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FFCP PHASE1:Mm9::chrX:140367632..140367685,-: Difference between revisions

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|id=chrX:140367632..140367685,-
|id=chrX:140367632..140367685,-
|ontology_enrichment_celltype=CL:0000540!2.39e-12!33;CL:0000047!2.39e-12!33;CL:0000031!2.39e-12!33;CL:0000404!2.39e-12!33;CL:0000117!4.39e-12!23;CL:0000337!4.39e-12!23;CL:0000221!3.98e-08!44;CL:0000133!3.98e-08!44;CL:0002319!4.64e-08!43;CL:0000393!5.20e-08!39;CL:0000211!5.20e-08!39
|ontology_enrichment_celltype=CL:0000540!2.39e-12!33;CL:0000047!2.39e-12!33;CL:0000031!2.39e-12!33;CL:0000404!2.39e-12!33;CL:0000117!4.39e-12!23;CL:0000337!4.39e-12!23;CL:0000221!3.98e-08!44;CL:0000133!3.98e-08!44;CL:0002319!4.64e-08!43;CL:0000393!5.20e-08!39;CL:0000211!5.20e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000540,2.15e-13,33;CL:0000047,2.15e-13,33;CL:0000031,2.15e-13,33;CL:0000404,2.15e-13,33;CL:0000117,4.20e-13,23;CL:0000337,4.20e-13,23;CL:0000393,2.86e-09,39;CL:0000211,2.86e-09,39;CL:0000221,8.66e-08,44;CL:0000133,8.66e-08,44;CL:0002319,1.03e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.66e-18!71;UBERON:0003075!2.66e-18!71;UBERON:0007284!2.66e-18!71;UBERON:0001017!8.94e-18!73;UBERON:0005743!8.94e-18!73;UBERON:0004121!3.55e-17!102;UBERON:0000924!3.55e-17!102;UBERON:0006601!3.55e-17!102;UBERON:0000073!3.60e-17!75;UBERON:0001016!3.60e-17!75;UBERON:0003056!2.83e-15!49;UBERON:0001049!9.46e-15!52;UBERON:0005068!9.46e-15!52;UBERON:0006241!9.46e-15!52;UBERON:0007135!9.46e-15!52;UBERON:0000033!1.81e-14!63;UBERON:0002020!2.97e-13!34;UBERON:0000955!3.32e-13!50;UBERON:0006238!3.32e-13!50;UBERON:0003080!6.46e-13!40;UBERON:0002780!1.11e-12!39;UBERON:0001890!1.11e-12!39;UBERON:0006240!1.11e-12!39;UBERON:0002616!1.27e-12!49;UBERON:0002791!1.16e-10!29;UBERON:0003528!1.16e-10!29;UBERON:0001893!1.16e-10!29;UBERON:0000468!3.49e-08!333;UBERON:0000956!8.76e-08!21;UBERON:0001869!8.76e-08!21;UBERON:0000203!8.76e-08!21;UBERON:0000153!1.28e-07!94
|ontology_enrichment_uberon=UBERON:0002346!2.66e-18!71;UBERON:0003075!2.66e-18!71;UBERON:0007284!2.66e-18!71;UBERON:0001017!8.94e-18!73;UBERON:0005743!8.94e-18!73;UBERON:0004121!3.55e-17!102;UBERON:0000924!3.55e-17!102;UBERON:0006601!3.55e-17!102;UBERON:0000073!3.60e-17!75;UBERON:0001016!3.60e-17!75;UBERON:0003056!2.83e-15!49;UBERON:0001049!9.46e-15!52;UBERON:0005068!9.46e-15!52;UBERON:0006241!9.46e-15!52;UBERON:0007135!9.46e-15!52;UBERON:0000033!1.81e-14!63;UBERON:0002020!2.97e-13!34;UBERON:0000955!3.32e-13!50;UBERON:0006238!3.32e-13!50;UBERON:0003080!6.46e-13!40;UBERON:0002780!1.11e-12!39;UBERON:0001890!1.11e-12!39;UBERON:0006240!1.11e-12!39;UBERON:0002616!1.27e-12!49;UBERON:0002791!1.16e-10!29;UBERON:0003528!1.16e-10!29;UBERON:0001893!1.16e-10!29;UBERON:0000468!3.49e-08!333;UBERON:0000956!8.76e-08!21;UBERON:0001869!8.76e-08!21;UBERON:0000203!8.76e-08!21;UBERON:0000153!1.28e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.15e-18,73;UBERON:0002346,1.57e-18,64;UBERON:0003075,1.57e-18,64;UBERON:0007284,1.57e-18,64;UBERON:0001016,1.81e-17,75;UBERON:0003056,1.60e-16,49;UBERON:0000073,2.03e-16,54;UBERON:0004121,4.05e-16,95;UBERON:0000924,4.05e-16,95;UBERON:0006601,4.05e-16,95;UBERON:0001049,6.12e-16,52;UBERON:0005068,6.12e-16,52;UBERON:0006241,6.12e-16,52;UBERON:0007135,6.12e-16,52;UBERON:0010371,8.82e-16,73;UBERON:0002020,1.11e-14,34;UBERON:0003080,2.75e-14,40;UBERON:0002780,4.97e-14,39;UBERON:0001890,4.97e-14,39;UBERON:0006240,4.97e-14,39;UBERON:0000955,1.05e-13,47;UBERON:0006238,1.05e-13,47;UBERON:0002616,4.54e-13,46;UBERON:0003528,8.01e-12,29;UBERON:0002791,8.01e-12,29;UBERON:0001893,8.01e-12,29;UBERON:0010314,2.18e-10,92;UBERON:0000956,1.16e-08,21;UBERON:0001869,1.16e-08,21;UBERON:0000203,1.16e-08,21
