FFCP PHASE1:Mm9::chr6:93862948..93862971,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1454|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:93862948..93862971,-|id=chr6:93862948..93862971,-|ontology_enrichment_celltype=CL:0000540!1.22e-14!33;CL:0000047!1.22e-14!33;CL:0000031!1.22e-14!33;CL:0000404!1.22e-14!33;CL:0000221!1.70e-11!44;CL:0000133!1.70e-11!44;CL:0000393!2.93e-11!39;CL:0000211!2.93e-11!39;CL:0002319!6.63e-11!43;CL:0000117!8.03e-10!23;CL:0000337!8.03e-10!23;CL:0000055!2.89e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,4.48e-11,33;CL:0000047,4.48e-11,33;CL:0000031,4.48e-11,33;CL:0000404,4.48e-11,33;CL:0000117,8.71e-10,23;CL:0000337,8.71e-10,23;CL:0000120,3.46e-09,3;CL:0002613,4.44e-09,3;CL:0000393,5.91e-09,39;CL:0000211,5.91e-09,39;CL:0000221,6.06e-09,44;CL:0000133,6.06e-09,44;CL:0002614,6.56e-08,3;CL:0002319,7.11e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.13e-25!102;UBERON:0000924!2.13e-25!102;UBERON:0006601!2.13e-25!102;UBERON:0002346!8.42e-25!71;UBERON:0003075!8.42e-25!71;UBERON:0007284!8.42e-25!71;UBERON:0001017!2.04e-23!73;UBERON:0005743!2.04e-23!73;UBERON:0000033!3.30e-23!63;UBERON:0000073!4.18e-22!75;UBERON:0001016!4.18e-22!75;UBERON:0003056!1.78e-18!49;UBERON:0001049!3.90e-17!52;UBERON:0005068!3.90e-17!52;UBERON:0006241!3.90e-17!52;UBERON:0007135!3.90e-17!52;UBERON:0000955!2.62e-16!50;UBERON:0006238!2.62e-16!50;UBERON:0002616!1.59e-15!49;UBERON:0003080!2.43e-12!40;UBERON:0002780!9.94e-12!39;UBERON:0001890!9.94e-12!39;UBERON:0006240!9.94e-12!39;UBERON:0007811!1.50e-11!86;UBERON:0000153!1.83e-10!94;UBERON:0002020!2.76e-10!34;UBERON:0002791!4.06e-09!29;UBERON:0003528!4.06e-09!29;UBERON:0001893!4.06e-09!29;UBERON:0000020!1.53e-08!12;UBERON:0001032!1.53e-08!12;UBERON:0004456!1.53e-08!12;UBERON:0000970!8.81e-08!9;UBERON:0000019!8.81e-08!9;UBERON:0000047!8.81e-08!9;UBERON:0004088!8.81e-08!9;UBERON:0002104!8.81e-08!9;UBERON:0001456!8.81e-08!9;UBERON:0003072!8.81e-08!9;UBERON:0003071!8.81e-08!9;UBERON:0004128!8.81e-08!9;UBERON:0002420!5.19e-07!8;UBERON:0007245!5.19e-07!8;UBERON:0010009!5.19e-07!8;UBERON:0010011!5.19e-07!8;UBERON:0000454!5.19e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.67e-25,95;UBERON:0000924,2.67e-25,95;UBERON:0006601,2.67e-25,95;UBERON:0002346,4.96e-21,64;UBERON:0003075,4.96e-21,64;UBERON:0007284,4.96e-21,64;UBERON:0010371,1.92e-19,73;UBERON:0000970,1.52e-18,9;UBERON:0000019,1.52e-18,9;UBERON:0000047,1.52e-18,9;UBERON:0010312,1.52e-18,9;UBERON:0004088,1.52e-18,9;UBERON:0002104,1.52e-18,9;UBERON:0001456,1.52e-18,9;UBERON:0003072,1.52e-18,9;UBERON:0004128,1.52e-18,9;UBERON:0003071,1.52e-18,9;UBERON:0000020,5.83e-17,12;UBERON:0001032,5.83e-17,12;UBERON:0004456,5.83e-17,12;UBERON:0001017,2.92e-16,73;UBERON:0001016,1.09e-15,75;UBERON:0000033,1.57e-15,13;UBERON:0005085,1.57e-15,13;UBERON:0003056,2.60e-15,49;UBERON:0002420,3.44e-15,8;UBERON:0007245,3.44e-15,8;UBERON:0010009,3.44e-15,8;UBERON:0010011,3.44e-15,8;UBERON:0000454,3.44e-15,8;UBERON:0001444,6.26e-15,11;UBERON:0010314,2.83e-14,92;UBERON:0000955,4.83e-11,47;UBERON:0006238,4.83e-11,47;UBERON:0001049,5.20e-11,52;UBERON:0005068,5.20e-11,52;UBERON:0006241,5.20e-11,52;UBERON:0007135,5.20e-11,52;UBERON:0002950,5.30e-10,4;UBERON:0001891,5.30e-10,4;UBERON:0009616,5.30e-10,4;UBERON:0010286,5.30e-10,4;UBERON:0002616,1.08e-09,46;UBERON:0000073,5.67e-09,54;UBERON:0000369