FF:11286-116I8: Difference between revisions

Revision as of 20:28, 9 July 2012

Name:	Smooth Muscle Cells - Coronary Artery, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	coronary artery
dev stage	41 years old adult
sex	female
age	41
cell type	smooth muscle cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1346
catalog number	CA350-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.163
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.186
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.147
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.0562
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.411
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.496
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.071
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.206
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.192
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0506
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.183
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0556
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.0166
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.345
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.08
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.433
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.837
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.206
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.147
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11088

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.288
MA0003.1	MA0003.1	0.234
MA0004.1	MA0004.1	0.967
MA0006.1	MA0006.1	0.186
MA0007.1	MA0007.1	0.205
MA0009.1	MA0009.1	0.386
MA0014.1	MA0014.1	0.977
MA0017.1	MA0017.1	0.439
MA0018.2	MA0018.2	9.63559e-4
MA0019.1	MA0019.1	0.468
MA0024.1	MA0024.1	1.03643e-5
MA0025.1	MA0025.1	0.9
MA0027.1	MA0027.1	0.766
MA0028.1	MA0028.1	0.677
MA0029.1	MA0029.1	0.209
MA0030.1	MA0030.1	0.213
MA0031.1	MA0031.1	0.0269
MA0035.2	MA0035.2	0.409
MA0038.1	MA0038.1	0.602
MA0039.2	MA0039.2	0.364
MA0040.1	MA0040.1	0.484
MA0041.1	MA0041.1	0.308
MA0042.1	MA0042.1	0.786
MA0043.1	MA0043.1	0.00623
MA0046.1	MA0046.1	0.458
MA0047.2	MA0047.2	0.651
MA0048.1	MA0048.1	0.57
MA0050.1	MA0050.1	8.42175e-5
MA0051.1	MA0051.1	0.265
MA0052.1	MA0052.1	0.631
MA0055.1	MA0055.1	0.46
MA0057.1	MA0057.1	0.0968
MA0058.1	MA0058.1	0.885
MA0059.1	MA0059.1	0.208
MA0060.1	MA0060.1	0.106
MA0061.1	MA0061.1	0.509
MA0062.2	MA0062.2	0.36
MA0065.2	MA0065.2	0.626
MA0066.1	MA0066.1	0.3
MA0067.1	MA0067.1	0.0232
MA0068.1	MA0068.1	0.791
MA0069.1	MA0069.1	0.939
MA0070.1	MA0070.1	0.543
MA0071.1	MA0071.1	0.666
MA0072.1	MA0072.1	0.615
