FF:10086-102B5: Difference between revisions

Revision as of 14:44, 15 May 2017

Name:	liver, fetal, pool1
Species:	Human (Homo sapiens)
Library ID:	CNhs11798
Sample type:	tissues
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9, 10
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	liver
dev stage	22-40 weeks fetus
sex	mixed
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	Clontech
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	8101369A-6
catalog number	Cat: 636643 Lot: 8101369A-6
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004877

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11798		CAGE		DRX008675		DRR009547

Accession ID Hg19

Library id		BAM		CTSS
CNhs11798		DRZ000972		DRZ002357

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.178
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.00625
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	1.346
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.0826
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	1.418
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0587
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.208
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.365
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0.562
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.42
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	1.154
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.983
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.194
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.361
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.059
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.204
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.366
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0.366
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0.562
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11798

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.647
MA0003.1	MA0003.1	0.0476
MA0004.1	MA0004.1	0.439
MA0006.1	MA0006.1	0.118
MA0007.1	MA0007.1	0.0092
MA0009.1	MA0009.1	0.36
MA0014.1	MA0014.1	0.336
MA0017.1	MA0017.1	2.07006e-20
MA0018.2	MA0018.2	0.506
MA0019.1	MA0019.1	0.468
MA0024.1	MA0024.1	0.819
MA0025.1	MA0025.1	0.314
MA0027.1	MA0027.1	0.988
MA0028.1	MA0028.1	2.27048e-5
MA0029.1	MA0029.1	0.0847
MA0030.1	MA0030.1	0.00835
MA0031.1	MA0031.1	0.0315
MA0035.2	MA0035.2	7.30161e-15
MA0038.1	MA0038.1	0.464
MA0039.2	MA0039.2	0.178
MA0040.1	MA0040.1	0.749
MA0041.1	MA0041.1	0.187
MA0042.1	MA0042.1	0.662
MA0043.1	MA0043.1	0.48
MA0046.1	MA0046.1	1.10993e-86
MA0047.2	MA0047.2	5.65882e-5
MA0048.1	MA0048.1	0.343
MA0050.1	MA0050.1	0.157
MA0051.1	MA0051.1	0.0355
MA0052.1	MA0052.1	0.0763
MA0055.1	MA0055.1	0.958
MA0057.1	MA0057.1	0.449
MA0058.1	MA0058.1	0.442
MA0059.1	MA0059.1	0.348
MA0060.1	MA0060.1	0.075
MA0061.1	MA0061.1	0.26
MA0062.2	MA0062.2	3.35318e-8
MA0065.2	MA0065.2	2.67848e-9
MA0066.1	MA0066.1	0.0402
MA0067.1	MA0067.1	0.14
MA0068.1	MA0068.1	0.299
MA0069.1	MA0069.1	0.469
MA0070.1	MA0070.1	0.25
MA0071.1	MA0071.1	0.0439
MA0072.1	MA0072.1	0.0465
MA0073.1	MA0073.1	0.913
MA0074.1	MA0074.1	0.625
MA0076.1	MA0076.1	2.24788e-6
MA0077.1	MA0077.1	0.713
MA0078.1	MA0078.1	0.82
MA0079.2	MA0079.2	0.455
MA0080.2	MA0080.2	0.0158
MA0081.1	MA0081.1	0.274
MA0083.1	MA0083.1	0.876
MA0084.1	MA0084.1	0.772
MA0087.1	MA0087.1	0.998
MA0088.1	MA0088.1	0.241
MA0090.1	MA0090.1	0.549
MA0091.1	MA0091.1	0.214
MA0092.1	MA0092.1	0.348
MA0093.1	MA0093.1	0.412
MA0099.2	MA0099.2	1.08741e-4
MA0100.1	MA0100.1	0.917
MA0101.1	MA0101.1	0.154
MA0102.2	MA0102.2	0.78
MA0103.1	MA0103.1	0.0437
MA0104.2	MA0104.2	0.823
MA0105.1	MA0105.1	0.651
MA0106.1	MA0106.1	0.722
MA0107.1	MA0107.1	0.0696
MA0108.2	MA0108.2	2.5352e-20
MA0111.1	MA0111.1	0.871
MA0112.2	MA0112.2	6.10911e-4
MA0113.1	MA0113.1	0.101
MA0114.1	MA0114.1	5.11278e-20
MA0115.1	MA0115.1	7.13072e-6
MA0116.1	MA0116.1	0.0359
MA0117.1	MA0117.1	0.601
MA0119.1	MA0119.1	0.58
MA0122.1	MA0122.1	0.502
MA0124.1	MA0124.1	0.946
MA0125.1	MA0125.1	0.208
MA0131.1	MA0131.1	0.469
MA0135.1	MA0135.1	0.217
MA0136.1	MA0136.1	4.38163e-4
MA0137.2	MA0137.2	0.121
MA0138.2	MA0138.2	0.0838
MA0139.1	MA0139.1	0.779
MA0140.1	MA0140.1	1.33827e-18
MA0141.1	MA0141.1	7.25808e-4
MA0142.1	MA0142.1	0.126
MA0143.1	MA0143.1	0.812
MA0144.1	MA0144.1	0.0157
MA0145.1	MA0145.1	0.196
MA0146.1	MA0146.1	0.0143
MA0147.1	MA0147.1	0.981
MA0148.1	MA0148.1	0.00185
MA0149.1	MA0149.1	0.949
MA0150.1	MA0150.1	0.951
MA0152.1	MA0152.1	0.0177
MA0153.1	MA0153.1	1.0556e-41
MA0154.1	MA0154.1	0.1
MA0155.1	MA0155.1	0.0391
MA0156.1	MA0156.1	4.46873e-4
MA0157.1	MA0157.1	0.131
MA0159.1	MA0159.1	0.013
MA0160.1	MA0160.1	0.00818
MA0162.1	MA0162.1	0.258
MA0163.1	MA0163.1	0.293
MA0164.1	MA0164.1	0.488
MA0258.1	MA0258.1	0.00109
MA0259.1	MA0259.1	0.486