,5.71e-09,5;UBERON:0002435,5.71e-09,5;UBERON:0000204,5.71e-09,5;UBERON:0010082,5.71e-09,5;UBERON:0000013,7.28e-09,3;UBERON:0003076,6.51e-08,12;UBERON:0003057,6.51e-08,12;UBERON:0002038,6.56e-08,3;UBERON:0009663,6.56e-08,3;UBERON:0009661,6.56e-08,3;UBERON:0000125,6.56e-08,3;UBERON:0002308,6.56e-08,3;UBERON:0004733,7.71e-08,6;UBERON:0004732,7.71e-08,6;UBERON:0002028,7.71e-08,6;UBERON:0007277,7.71e-08,6|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.659058548203415,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,1.61853168687678,2.11596391708813,3.1691570175309,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.420649922702764,0.571301968807607,0.662605622854841,0.244981598429908,0.191690942036473,0.919218786610021,0,0.766124028511126,0.921639199537461,1.71452174049252,2.37867873366265,2.08365348222704,1.11673199600552,1.12552522006336,1.5279824777681,0,0.427115042397309,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0.520455980298408,0.304465478312141,0.230615497256059,0.753613202763113,0.117588707135705,0,0,0,0,0,0,0,0,3.51336956413857,2.51336048176146,0,0,0,0,1.19832511523858,1.37250180845588,0.879580464790051,1.39059456153821,1.02286182932132,1.0389402227978,0.811206315338788,0,0.248813941220186,0.252722758433675,0.420883711772948,1.82168620147785,1.14951052216736,1.44049703844279,2.56198190320716,1.7009124787832,2.43416068541215,2.62364828767241,1.81092359517311,0.646703978798527,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0.268412837520744,0.420579897128254,0.92614151141356,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0.444756087689741,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.571242563048644,0,0.407302655690628,0.387904974335251,0.350679099451593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,2.0871576698413,1.40654023910644,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.955875191810208,0.668396022247182,0.566153061577665,1.61924280669958,2.04579100537918,1.97643888973262,3.21321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.258717367565509,0.643011105094777,0,0.356737635204141,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0.119372344003136,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.216010681643603,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.171853182343688,0.685082519770642,1.5107877947794,0,0,0,0.51776031175182,0.830298780673413,0.399024873401031,0.682934423016537,0.243106717068294,0.628839487883947,0.551530525350042,0.44449345560323,0.206035057238894,0.64183841918363,0.252697211763798,0,0.754505365544305,0.280924522409647,0.384150914429216,0.459483751644906,0.952587382566147,0.579421629724277,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.376437521661322,0.507687647350059,0.182927972872773,0.526139422875686,0.814824683075171,0,0.474540072496697,0.689531376628944,0,0.309873682371932,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p@chr6:93862948..93862971,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1454 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:93862948..93862971,- | |||
|description=CAGE_peak_at_chr6:93862948..93862971,- | |||
|id=chr6:93862948..93862971,- | |||