MA0073.1	MA0073.1	0.677
MA0074.1	MA0074.1	0.584
MA0076.1	MA0076.1	0.595
MA0077.1	MA0077.1	0.136
MA0078.1	MA0078.1	0.177
MA0079.2	MA0079.2	0.258
MA0080.2	MA0080.2	0.0589
MA0081.1	MA0081.1	0.765
MA0083.1	MA0083.1	7.89274e-6
MA0084.1	MA0084.1	0.823
MA0087.1	MA0087.1	0.673
MA0088.1	MA0088.1	0.407
MA0090.1	MA0090.1	0.00109
MA0091.1	MA0091.1	0.111
MA0092.1	MA0092.1	0.102
MA0093.1	MA0093.1	0.893
MA0099.2	MA0099.2	6.34839e-17
MA0100.1	MA0100.1	0.075
MA0101.1	MA0101.1	0.8
MA0102.2	MA0102.2	0.0461
MA0103.1	MA0103.1	0.268
MA0104.2	MA0104.2	0.414
MA0105.1	MA0105.1	0.569
MA0106.1	MA0106.1	0.206
MA0107.1	MA0107.1	0.367
MA0108.2	MA0108.2	2.71274e-8
MA0111.1	MA0111.1	0.0587
MA0112.2	MA0112.2	0.049
MA0113.1	MA0113.1	0.087
MA0114.1	MA0114.1	0.695
MA0115.1	MA0115.1	0.793
MA0116.1	MA0116.1	0.356
MA0117.1	MA0117.1	0.278
MA0119.1	MA0119.1	0.0568
MA0122.1	MA0122.1	0.692
MA0124.1	MA0124.1	0.448
MA0125.1	MA0125.1	0.981
MA0131.1	MA0131.1	0.436
MA0135.1	MA0135.1	0.793
MA0136.1	MA0136.1	0.347
MA0137.2	MA0137.2	0.32
MA0138.2	MA0138.2	0.893
MA0139.1	MA0139.1	0.772
MA0140.1	MA0140.1	0.226
MA0141.1	MA0141.1	0.418
MA0142.1	MA0142.1	0.716
MA0143.1	MA0143.1	0.521
MA0144.1	MA0144.1	0.512
MA0145.1	MA0145.1	0.102
MA0146.1	MA0146.1	0.247
MA0147.1	MA0147.1	0.899
MA0148.1	MA0148.1	0.704
MA0149.1	MA0149.1	0.631
MA0150.1	MA0150.1	0.0455
MA0152.1	MA0152.1	0.398
MA0153.1	MA0153.1	0.423
MA0154.1	MA0154.1	0.194
MA0155.1	MA0155.1	0.0373
MA0156.1	MA0156.1	0.682
MA0157.1	MA0157.1	0.298
MA0159.1	MA0159.1	0.231
MA0160.1	MA0160.1	0.569
MA0162.1	MA0162.1	0.0995
MA0163.1	MA0163.1	0.202
MA0164.1	MA0164.1	0.632
MA0258.1	MA0258.1	0.279
MA0259.1	MA0259.1	0.661

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11088

Novel motif	Logo	P-value
1	1	0.905
10	10	0.144
100	100	0.9
101	101	0.637
102	102	0.95
103	103	0.524
104	104	0.339
105	105	0.378
106	106	0.0454
107	107	0.0273
108	108	0.608
109	109	0.0876
11	11	0.101
110	110	0.504
111	111	0.448
112	112	0.624
113	113	0.215
114	114	0.314
115	115	0.688
116	116	0.0643
117	117	0.799
118	118	0.697
119	119	0.34
12	12	0.697
120	120	0.203
121	121	0.421
122	122	0.428
123	123	0.0341
124	124	0.961
125	125	0.69
126	126	0.902
127	127	0.732
128	128	0.204
129	129	0.601
13	13	0.985
130	130	0.245
131	131	0.137
132	132	0.409
133	133	0.911
134	134	0.15
135	135	0.246
136	136	0.852
137	137	0.297
138	138	0.494
139	139	0.32
14	14	0.553
140	140	0.585
141	141	0.42
142	142	0.941
143	143	0.0365
144	144	0.999
145	145	0.17
146	146	0.363
147	147	0.192
148	148	0.914
149	149	0.153
15	15	0.684
150	150	0.128
151	151	0.482
152	152	0.00846
153	153	0.396
154	154	0.25
155	155	0.0162
156	156	0.96
157	157	0.833
158	158	0.0311
159	159	0.286