|phase1_expression=6.08565618998217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.279972843250725,0,0,0,0,0,0,0,178.847751399884,243.864841444407,140.076740174866,0,0,0,0.988866362566974,0,0.299600110518405,2.30530983192933,162.481622487384,122.99040982017,122.409127506504,18.852964970651,19.6573001446936,226.73046934688,178.655957977993,121.336879832523,6.60695285996332,7.40586560894089,7.83393319606842,172.111605487903,244.272008418434,223.47183596885,2.51264699101243,6.75315132038016,7.02871939773326,118.146062774941,144.649627691889,267.856003650957,0.227178579999552,0.0755715601067855,6.08715426273523,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,4.50698943285378,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,8.32729568477452,14.9188084372949,11.3001593655469,8.59119051149949,14.8161770990988,0.125666591329675,0,0,0,5.66183974815932,0.220841518460394,0,0,2.34224637609238,2.93225389538837,0,0,0,0,10.3355541189328,8.6925114535539,199.036493746777,14.2535942557667,18.1557974704535,7.89594569326328,14.2772311499627,3.97173519016234,0,0,0.210441855886474,8.97831056442656,33.1059030384201,49.517085696471,45.9649694398931,34.5625415688746,35.7437279594731,26.611289774963,3.10444044886819,15.089759505299,16.4522289746003,15.1317966780996,12.2749610159442,11.3999372182495,12.537077994798,5.76189981942242,1.19420560091096,0,0,0,0.621377317606506,2.34526059981096,0.36012412292203,0.473489471170421,0,0.462801338662135,0,0,0.350296027101508,0,0,0,0,0,0,5.67782861123144,236.783513084733,0,0.264450566663544,4.69234151177515,6.50262681209228,7.60318021800351,5.44545516483025,2.66853652613844,2.66315876557583,0,2.47048432086016,1.25667604400135,1.79060824837036,1.9496408711912,0,0,0.199141273254367,6.82804443431094,10.5108631600951,6.76246414038483,5.49858585182348,2.90928730751439,3.85747009396752,0,0,0,0,0,1.33476084572875,1.96558995113203,0,0.405720242777006,0.241177159752417,0.25462585178142,0.863088412352432,0.486405680325106,0,0,2.23284568601102,0.936113019343682,0.505157755894224,0.538192240565737,0,0,9.28507917675375,8.31121379854332,4.41337223015489,2.34690248288502,0.670025029767263,0.952174563544055,0.390267295715598,2.52216230569906,2.6575762757853,1.91345722388985,0,0.172684981865896,0,0,0,0,0,7.70642831941401,6.68106613575558,0,0.252470927204373,3.15508219416257,4.68526493155966,5.60100834105277,4.06246956519338,6.46116154838943,7.92614286208731,3.64329631507405,8.76767573733936,8.69633111482352,107.321319684884,0,1.42452482933804,1.14020871547503,0,1.32745138339963,7.52619972080442,3.62788268357701,4.52652191414155,4.13422650033082,4.30409207121498,4.9101375701962,9.45187696641514,11.4079161083111,3.47640433729398,1.05418608574999,0,2.04263763452273,14.7650097105674,6.85601024048599,16.0752776273694,22.3448694389265,17.1234064897988,19.4167844310503,6.08929898229199,0,0,0,0,5.9741837877485,1.44751019827574,0.477489376012546,0.164140899745061,0,5.19190845629427,0,1.44470807574256,0.740778109478847,0,0,0,0,0,0,0,7.27572785236611,10.1659733563424,6.37231510848627,5.64538399239065,3.27543845619266,4.04593039154462,2.23164330458407,0,0,0,0,0.598066184175915,0.165458490457098,0.194451188344048,0.387479470433193,0,0.352071715937262,0.13020438484395,0,0,0,0,0.608175645870493,1.1298205288131,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,34.4498623996411,36.365693684067,41.821372481076,35.0580491981123,24.6629707117431,37.0143009720953,34.4261475118221,26.1186297870048,24.0165476761628,21.7459330935764,61.3383224222484,84.9922980344196,71.8788480224905,58.3456120963906,77.5568701723535,48.3508427223537,52.8947212167844,53.7751499393514,37.8684667318342,47.0016813880663,54.2445701765113,53.1926282708735,56.9340365416885,54.357354391734,54.8508728526107,54.7737744975535,44.1519281849899,43.790393045261,44.9173631875604,57.2603799322806,51.0875186054269,44.191475733675,57.7015579672517,54.5049062371232,58.8183627595816,50.1764624797642,45.7319932181931,45.5110600787468,53.9142331968071,49.9416621775387,37.7259357634874,38.0227301969675,32.7384834535751,47.8754839264635,35.3019098095489,76.1922262710735,37.1951257428199,41.6849844853699,19.7026982030909,2.42650561031467,0.927471342481686
