:0002368!1.24e-07!60;UBERON:0005057!1.30e-07!51;UBERON:0003135!1.41e-07!15;UBERON:0000991!4.96e-07!18;UBERON:0005564!4.96e-07!18;UBERON:0003101!6.04e-07!16;UBERON:0000079!6.04e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.48e-47,23;UBERON:0000974,6.48e-47,23;UBERON:0004807,6.48e-47,23;UBERON:0005058,6.48e-47,23;UBERON:0003351,6.48e-47,23;UBERON:0009113,6.48e-47,23;UBERON:0003295,6.48e-47,23;UBERON:0009722,6.48e-47,23;UBERON:0005562,6.48e-47,23;UBERON:0007690,6.48e-47,23;UBERON:0006562,7.02e-45,24;UBERON:0003408,7.02e-45,24;UBERON:0001557,7.02e-45,24;UBERON:0001042,7.02e-45,24;UBERON:0008814,7.02e-45,24;UBERON:0009145,7.02e-45,24;UBERON:0000072,1.12e-39,27;UBERON:0004177,8.32e-37,29;UBERON:0005057,8.32e-37,29;UBERON:0000077,3.73e-30,35;UBERON:0007811,2.92e-29,36;UBERON:0000065,1.92e-25,41;UBERON:0001004,8.66e-25,42;UBERON:0002193,1.60e-24,48;UBERON:0002405,1.60e-24,48;UBERON:0000153,3.65e-24,43;UBERON:0002390,5.35e-23,45;UBERON:0003061,5.35e-23,45;UBERON:0003929,1.96e-18,55;UBERON:0002368,1.02e-16,60;UBERON:0002530,2.89e-15,65;UBERON:0000490,5.31e-15,66;UBERON:0005911,2.97e-14,69;UBERON:0000949,1.44e-13,72;UBERON:0001041,5.47e-12,80;UBERON:0003081,7.65e-11,87;UBERON:0004921,9.97e-08,114;UBERON:0001007,1.49e-07,116;UBERON:0001555,1.49e-07,116;UBERON:0007026,1.49e-07,116;UBERON:0004119,2.19e-07,118;UBERON:0000925,2.19e-07,118;UBERON:0006595,2.19e-07,118;UBERON:0000926,3.19e-07,120;UBERON:0004120,3.19e-07,120;UBERON:0006603,3.19e-07,120|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.84473233291,1.40438715793196,0.34243593645101,0.239316476986009,2.05440875917447,1.22388563386596,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.505445516867349,0,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0.898819408654221,0,0,0.189667900953082,0,1.1270773567308,0,0,0.140271639780637,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0,0.502518772325447,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.32977250588296,0.322928853391811,0,0.119372344003136,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,3.16011120628178,0,0.718976700153791,1.55904987573354,1.9692936523423,3.77494574084403,2.88469078847925,2.95379054349154,3.53382574818517,3.20068587950999,4.13387359061046,3.50848370663109,4.32953287381483,2.10378423926824,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.280924522409647,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr11:52071295..52071311,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:52071295..52071311,- | |||
|description=CAGE_peak_at_chr11:52071295..52071311,- | |||
|id=chr11:52071295..52071311,- | |||
|ontology_enrichment_celltype=CL:0000791!6.05e-09!9;CL:0000789!6.05e-09!9;CL:0002420!6.05e-09!9;CL:0002419!6.05e-09!9;CL:0000790!6.05e-09!9;CL:0000893!1.56e-08!6;CL:0002489!1.56e-08!6;CL:0000898!1.56e-08!6;CL:0000809!1.56e-08!6;CL:0000810!1.56e-08!6;CL:0000895!1.56e-08!6;CL:0000808!1.56e-08!6;CL:0000894!1.56e-08!6;CL:0000806!1.56e-08!6;CL:0000807!1.56e-08!6;CL:0000805!1.56e-08!6;CL:0002425!1.56e-08!6;CL:0002436!1.56e-08!6;CL:0002427!1.56e-08!6;CL:0002428!1.56e-08!6;CL:0002429!1.56e-08!6;CL:0002433!1.56e-08!6;CL:0002431!1.56e-08!6;CL:0002432!1.56e-08!6;CL:0000624!8.99e-08!8;CL:0000738!1.49e-07!17;CL:0002087!1.49e-07!17;CL:0000542!4.90e-07!13;CL:0000051!4.90e-07!13;CL:0000084!5.54e-07!11;CL:0000827!5.54e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.36e-08,9;CL:0000789,1.36e-08,9;CL:0002420,1.36e-08,9;CL:0002419,1.36e-08,9;CL:0000790,1.36e-08,9;CL:0000893,1.10e-07,6;CL:0002489,1.10e-07,6;CL:0000898,1.10e-07,6;CL:0000809,1.10e-07,6;CL:0000810,1.10e-07,6;CL:0000895,1.10e-07,6;CL:0000808,1.10e-07,6;CL:0000894,1.10e-07,6;CL:0000806,1.10e-07,6;CL:0000807,1.10e-07,6;CL:0000805,1.10e-07,6;CL:0002425,1.10e-07,6;CL:0002436,1.10e-07,6;CL:0002427,1.10e-07,6;CL:0002428,1.10e-07,6;CL:0002429,1.10e-07,6;CL:0002433,1.10e-07,6;CL:0002431,1.10e-07,6;CL:0002432,1.10e-07,6;CL:0000084,4.64e-07,11;CL:0000827,4.64e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.34e-20!23;UBERON:0000974!1.34e-20!23;UBERON:0004807!1.34e-20!23;UBERON:0005058!1.34e-20!23;UBERON:0003351!1.34e-20!23;UBERON:0009113!1.34e-20!23;UBERON:0003295!1.34e-20!23;UBERON:0009722!1.34e-20!23