16	16	0.249
160	160	0.0936
161	161	0.567
162	162	0.755
163	163	0.941
164	164	0.856
165	165	0.559
166	166	0.753
167	167	0.466
168	168	0.478
169	169	0.0682
17	17	0.103
18	18	0.12
19	19	0.159
2	2	0.397
20	20	0.353
21	21	0.584
22	22	0.142
23	23	0.145
24	24	0.198
25	25	0.272
26	26	0.264
27	27	0.484
28	28	0.227
29	29	0.861
3	3	0.519
30	30	0.118
31	31	0.52
32	32	0.0451
33	33	0.846
34	34	0.201
35	35	0.924
36	36	0.781
37	37	0.154
38	38	0.541
39	39	0.255
4	4	0.744
40	40	0.159
41	41	0.795
42	42	0.649
43	43	0.387
44	44	0.829
45	45	0.172
46	46	0.257
47	47	0.406
48	48	0.18
49	49	0.683
5	5	0.766
50	50	0.395
51	51	0.773
52	52	0.554
53	53	0.609
54	54	0.502
55	55	0.259
56	56	0.511
57	57	0.588
58	58	0.548
59	59	0.0937
6	6	0.741
60	60	0.592
61	61	0.938
62	62	0.706
63	63	0.274
64	64	0.503
65	65	0.144
66	66	0.391
67	67	0.996
68	68	0.291
69	69	0.359
7	7	0.813
70	70	0.279
71	71	0.304
72	72	0.825
73	73	0.0037
74	74	0.699
75	75	0.563
76	76	0.346
77	77	0.00375
78	78	0.603
79	79	0.337
8	8	0.0866
80	80	0.303
81	81	0.806
82	82	0.639
83	83	0.988
84	84	0.97
85	85	0.149
86	86	0.879
87	87	0.0275
88	88	0.182
89	89	0.0659
9	9	0.149
90	90	0.136
91	91	0.46
92	92	0.569
93	93	0.903
94	94	0.769
95	95	0.111
96	96	0.898
97	97	0.25
98	98	0.856
99	99	0.00571

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11088

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000172 human smooth muscle cell of coronary artery sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000359 (vascular associated smooth muscle cell)
0002592 (smooth muscle cell of the coronary artery)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0001637 (artery)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003103 (compound organ)
0004573 (systemic artery)
0003498 (heart blood vessel)
0003509 (arterial blood vessel)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0005985 (coronary vessel)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0001621 (coronary artery)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000167 (smooth muscle cell sample)
0000172 (human smooth muscle cell of coronary artery sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000514 (smooth muscle myoblast)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!1.89!76.02!SOX17;;chr21:38071430..38071456,+!p1@SIM2!1.58!37.00!SIM2;;chr11:65686802..65686818,+!p6@DRAP1!1.53!55.60!DRAP1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.49!29.72!ZBED1;;chr11:46299199..46299233,+!p1@CREB3L1!1.45!135.66!CREB3L1;;chr16:86600426..86600441,+!p1@FOXC2!1.43!63.08!FOXC2;;chr11:46299539..46299620,+!p2@CREB3L1!1.35!36.19!CREB3L1;;chr20:30433396..30433414,-!p1@FOXS1!1.33!20.22!FOXS1;;chr11:65