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11798

Novel motif	Logo	P-value
1	1	0.464
10	10	0.879
100	100	0.253
101	101	0.372
102	102	0.209
103	103	0.185
104	104	0.153
105	105	0.303
106	106	0.00347
107	107	0.0209
108	108	0.606
109	109	0.185
11	11	0.113
110	110	0.686
111	111	0.962
112	112	0.174
113	113	5.36455e-4
114	114	0.289
115	115	0.628
116	116	0.493
117	117	0.734
118	118	0.401
119	119	0.0983
12	12	0.789
120	120	0.499
121	121	0.581
122	122	0.959
123	123	0.312
124	124	0.468
125	125	0.497
126	126	0.199
127	127	0.822
128	128	0.101
129	129	0.559
13	13	0.193
130	130	0.0344
131	131	0.42
132	132	0.265
133	133	0.506
134	134	0.515
135	135	0.892
136	136	0.49
137	137	0.336
138	138	0.995
139	139	0.24
14	14	0.849
140	140	0.704
141	141	0.0406
142	142	0.231
143	143	0.0633
144	144	0.459
145	145	0.189
146	146	0.339
147	147	0.413
148	148	0.363
149	149	0.238
15	15	0.632
150	150	0.748
151	151	0.306
152	152	0.0478
153	153	0.685
154	154	0.364
155	155	0.0473
156	156	0.9
157	157	0.695
158	158	0.729
159	159	0.969
16	16	0.272
160	160	0.0134
161	161	0.971
162	162	0.197
163	163	0.437
164	164	0.654
165	165	0.0628
166	166	0.705
167	167	0.757
168	168	0.388
169	169	0.0199
17	17	0.355
18	18	0.93
19	19	0.0126
2	2	0.239
20	20	0.688
21	21	0.255
22	22	0.0596
23	23	0.114
24	24	0.793
25	25	0.621
26	26	0.307
27	27	0.64
28	28	0.663
29	29	0.712
3	3	0.576
30	30	0.332
31	31	0.303
32	32	0.0184
33	33	0.56
34	34	0.222
35	35	0.891
36	36	0.359
37	37	0.965
38	38	0.309
39	39	0.278
4	4	0.522
40	40	0.0064
41	41	0.415
42	42	0.949
43	43	0.152
44	44	6.86838e-4
45	45	0.0976
46	46	0.183
47	47	0.544
48	48	0.283
49	49	0.134
5	5	0.575
50	50	0.504
51	51	0.635
52	52	0.0436
53	53	0.794
54	54	0.402
55	55	0.519
56	56	0.462
57	57	0.81
58	58	0.43
59	59	0.0463
6	6	0.663
60	60	0.0203
61	61	0.631
62	62	0.315
63	63	0.479
64	64	0.27
65	65	0.102
66	66	0.605
67	67	0.222
68	68	0.767
69	69	0.155
7	7	0.0278
70	70	0.0553
71	71	0.291
72	72	0.668
73	73	0.0838
74	74	0.163
75	75	0.486
76	76	0.549
77	77	0.0496
78	78	0.078
79	79	0.957
8	8	0.224
80	80	0.784
81	81	0.978
82	82	0.657
83	83	0.759
84	84	0.276
85	85	0.232
86	86	0.848
87	87	0.656
88	88	0.584
89	89	0.287
9	9	0.479
90	90	0.745
91	91	0.278
92	92	0.214
93	93	0.528
94	94	0.302
95	95	0.557
96	96	0.149
97	97	0.475
98	98	0.736
99	99	0.139