|ontology_enrichment_celltype=CL:0000540!1.22e-14!33;CL:0000047!1.22e-14!33;CL:0000031!1.22e-14!33;CL:0000404!1.22e-14!33;CL:0000221!1.70e-11!44;CL:0000133!1.70e-11!44;CL:0000393!2.93e-11!39;CL:0000211!2.93e-11!39;CL:0002319!6.63e-11!43;CL:0000117!8.03e-10!23;CL:0000337!8.03e-10!23;CL:0000055!2.89e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.48e-11,33;CL:0000047,4.48e-11,33;CL:0000031,4.48e-11,33;CL:0000404,4.48e-11,33;CL:0000117,8.71e-10,23;CL:0000337,8.71e-10,23;CL:0000120,3.46e-09,3;CL:0002613,4.44e-09,3;CL:0000393,5.91e-09,39;CL:0000211,5.91e-09,39;CL:0000221,6.06e-09,44;CL:0000133,6.06e-09,44;CL:0002614,6.56e-08,3;CL:0002319,7.11e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.13e-25!102;UBERON:0000924!2.13e-25!102;UBERON:0006601!2.13e-25!102;UBERON:0002346!8.42e-25!71;UBERON:0003075!8.42e-25!71;UBERON:0007284!8.42e-25!71;UBERON:0001017!2.04e-23!73;UBERON:0005743!2.04e-23!73;UBERON:0000033!3.30e-23!63;UBERON:0000073!4.18e-22!75;UBERON:0001016!4.18e-22!75;UBERON:0003056!1.78e-18!49;UBERON:0001049!3.90e-17!52;UBERON:0005068!3.90e-17!52;UBERON:0006241!3.90e-17!52;UBERON:0007135!3.90e-17!52;UBERON:0000955!2.62e-16!50;UBERON:0006238!2.62e-16!50;UBERON:0002616!1.59e-15!49;UBERON:0003080!2.43e-12!40;UBERON:0002780!9.94e-12!39;UBERON:0001890!9.94e-12!39;UBERON:0006240!9.94e-12!39;UBERON:0007811!1.50e-11!86;UBERON:0000153!1.83e-10!94;UBERON:0002020!2.76e-10!34;UBERON:0002791!4.06e-09!29;UBERON:0003528!4.06e-09!29;UBERON:0001893!4.06e-09!29;UBERON:0000020!1.53e-08!12;UBERON:0001032!1.53e-08!12;UBERON:0004456!1.53e-08!12;UBERON:0000970!8.81e-08!9;UBERON:0000019!8.81e-08!9;UBERON:0000047!8.81e-08!9;UBERON:0004088!8.81e-08!9;UBERON:0002104!8.81e-08!9;UBERON:0001456!8.81e-08!9;UBERON:0003072!8.81e-08!9;UBERON:0003071!8.81e-08!9;UBERON:0004128!8.81e-08!9;UBERON:0002420!5.19e-07!8;UBERON:0007245!5.19e-07!8;UBERON:0010009!5.19e-07!8;UBERON:0010011!5.19e-07!8;UBERON:0000454!5.19e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.67e-25,95;UBERON:0000924,2.67e-25,95;UBERON:0006601,2.67e-25,95;UBERON:0002346,4.96e-21,64;UBERON:0003075,4.96e-21,64;UBERON:0007284,4.96e-21,64;UBERON:0010371,1.92e-19,73;UBERON:0000970,1.52e-18,9;UBERON:0000019,1.52e-18,9;UBERON:0000047,1.52e-18,9;UBERON:0010312,1.52e-18,9;UBERON:0004088,1.52e-18,9;UBERON:0002104,1.52e-18,9;UBERON:0001456,1.52e-18,9;UBERON:0003072,1.52e-18,9;UBERON:0004128,1.52e-18,9;UBERON:0003071,1.52e-18,9;UBERON:0000020,5.83e-17,12;UBERON:0001032,5.83e-17,12;UBERON:0004456,5.83e-17,12;UBERON:0001017,2.92e-16,73;UBERON:0001016,1.09e-15,75;UBERON:0000033,1.57e-15,13;UBERON:0005085,1.57e-15,13;UBERON:0003056,2.60e-15,49;UBERON:0002420,3.44e-15,8;UBERON:0007245,3.44e-15,8;UBERON:0010009,3.44e-15,8;UBERON:0010011,3.44e-15,8;UBERON:0000454,3.44e-15,8;UBERON:0001444,6.26e-15,11;UBERON:0010314,2.83e-14,92;UBERON:0000955,4.83e-11,47;UBERON:0006238,4.83e-11,47;UBERON:0001049,5.20e-11,52;UBERON:0005068,5.20e-11,52;UBERON:0006241,5.20e-11,52;UBERON:0007135,5.20e-11,52;UBERON:0002950,5.30e-10,4;UBERON:0001891,5.30e-10,4;UBERON:0009616,5.30e-10,4;UBERON:0010286,5.30e-10,4;UBERON:0002616,1.08e-09,46;UBERON:0000073,5.67e-09,54;UBERON:0000369,5.71e-09,5;UBERON:0002435,5.71e-09,5;UBERON:0000204,5.71e-09,5;UBERON:0010082,5.71e-09,5;UBERON:0000013,7.28e-09,3;UBERON:0003076,6.51e-08,12;UBERON:0003057,6.51e-08,12;UBERON:0002038,6.56e-08,3;UBERON:0009663,6.56e-08,3;UBERON:0009661,6.56e-08,3;UBERON:0000125,6.56e-08,3;UBERON:0002308,6.56e-08,3;UBERON:0004733,7.71e-08,6;UBERON:0004732,7.71e-08,6;UBERON:0002028,7.71e-08,6;UBERON:0007