687362..65687436,+!p3@DRAP1!1.32!89.57!DRAP1;;chr2:19558373..19558392,-!p1@OSR1!1.30!51.35!OSR1;;chr6:34204921..34204939,+!p3@HMGA1!1.28!529.11!HMGA1;;chr6:134210243..134210257,+!p1@TCF21!1.26!17.39!TCF21;;chr11:65686732..65686756,+!p2@DRAP1!1.25!69.55!DRAP1;;chr18:19749541..19749557,+!p1@GATA6!1.16!42.46!GATA6;;chr15:67418047..67418093,+!p4@SMAD3!1.10!14.76!SMAD3;;chr11:65687222..65687240,+!p7@DRAP1!1.09!14.56!DRAP1;;chr11:65667884..65667895,-!p2@FOSL1!1.08!43.47!FOSL1;;chr20:6748325..6748352,+!p1@BMP2!1.03!14.15!BMP2;;chr7:1577899..1577943,+!p3@MAFK!1.02!9.50!MAFK;;chr8:11561684..11561751,+!p1@GATA4!1.01!9.30!GATA4;;chr4:174450089..174450153,-!p2@HAND2!0.99!8.69!HAND2;;chr1:170632285..170632309,+!p1@PRRX1!0.98!9.70!PRRX1;;chr5:72744594..72744609,-!p1@FOXD1!0.97!39.02!FOXD1;;chr1:170633262..170633285,+!p3@PRRX1!0.97!9.50!PRRX1;;chr11:65667846..65667868,-!p1@FOSL1!0.96!220.78!FOSL1;;chr1:170633348..170633399,+!p2@PRRX1!0.96!11.32!PRRX1;;chr15:67418177..67418204,+!p9@SMAD3!0.96!8.09!SMAD3;;chr15:67418119..67418162,+!p5@SMAD3!0.95!8.90!SMAD3;;chr12:124873357..124873401,-!p1@NCOR2!0.94!92.40!NCOR2;;chr9:35732647..35732678,+!p2@CREB3!0.92!42.66!CREB3;;chr16:86544113..86544145,+!p1@FOXF1!0.92!9.30!FOXF1;;chr2:239756671..239756732,+!p1@TWIST2!0.91!23.66!TWIST2;;chr2:239756739..239756755,+!p2@TWIST2!0.91!12.33!TWIST2;;chr11:65687158..65687216,+!p4@DRAP1!0.90!41.45!DRAP1;;chr16:86600870..86600921,+!p2@FOXC2!0.90!6.87!FOXC2;;chr11:65687243..65687276,+!p8@DRAP1!0.88!9.10!DRAP1;;chr11:34642612..34642646,+!p1@EHF!0.88!6.67!EHF;;chr12:66218923..66218934,+!p14@HMGA2!0.87!6.47!HMGA2;;chr18:19749386..19749404,+!p2@GATA6!0.86!9.10!GATA6;;chr1:170632959..170632987,+!p4@PRRX1!0.85!6.67!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!0.85!6.07!PRRX1;;chr5:72744445..72744466,-!p2@FOXD1!0.84!10.31!FOXD1;;chr7:150945865..150945896,-!p4@SMARCD3!0.84!5.86!SMARCD3;;chr12:66218836..66218888,+!p1@HMGA2!0.83!58.23!HMGA2;;chr12:66218255..66218304,+!p3@HMGA2!0.82!15.77!HMGA2;;chr15:67430351..67430366,+!p10@SMAD3!0.82!5.66!SMAD3;;chr19:47523058..47523114,+!p1@NPAS1!0.82!5.66!NPAS1;;chr4:174451370..174451387,-!p1@HAND2!0.82!5.66!HAND2;;chr11:65686776..65686787,+!p9@DRAP1!0.81!6.67!DRAP1;;chr21:38071403..38071428,+!p2@SIM2!0.81!5.46!SIM2;;chr6:34204973..34204990,+!p4@HMGA1!0.79!74.40!HMGA1;;chr17:59477233..59477263,+!p1@TBX2!0.78!16.78!TBX2;;chr12:66218904..66218913,+!p11@HMGA2!0.78!5.05!HMGA2;;chr17:3571863..3571881,-!p1@TAX1BP3!0.77!383.34!TAX1BP3;;chr11:65686952..65686975,+!p5@DRAP1!0.77!29.52!DRAP1;;chr12:66218598..66218645,+!p2@HMGA2!0.77!24.46!HMGA2;;chr1:151032860..151032918,+!p1@MLLT11!0.75!60.65!MLLT11;;chr16:86