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11798

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010086 human liver - fetal sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002107 (liver)
0002100 (trunk)
0000479 (tissue)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0005177 (trunk region element)
0002365 (exocrine gland)
0005172 (abdomen element)
0006925 (digestive gland)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0002330 (exocrine system)
0000916 (abdomen)
0002423 (hepatobiliary system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010086 (human liver - fetal sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0001041 (foregut)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0003104 (mesenchyme)
UBERON:0004161 (septum transversum)
UBERON:0009497 (epithelium of foregut-midgut junction)
UBERON:0010316 (germ layer / neural crest)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!3.58!3780.42!SEBOX;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!2.73!537.98!SEBOX;;chr17:26697257..26697268,-!p3@SEBOX,p3@VTN!2.35!221.29!SEBOX;;chr1:27240455..27240474,-!p1@NR0B2!2.14!137.81!NR0B2;;chr19:12998003..12998021,-!p1@KLF1!2.08!120.58!KLF1;;chr19:50432453..50432468,+!p1@ATF5!2.03!5496.39!ATF5;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.03!107.33!PEG3;;chrX:131547625..131547644,-!p4@MBNL3!1.98!95.40!MBNL3;;chrX:48644984..48645005,+!p1@GATA1!1.95!88.78!GATA1;;chr19:4153613..4153652,+!p1@CREB3L3!1.95!87.45!CREB3L3;;chr6:1312325..1312340,+!p1@FOXQ1!1.90!125.88!FOXQ1;;chr19:33793430..33793447,-!p1@CEBPA!1.89!306.09!CEBPA;;chr1:214161272..214161322,+!p1@PROX1!1.86!98.06!PROX1;;chr7:73038839..73038862,-!p1@MLXIPL!1.86!71.55!MLXIPL;;chrX:131547596..131547609,-!p10@MBNL3!1.82!64.93!MBNL3;;chr19:46367576..46367592,+!p1@FOXA3!1.76!56.98!FOXA3;;chr12:54689532..54689551,-!p4@NFE2!1.70!49.03!NFE2;;chr12:100867627..100867652,+!p1@NR1H4!1.65!43.73!NR1H4;;chr12:100867653..100867677,+!p2@NR1H4!1.61!39.75!NR1H4;;chr19:46800289..46800327,+!p2@HIF3A!1.60!38.43!HIF3A;;chr1:199996733..199996781,+!p1@NR5A2!1.60!38.43!NR5A2;;chr12:54694758..54694805,-!p1@NFE2!1.56!42.40!NFE2;;chr12:54694653..54694672,-!p2@NFE2!1.55!34.45!NFE2;;chr9:135854091..135854159,+!p1@GFI1B!1.50!30.48!GFI1B;;chr1:47695003..47695042,-!p2@TAL1!1.48!29.15!TAL1;;chr12:54694807..54694832,-!p3@NFE2!1.48!29.15!NFE2;;chr20:62680984..62680999,-!p1@SOX18