277,7.71e-08,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.659058548203415,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,1.61853168687678,2.11596391708813,3.1691570175309,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.420649922702764,0.571301968807607,0.662605622854841,0.244981598429908,0.191690942036473,0.919218786610021,0,0.766124028511126,0.921639199537461,1.71452174049252,2.37867873366265,2.08365348222704,1.11673199600552,1.12552522006336,1.5279824777681,0,0.427115042397309,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0.520455980298408,0.304465478312141,0.230615497256059,0.753613202763113,0.117588707135705,0,0,0,0,0,0,0,0,3.51336956413857,2.51336048176146,0,0,0,0,1.19832511523858,1.37250180845588,0.879580464790051,1.39059456153821,1.02286182932132,1.0389402227978,0.811206315338788,0,0.248813941220186,0.252722758433675,0.420883711772948,1.82168620147785,1.14951052216736,1.44049703844279,2.56198190320716,1.7009124787832,2.43416068541215,2.62364828767241,1.81092359517311,0.646703978798527,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0.268412837520744,0.420579897128254,0.92614151141356,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0.444756087689741,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.571242563048644,0,0.407302655690628,0.387904974335251,0.350679099451593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,2.0871576698413,1.40654023910644,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.955875191810208,0.668396022247182,0.566153061577665,1.61924280669958,2.04579100537918,1.97643888973262,3.21321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.258717367565509,0.643011105094777,0,0.356737635204141,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0.119372344003136,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.216010681643603,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.171853182343688,0.685082519770642,1.5107877947794,0,0,0,0.51776031175182,0.830298780673413,0.399024873401031,0.682934423016537,0.243106717068294,0.628839487883947,0.551530525350042,0.44449345560323,0.206035057238894,0.64183841918363,0.252697211763798,0,0.754505365544305,0.280924522409647,0.384150914429216,0.459483751644906,0.952587382566147,0.579421629724277,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.376437521661322,0.507687647350059,0.182927972872773,0.526139422875686,0.814824683075171,0,0.474540072496697,0.689531376628944,0,0.309873682371932,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr6:93862948..93862971,- | |||
}} |
Latest revision as of 08:27, 6 August 2015
Short description: | p@chr6:93862948..93862971, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:93862948..93862971, - |
Coexpression cluster: | MCL_coexpression_mm9:1454 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.48e-11 | 33 |
neuronal stem cell | 4.48e-11 | 33 |
neuroblast | 4.48e-11 | 33 |
electrically signaling cell | 4.48e-11 | 33 |
CNS neuron (sensu Vertebrata) | 8.71e-10 | 23 |
neuroblast (sensu Vertebrata) | 8.71e-10 | 23 |
granule cell | 3.46e-09 | 3 |
striatum neuron | 4.44e-09 | 3 |
electrically responsive cell | 5.91e-09 | 39 |
electrically active cell | 5.91e-09 | 39 |
ectodermal cell | 6.06e-09 | 44 |
neurectodermal cell | 6.06e-09 | 44 |
neuron of the substantia nigra | 6.56e-08 | 3 |
neural cell | 7.11e-08 | 43 |