600458..86600461,+!p3@FOXC2!0.75!4.65!FOXC2;;chr22:38598086..38598105,+!p1@MAFF!0.73!51.56!MAFF;;chr10:94449703..94449718,+!p1@HHEX!0.73!18.60!HHEX;;chr8:106330656..106330684,+!p1@ZFPM2!0.73!12.33!ZFPM2;;chr5:72743793..72743855,-!p4@FOXD1!0.72!5.05!FOXD1;;chr6:34204672..34204692,+!p1@HMGA1!0.71!530.12!HMGA1;;chr20:50721803..50721857,-!p2@ZFP64!0.70!6.67!ZFP64;;chr15:67430381..67430396,+!p21@SMAD3!0.70!4.04!SMAD3;;chr1:37940170..37940190,+!p1@ZC3H12A!0.69!55.20!ZC3H12A;;chr17:59477275..59477286,+!p3@TBX2!0.68!5.26!TBX2;;chr15:83953397..83953425,-!p1@BNC1!0.68!4.45!BNC1;;chr1:170633100..170633112,+!p19@PRRX1!0.68!3.84!PRRX1;;chr7:44143925..44143970,+!p1@AEBP1!0.67!94.22!AEBP1;;chr12:53614115..53614154,-!p1@RARG!0.67!22.64!RARG;;chr20:42543441..42543497,+!p1@TOX2!0.67!19.01!TOX2;;chr17:1959369..1959388,+!p2@HIC1!0.67!10.72!HIC1;;chr8:106330696..106330719,+!p2@ZFPM2!0.67!4.85!ZFPM2;;chr11:46299443..46299459,+!p4@CREB3L1!0.67!3.64!CREB3L1;;chr2:71127699..71127744,+!p1@VAX2!0.66!8.09!VAX2;;chr7:44143978..44143989,+!p2@AEBP1!0.66!7.08!AEBP1;;chr9:35732592..35732640,+!p1@CREB3!0.65!53.98!CREB3;;chr12:57504975..57505019,-!p2@STAT6!0.65!16.17!STAT6;;chr3:52001448..52001478,-!p2@PCBP4!0.64!55.60!PCBP4;;chr6:34205372..34205412,+!p5@HMGA1!0.64!20.02!HMGA1;;chr1:151032922..151032951,+!p2@MLLT11!0.64!6.07!MLLT11;;chr8:145159846..145159889,+!p6@MAF1!0.64!5.05!MAF1;;chr4:81118647..81118666,+!p1@PRDM8!0.64!4.65!PRDM8;;chr11:46299186..46299195,+!p3@CREB3L1!0.64!3.84!CREB3L1;;chr7:35293685..35293718,-!p1@TBX20!0.63!3.23!TBX20;;chr8:55370720..55370733,+!p2@SOX17!0.63!3.23!SOX17;;chr9:35732514..35732530,+!p5@CREB3!0.62!4.85!CREB3;;chr4:2263809..2263854,-!p1@MXD4!0.61!143.95!MXD4;;chr12:124873852..124873881,-!p3@NCOR2!0.61!22.04!NCOR2;;chr8:72756063..72756125,-!p1@MSC!0.61!6.87!MSC;;chr8:72756637..72756664,-!p3@MSC!0.61!3.64!MSC;;chr1:8938709..8938720,-!p3@ENO1!0.60!176.71!ENO1;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BX1;;chr1:221052994..221053008,+!p6@HLX!0.14!0.61!HLX;;chr12:7079807..7079848,-!p1@PHB2!0.13!217.35!PHB2;;chr13:45010939..45011033,-!p1@TSC22D1!0.13!80.67!TSC22D1;;chr3:52008016..52008071,-!p1@ABHD14A-ACY1,p1@ABHD14B,p1@PCBP4!0.13!69.55!PCBP4;;chr6:33422343..33422394,+!p1@ZBTB9!0.13!7.48!ZBTB9;;chr3:39195075..39195088,-!p1@CSRNP1!0.13!6.87!CSRNP1;;chr9:139294638..139294678,-!p@chr9:139294638..139294678,-!0.13!5.86!SNAPC4;;chr11:62521614..62521646,-!p1@ZBTB3!0.13!5.46!ZBTB3;;chr20:32319784..32319813,+!p1@ZNF341!0.13!5.26!ZNF341;;chrX:47509994..47510008,-!p2@ELK1!0.13!4.25!ELK1;;chr12:3069037..3069119,+!p2@TEAD4!0.13!3.44!TEAD4;;chr1:161736140..161736151,+!p3@ATF6!0.13!3.03!ATF6;;chr19:18392