!1.47!37.10!SOX18;;chr3:126076242..126076257,-!p1@KLF15!1.46!34.45!KLF15;;chr4:174451370..174451387,-!p1@HAND2!1.42!25.18!HAND2;;chr19:54041669..54041697,+!p2@ZNF331!1.42!25.18!ZNF331;;chr20:43029862..43029900,+!p1@HNF4A!1.42!25.18!HNF4A;;chr16:85932760..85932775,+!p1@IRF8!1.42!25.18!IRF8;;chr20:50159198..50159299,-!p1@NFATC2!1.41!35.78!NFATC2;;chr15:53082521..53082549,-!p1@ONECUT1!1.40!23.85!ONECUT1;;chr3:126073018..126073036,-!p3@KLF15!1.40!23.85!KLF15;;chr11:47400078..47400106,-!p1@SPI1!1.40!23.85!SPI1;;chr1:201979743..201979762,+!p1@ELF3!1.37!22.53!ELF3;;chr10:94449703..94449718,+!p1@HHEX!1.36!82.15!HHEX;;chr11:16133391..16133439,-!p6@SOX6!1.35!21.20!SOX6;;chr11:47400062..47400077,-!p2@SPI1!1.35!21.20!SPI1;;chr10:51572339..51572376,+!p4@NCOA4!1.29!41.08!NCOA4;;chr19:13213511..13213545,-!p2@LYL1!1.29!19.88!LYL1;;chrY:21906594..21906622,-!p1@KDM5D!1.29!18.55!KDM5D;;chr1:201979703..201979721,+!p2@ELF3!1.29!18.55!ELF3;;chr1:47697881..47697910,-!p4@TAL1!1.26!17.23!TAL1;;chr12:54689552..54689574,-!p6@NFE2!1.26!17.23!NFE2;;chr15:61521495..61521506,-!p5@RORA!1.26!17.23!RORA;;chr17:26694979..26695007,-!p4@SEBOX!1.23!15.90!SEBOX;;chr1:199996702..199996732,+!p5@NR5A2!1.23!15.90!NR5A2;;chr16:79634624..79634642,-!p1@MAF!1.21!59.63!MAF;;chr8:71316403..71316427,-!p6@NCOA2!1.19!17.23!NCOA2;;chr19:54058073..54058088,+!p1@ZNF331!1.19!14.58!ZNF331;;chr1:151804244..151804310,-!p1@RORC!1.19!14.58!RORC;;chr14:38064429..38064486,-!p1@FOXA1!1.19!14.58!FOXA1;;chr2:68592406..68592424,+!p1@PLEK!1.19!14.58!PLEK;;chr3:126076264..126076305,-!p2@KLF15!1.18!19.88!KLF15;;chr16:79634595..79634620,-!p2@MAF!1.17!25.18!MAF;;chr11:113930425..113930471,+!p1@ZBTB16!1.17!19.88!ZBTB16;;chr1:23857325..23857416,-!p2@E2F2!1.16!15.90!E2F2;;chrX:48644976..48644983,+!p2@GATA1!1.15!13.25!GATA1;;chr8:76319876..76319926,+!p1@HNF4G!1.15!13.25!HNF4G;;chr11:47279504..47279563,+!p1@NR1H3!1.14!29.15!NR1H3;;chr8:48650715..48650735,-!p1@CEBPD!1.13!1562.26!CEBPD;;chr11:61520075..61520136,+!p1@C11orf9!1.13!26.50!C11orf9;;chr19:46801639..46801699,+!p1@HIF3A!1.11!11.93!HIF3A;;chr20:48808064..48808086,+!p15@CEBPB!1.11!11.93!CEBPB;;chr18:55102628..55102646,+!p2@ONECUT2!1.11!11.93!ONECUT2;;chr15:60884706..60884743,-!p1@RORA!1.09!58.30!RORA;;chr10:51572408..51572454,+!p3@NCOA4!1.08!64.93!NCOA4;;chrX:131623044..131623089,-!p1@MBNL3!1.07!45.05!MBNL3;;chr2:46524897..46524911,+!p2@EPAS1!1.07!30.48!EPAS1;;chr1:23857698..23857733,-!p1@E2F2!1.07!19.88!E2F2;;chr22:29196547..29196563,-!p2@XBP1!1.06!390.90!XBP1;;chr12:54778471..54778528,-!p1@ZNF385A!1.06!10.60!ZNF385A;;chr6:134210243..134210257,+!p1@TCF21!1.06!10.60!TCF21;;chr7:50344289..50344323,+!p1@IKZF1!1.06!10.60!IKZF1;;chr8:11561684..11561751,+!p1@GATA4!1.06!10.60!GATA4;;chr19:46806868..46806883,+!p3@HIF3A!1.06!10.60!HIF3A;;chr19:50922187..50922204,+!p1@SPIB!1.06!10.60!SPIB;;chr20:42984330..42984364,+!p2@HNF4A!1.06!10.60!HNF4A;;chr20:43030002..43030028,+!p3@HNF4A!1.06!10.60!HNF4A;;chr22:29196492..29196503,-!p3@XBP1!1.05!15.90!XBP1;;chr18:19749386..19749404,+!p2@GATA6!1.05!14.58!GATA6;;chr14:35873101..35873119,-!p6@NFKBIA!1.04!13.25!NFKBIA;;chrX:106960285..106960299,-!p1@TSC22D3!1.03!263.69!TSC22D3;;chr18:55102598..55102623,+!p1@ONECUT2!1.01!9.28!ONECUT2;;chr20:48809000..48809053,+!p12@CEBPB!1.00!11.93!CEBPB;;chr5:176738887..176738934,-!p1@MXD3!0.99!59.63!MXD3;;chr19:50435736..50435781,+!p3@ATF5!0.98!11.93!ATF5;;chr8:37963466..37963506,+!p3@ASH2L!0.97!10.60!ASH2L;;chr6:126221034..126221056,+!p13@NCOA7!0.95!7.95!NCOA7;;chr7:73038867..73038878,-!p2@MLXIPL!0.95!7.95!MLXIPL;;chr17:53344945..53344977,+!p2@HLF!0.95!7.95!HLF;;chr19:13213555..13213568,-!p5@LYL1!0.95!7.95!LYL1;;chr2:68592394..68592405,+!p2@PLEK!0.95!7.95!PLEK;;chr4:174451350..174451363,-!p3@HAND2!0.95!7.95!HAND2;;chr1:161207986..161207998,-!p2@NR1I3!0.95!7.95!NR1I3;;chr1:199996831..199996843,+!p4@NR5A2!0.95!7.95!NR5A2;;chr1:47697965..47697991,-!p7@TAL1!0.95!7.95!TAL1;;chr20:61051039..61051057,-!p1@GATA5!0.95!7.95!GATA5;;chr21:39870339..39870443,-!p1@ERG!0.95!7.95!ERG;;chr11:19263160..19263176,-!p1@E2F8!0.94!9.28!E2F8;;chr8:81398444..81398472,+!p1@ZBTB10!0.93!31.80!ZBTB10;;chr17:1959369..1959388,+!p2@HIC1!0.92!19.88!HIC1;;chrX:131622958..131622978,-!p3@MBNL3!0.92!9.28!MBNL3;;chr21:40177845..40177863,+!p1@ETS2!0.91!445.22!ETS2;;chr5:76383133..76383186,-!p2@ZBED3!0.90!14.58!ZBED3;;chr8:71316428..71316459,-!p2@NCOA2!0.90!11.93!NCOA2;;chr17:53342311..53342400,+!p1@HLF!0.90!7.95!HLF;;chr1:212782094..212782109,+!p1@ATF3!0.89!193.46!ATF3;;chr3:187463179..187463201,-!p2@BCL6!0.89!29.15!BCL6;;chr3:24536253..24536328,-!p1@THRB!0.89!13.25!THRB;;chr2:157189180..157189290,-!p1@NR4A2!0.88!35.78!NR4A2;;chr14:73360799..73360817,-!p1@DPF3!0.88!23.85!DPF3;;chr2:74229812..74229867,+!p1@TET3!0.88!17.23!TET3;;chr3:24536485..24536500,-!p3@THRB!0.88!6.63!THRB;;chr11:16403882..16403908,-!p9@SOX6!0.88!6.63!SOX6;;chr12:101869096..101869118,+!p1@SPIC!0.88!6.63!SPIC;;chr12:121416340..121416360,+!p1@HNF1A!0.88!6.63!HNF1A;;chr6:1312155..1312187,+!p2@FOXQ1!0.88!6.63!FOXQ1;;chr7:73038889..73038905,-!p3@MLXIPL!0.88!6.63!MLXIPL;;chr19:50435673..50435690,+!p8@ATF5!0.88!6.63!ATF5;;chr19:58545454..58545498,+!p1@ZSCAN1!0.88!6.63!ZSCAN1;;chr1:161208013..161208038,-!p1@NR1I3!0.88!6.63!NR1I3;;chr1:214161358..214161377,+!p3@PROX1!0.88!6.63!PROX1;;chr1:47696918..47696935,-!p6@TAL1!0.88!6.63!TAL1;;chr1:92951607..92951661,-!p1@GFI1!0.88!6.63!GFI1;;chr9:137218281..137218340,+!p1@RXRA!0.87!190.81!RXRA;;chr12:52445218..52445237,+!p1@NR4A1!0.87!86.13!NR4A1;;chr13:72441315..72441454,-!p1@DACH1!0.87!13.25!DACH1;;chr6:7108179..7108199,+!p4@RREB1!0.86!13.25!RREB1;;chr11:113930291..113930339,+!p2@ZBTB16!0.86!10.60!ZBTB16;;chr18:6414884..6414942,-!p1@L3MBTL4!0.86!7.95!L3MBTL4;;chr3:12329358..12329393,+!p3@PPARG!0.85!15.90!PPARG;;chr19:13213662..13213686,-!p1@LYL1!0.85!9.28!LYL1;;chr22:38597987..38598021,+!p2@MAFF!0.84!38.43!MAFF;;chr22:46546494..46546525,+!p2@PPARA!0.84!11.93!PPARA;;chr7:113726357..113726443,+!p1@FOXP2!0.84!10.60!FOXP2;;chr2:239148671..239148686,-!p1@HES6!0.83!22.53!HES6;;chrX:131624056..131624069,-!p2@MBNL3!0.83!7.95!MBNL3;;chr18:53068911..53068935,-!p4@TCF4!0.83!6.63!TCF4;;chr20:2673383..2673441,+!p1@EBF4!0.82!9.28!EBF4;;chr14:35872962..35873025,-!p3@NFKBIA!0.81!14.58!NFKBIA;;chr9:94186085..94186096,-!p3@NFIL3!0.81!9.28!NFIL3;;chr19:926001..926046,+!p1@ARID3A!0.80!19.88!ARID3A;;chrX:66763856..66763896,+!p1@AR!0.80!7.95!AR;;chrY:2803415..2803468,+!p1@ZFY!0.80!5.30!ZFY;;chr9:135854074..135854089,+!p2@GFI1B!0.80!5.30!GFI1B;;chrX:131540410..131540438,-!p13@MBNL3!0.80!5.30!MBNL3;;chrX:48645010..48645015,+!p3@GATA1!0.80!5.30!GATA1;;chrX:131623026..131623039,-!p5@MBNL3!0.80!5.30!MBNL3;;chr11:16133375..16133390,-!p19@SOX6!0.80!5.30!SOX6;;chr11:16403910..16403933,-!p12@SOX6!0.80!5.30!SOX6;;chr7:97840743..97840786,+!p1@BHLHA15!0.80!5.30!BHLHA15;;chr8:28244374..28244382,-!p26@ZNF395!0.80!5.30!ZNF395;;chr19:54041574..54041589,+!p6@ZNF331!0.80!5.30!ZNF331;;chr1:40105299..40105326,-!p1@HEYL!0.80!5.30!HEYL;;chr1:42801540..42801562,-!p4@FOXJ3!0.80!5.30!FOXJ3;;chr1:47698007..47698019,-!p13@TAL1!0.80!5.30!TAL1;;chr20:62365987..62365998,+!p8@ZGPAT!0.80!5.30!ZGPAT;;chr17:6926362..6926377,+!p1@BCL6B!0.80!5.30!BCL6B;;chr19:13213634..