|phase1_expression=6.08565618998217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.279972843250725,0,0,0,0,0,0,0,178.847751399884,243.864841444407,140.076740174866,0,0,0,0.988866362566974,0,0.299600110518405,2.30530983192933,162.481622487384,122.99040982017,122.409127506504,18.852964970651,19.6573001446936,226.73046934688,178.655957977993,121.336879832523,6.60695285996332,7.40586560894089,7.83393319606842,172.111605487903,244.272008418434,223.47183596885,2.51264699101243,6.75315132038016,7.02871939773326,118.146062774941,144.649627691889,267.856003650957,0.227178579999552,0.0755715601067855,6.08715426273523,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,4.50698943285378,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,8.32729568477452,14.9188084372949,11.3001593655469,8.59119051149949,14.8161770990988,0.125666591329675,0,0,0,5.66183974815932,0.220841518460394,0,0,2.34224637609238,2.93225389538837,0,0,0,0,10.3355541189328,8.6925114535539,199.036493746777,14.2535942557667,18.1557974704535,7.89594569326328,14.2772311499627,3.97173519016234,0,0,0.210441855886474,8.97831056442656,33.1059030384201,49.517085696471,45.9649694398931,34.5625415688746,35.7437279594731,26.611289774963,3.10444044886819,15.089759505299,16.4522289746003,15.1317966780996,12.2749610159442,11.3999372182495,12.537077994798,5.76189981942242,1.19420560091096,0,0,0,0.621377317606506,2.34526059981096,0.36012412292203,0.473489471170421,0,0.462801338662135,0,0,0.350296027101508,0,0,0,0,0,0,5.67782861123144,236.783513084733,0,0.264450566663544,4.69234151177515,6.50262681209228,7.60318021800351,5.44545516483025,2.66853652613844,2.66315876557583,0,2.47048432086016,1.25667604400135,1.79060824837036,1.9496408711912,0,0,0.199141273254367,6.82804443431094,10.5108631600951,6.76246414038483,5.49858585182348,2.90928730751439,3.85747009396752,0,0,0,0,0,1.33476084572875,1.96558995113203,0,0.405720242777006,0.241177159752417,0.25462585178142,0.863088412352432,0.486405680325106,0,0,2.23284568601102,0.936113019343682,0.505157755894224,0.538192240565737,0,0,9.28507917675375,8.31121379854332,4.41337223015489,2.34690248288502,0.670025029767263,0.952174563544055,0.390267295715598,2.52216230569906,2.6575762757853,1.91345722388985,0,0.172684981865896,0,0,0,0,0,7.70642831941401,6.68106613575558,0,0.252470927204373,3.15508219416257,4.68526493155966,5.60100834105277,4.06246956519338,6.46116154838943,7.92614286208731,3.64329631507405,8.76767573733936,8.69633111482352,107.321319684884,0,1.42452482933804,1.14020871547503,0,1.32745138339963,7.52619972080442,3.62788268357701,4.52652191414155,4.13422650033082,4.30409207121498,4.9101375701962,9.45187696641514,11.4079161083111,3.47640433729398,1.05418608574999,0,2.04263763452273,14.7650097105674,6.85601024048599,16.0752776273694,22.3448694389265,17.1234064897988,19.4167844310503,6.08929898229199,0,0,0,0,5.9741837877485,1.44751019827574,0.477489376012546,0.164140899745061,0,5.19190845629427,0,1.44470807574256,0.740778109478847,0,0,0,0,0,0,0,7.27572785236611,10.1659733563424,6.37231510848627,5.64538399239065,3.27543845619266,4.04593039154462,2.23164330458407,0,0,0,0,0.598066184175915,0.165458490457098,0.194451188344048,0.387479470433193,0,0.352071715937262,0.13020438484395,0,0,0,0,0.608175645870493,1.1298205288131,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,34.4498623996411,36.365693684067,41.821372481076,35.0580491981123,24.6629707117431,37.0143009720953,34.4261475118221,26.1186297870048,24.0165476761628,21.7459330935764,61.3383224222484,84.9922980344196,71.8788480224905,58.3456120963906,77.5568701723535,48.3508427223537,52.8947212167844,53.7751499393514,37.8684667318342,47.0016813880663,54.2445701765113,53.1926282708735,56.9340365416885,54.357354391734,54.8508728526107,54.7737744975535,44.1519281849899,43.790393045261,44.9173631875604,57.2603799322806,51.0875186054269,44.191475733675,57.7015579672517,54.5049062371232,58.8183627595816,50.1764624797642,45.7319932181931,45.5110600787468,53.9142331968071,49.9416621775387,37.7259357634874,38.0227301969675,32.7384834535751,47.8754839264635,35.3019098095489,76.1922262710735,37.1951257428199,41.6849844853699,19.7026982030909,2.42650561031467,0.927471342481686