;UBERON:0005562!1.34e-20!23;UBERON:0007690!1.34e-20!23;UBERON:0006562!1.82e-19!24;UBERON:0003408!1.82e-19!24;UBERON:0001557!1.82e-19!24;UBERON:0001042!1.82e-19!24;UBERON:0008814!1.82e-19!24;UBERON:0009145!1.82e-19!24;UBERON:0004177!1.17e-16!29;UBERON:0000072!1.41e-16!27;UBERON:0000065!1.51e-13!41;UBERON:0001004!4.76e-13!42;UBERON:0002193!9.35e-12!48;UBERON:0002390!1.14e-11!45;UBERON:0003061!1.14e-11!45;UBERON:0000063!2.37e-11!35;UBERON:0002368!1.24e-07!60;UBERON:0005057!1.30e-07!51;UBERON:0003135!1.41e-07!15;UBERON:0000991!4.96e-07!18;UBERON:0005564!4.96e-07!18;UBERON:0003101!6.04e-07!16;UBERON:0000079!6.04e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.48e-47,23;UBERON:0000974,6.48e-47,23;UBERON:0004807,6.48e-47,23;UBERON:0005058,6.48e-47,23;UBERON:0003351,6.48e-47,23;UBERON:0009113,6.48e-47,23;UBERON:0003295,6.48e-47,23;UBERON:0009722,6.48e-47,23;UBERON:0005562,6.48e-47,23;UBERON:0007690,6.48e-47,23;UBERON:0006562,7.02e-45,24;UBERON:0003408,7.02e-45,24;UBERON:0001557,7.02e-45,24;UBERON:0001042,7.02e-45,24;UBERON:0008814,7.02e-45,24;UBERON:0009145,7.02e-45,24;UBERON:0000072,1.12e-39,27;UBERON:0004177,8.32e-37,29;UBERON:0005057,8.32e-37,29;UBERON:0000077,3.73e-30,35;UBERON:0007811,2.92e-29,36;UBERON:0000065,1.92e-25,41;UBERON:0001004,8.66e-25,42;UBERON:0002193,1.60e-24,48;UBERON:0002405,1.60e-24,48;UBERON:0000153,3.65e-24,43;UBERON:0002390,5.35e-23,45;UBERON:0003061,5.35e-23,45;UBERON:0003929,1.96e-18,55;UBERON:0002368,1.02e-16,60;UBERON:0002530,2.89e-15,65;UBERON:0000490,5.31e-15,66;UBERON:0005911,2.97e-14,69;UBERON:0000949,1.44e-13,72;UBERON:0001041,5.47e-12,80;UBERON:0003081,7.65e-11,87;UBERON:0004921,9.97e-08,114;UBERON:0001007,1.49e-07,116;UBERON:0001555,1.49e-07,116;UBERON:0007026,1.49e-07,116;UBERON:0004119,2.19e-07,118;UBERON:0000925,2.19e-07,118;UBERON:0006595,2.19e-07,118;UBERON:0000926,3.19e-07,120;UBERON:0004120,3.19e-07,120;UBERON:0006603,3.19e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.84473233291,1.40438715793196,0.34243593645101,0.239316476986009,2.05440875917447,1.22388563386596,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.505445516867349,0,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0.898819408654221,0,0,0.189667900953082,0,1.1270773567308,0,0,0.140271639780637,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0,0.502518772325447,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.32977250588296,0.322928853391811,0,0.119372344003136,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,3.16011120628178,0,0.718976700153791,1.55904987573354,1.9692936523423,3.77494574084403,2.88469078847925,2.95379054349154,3.53382574818517,3.20068587950999,4.13387359061046,3.50848370663109,4.32953287381483,2.10378423926824,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.280924522409647,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr11:52071295..52071311,- | |||
}} |
Latest revision as of 01:10, 6 August 2015
Short description: | p@chr11:52071295..52071311, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:52071295..52071311, - |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.36e-08 | 9 |
alpha-beta T cell | 1.36e-08 | 9 |
immature T cell | 1.36e-08 | 9 |
mature T cell | 1.36e-08 | 9 |
immature alpha-beta T cell | 1.36e-08 | 9 |
thymocyte | 1.10e-07 | 6 |
double negative thymocyte | 1.10e-07 | 6 |
naive T cell | 1.10e-07 | 6 |
double-positive, alpha-beta thymocyte | 1.10e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 1.10e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.10e-07 | 6 |
DN4 thymocyte | 1.10e-07 | 6 |
DN1 thymic pro-T cell | 1.10e-07 | 6 |
DN2 thymocyte | 1.10e-07 | 6 |
DN3 thymocyte | 1.10e-07 | 6 |
immature single positive thymocyte | 1.10e-07 | 6 |
early T lineage precursor | 1.10e-07 | 6 |
mature CD4 single-positive thymocyte | 1.10e-07 | 6 |
resting double-positive thymocyte | 1.10e-07 | 6 |
double-positive blast | 1.10e-07 | 6 |
CD69-positive double-positive thymocyte | 1.10e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.10e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.10e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.10e-07 | 6 |
T cell | 4.64e-07 | 11 |
pro-T cell | 4.64e-07 | 11 |