13213645,-!p8@LYL1!0.80!5.30!LYL1;;chr3:71179746..71179783,-!p7@FOXP1!0.79!18.55!FOXP1;;chr16:86544113..86544145,+!p1@FOXF1!0.79!6.63!FOXF1;;chr2:8822176..8822196,+!p1@ID2!0.78!769.87!ID2;;chr13:41240717..41240735,-!p2@FOXO1!0.78!37.10!FOXO1;;chr10:94449675..94449694,+!p2@HHEX!0.78!14.58!HHEX;;chr5:76383070..76383117,-!p3@ZBED3!0.78!10.60!ZBED3;;chr11:695731..695765,-!p5@DEAF1!0.78!6.63!DEAF1;;chr3:71179699..71179744,-!p2@FOXP1!0.77!39.75!FOXP1;;chr15:96873984..96873999,+!p3@NR2F2!0.77!39.75!NR2F2;;chr17:17726907..17726958,-!p2@SREBF1!0.77!33.13!SREBF1;;chr3:12329397..12329433,+!p2@PPARG!0.77!11.93!PPARG;;chr2:10091815..10091864,+!p1@GRHL1!0.77!6.63!GRHL1;;chr8:106330656..106330684,+!p1@ZFPM2!0.76!13.25!ZFPM2;;chr22:29196433..29196445,-!p4@XBP1!0.76!5.30!XBP1;;chr13:41240737..41240787,-!p1@FOXO1!0.75!60.95!FOXO1;;chr2:10183651..10183713,+!p1@KLF11!0.75!37.10!KLF11;;chr20:42295713..42295738,+!p2@MYBL2!0.75!30.48!MYBL2;;chr19:4067039..4067064,-!p3@ZBTB7A!0.75!14.58!ZBTB7A;;chr4:38665769..38665801,+!p2@KLF3!0.73!43.73!KLF3;;chr19:17356436..17356481,-!p3@NR2F6!0.73!7.95!NR2F6;;chr20:6748325..6748352,+!p1@BMP2!0.73!6.63!BMP2;;chr6:7108210..7108221,+!p7@RREB1!0.73!5.30!RREB1;;chr6:91006575..91006602,-!p2@BACH2!0.72!6.63!BACH2;;chr8:28243813..28243839,-!p4@ZNF395!0.71!7.95!ZNF395;;chr19:56111614..56111634,+!p3@ZNF524!0.71!6.63!ZNF52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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000949;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001007;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002107;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002365;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002368;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002423;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003929;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005911;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007499;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0009854
 |ffid_belonging_in_development=UBERON:0001041,UBERON:0002532,UBERON:0006595,UBERON:0003104,UBERON:0004161,UBERON:0009497,UBERON:0010316
 |fonse_cell_line=

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FF:10086-102B5: Difference between revisions

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Revision as of 14:44, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0