250..18392260,-!p4@JUND!0.13!3.03!JUND;;chr8:37963407..37963454,+!p2@ASH2L!0.13!2.83!ASH2L;;chr19:36134528..36134563,+!p1@ETV2!0.13!2.63!ETV2;;chr1:8483756..8483809,-!p5@RERE!0.13!2.63!RERE;;chr20:48808114..48808168,+!p5@CEBPB!0.13!2.22!CEBPB;;chr19:47615426..47615439,-!p5@ZC3H4!0.13!2.02!ZC3H4;;chr14:24837368..24837401,+!p1@NFATC4!0.13!2.02!NFATC4;;chr15:96874063..96874074,+!p10@NR2F2!0.13!1.42!NR2F2;;chr17:79885633..79885645,-!p4@MAFG!0.13!1.21!MAFG;;chr18:47814010..47814021,-!p3@CXXC1!0.13!1.21!CXXC1;;chr9:4299552..4299598,-!p5@GLIS3!0.13!1.21!GLIS3;;chr3:71114115..71114126,-!p14@FOXP1!0.13!1.21!FOXP1;;chr19:50168861..50168873,-!p3@IRF3!0.13!1.21!IRF3;;chr7:4721870..4721878,+!p2@FOXK1!0.13!1.01!FOXK1;;chr16:30569604..30569629,-!p3@ZNF764!0.13!1.01!ZNF764;;chr12:56583297..56583304,-!p4@SMARCC2!0.13!1.01!SMARCC2;;chr12:49413577..49413581,-!p5@MLL2!0.13!0.81!MLL2;;chr19:49864746..49864780,-!p2@TEAD2!0.13!0.81!TEAD2;;chr19:50432132..50432217,+!p2@ATF5!0.13!0.61!ATF5;;chr1:78445148..78445170,-!p6@FUBP1!0.13!0.61!FUBP1;;chr12:10875612..10875631,-!p9@CSDA!0.13!0.61!CSDA;;chr12:27485889..27485900,+!p4@ARNTL2!0.13!0.61!ARNTL2;;chr14:24630902..24630948,+!p2@IRF9!0.13!0.61!IRF9;;chr6:135502501..135502546,+!p1@MYB!0.13!0.61!MYB;;chr17:41622834..41622883,-!p6@ETV4!0.13!0.61!ETV4;;chr2:46602879..46602899,+!p8@EPAS1!0.13!0.61!EPAS1;;chrX:70503447..70503517,+!p1@NONO!0.12!95.83!NONO;;chr20:30193083..30193098,+!p1@ID1!0.12!95.83!ID1;;chr22:24129138..24129201,+!p1@SMARCB1!0.12!59.85!SMARCB1;;chr12:56753869..56753930,-!p1@STAT2!0.12!52.97!STAT2;;chr19:6424783..6424802,-!p2@KHSRP!0.12!23.86!KHSRP;;chr16:30798492..30798535,-!p1@ZNF629!0.12!18.20!ZNF629;;chr11:62369229..62369289,-!p2@MTA2!0.12!16.78!MTA2;;chr8:145159357..145159373,+!p3@MAF1!0.12!14.56!MAF1;;chr11:128563948..128564003,+!p1@FLI1!0.12!13.75!FLI1;;chr6:144329384..144329405,-!p1@PLAGL1!0.12!13.34!PLAGL1;;chr14:65569244..65569264,-!p2@MAX!0.12!13.14!MAX;;chr12:3068544..3068597,+!p1@TEAD4!0.12!6.47!TEAD4;;chr16:69419749..69419786,-!p2@TERF2!0.12!6.07!TERF2;;chrX:70503529..70503549,+!p2@NONO!0.12!5.66!NONO;;chr9:116638565..116638606,+!p1@ZNF618!0.12!4.25!ZNF618;;chr8:128750654..128750793,+!p3@MYC!0.12!4.04!MYC;;chr11:62369352..62369373,-!p5@MTA2!0.12!3.84!MTA2;;chr3:71007886..71007887,-!p8@FOXP1!0.12!3.03!FOXP1;;chr1:8484142..8484232,-!p10@RERE!0.12!2.43!RERE;;chr15:90895471..90895543,+!p1@ZNF774!0.12!1.82!ZNF774;;
+|ffid_belonging_in_development=CL:0000355,CL:0000222,CL:0000514
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11286-116I8: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:28, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0