|short_description=p1@Dcx
|short_description=p1@Dcx
}}
}}

Revision as of 14:29, 13 November 2012

Short description:p1@Dcx
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dcx_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000087313, ENSMUST00000125768, NM_001110222, uc009umo.2, uc009ump.2, uc009umq.2_5end
EntrezGene:Dcx
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dcx

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3178.85
Mouse Granule cells, donor2.CNhs12357.11731-123E3243.86
Mouse Granule cells, donor3.CNhs12108.11636-122C7140.08
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5162.48
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5122.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9122.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D519.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2226.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2178.66
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6121.34
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4172.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4244.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8223.47
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6118.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6144.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1267.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C58.33
adrenal gland, embryo E16.CNhs11004.1254-43D614.92
adrenal gland, embryo E17.CNhs11043.1263-45I111.30
adrenal gland, embryo E18.CNhs11026.1262-18F58.59
adrenal gland, neonate N00.CNhs11191.1311-23C114.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F55.66
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.34
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F1199.04
cortex, adult.CNhs10473.12-14D514.25
cortex, neonate N30.CNhs11107.1392-42F218.16
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B214.28
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.97
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C68.98
eyeball, embryo E14.CNhs10521.399-16E233.11
eyeball, embryo E15.CNhs10593.426-16C949.52
eyeball, embryo E17.CNhs11023.1261-18D445.96
eyeball, neonate N00.CNhs11207.633-15C634.56
eyeball, neonate N01.CNhs11140.1532-43E735.74
eyeball, neonate N02.CNhs11205.1551-44G826.61
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E215.09
forelimb, embryo E12.CNhs10600.359-14H216.45
forelimb, embryo E13.CNhs10589.384-1E215.13
forelimb, embryo E14.CNhs10577.413-26A812.27
forelimb, embryo E15.CNhs11007.437-20E711.40
forelimb, embryo E17.CNhs10598.1517-43C412.54
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G1236.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D87.60
intestine, embryo E16.CNhs10585.463-22H45.45
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I96.83
kidney, embryo E15.CNhs10997.434-16F810.51
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G73.86
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G29.29
lung, embryo E14.CNhs10604.404-26F88.31
lung, embryo E15.CNhs11020.432-17C54.41
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A36.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.77
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I9107.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F47.53
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E54.53
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D79.45
pancreas, neonate N02.CNhs11139.1539-43D811.41
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E614.77
pituitary gland, embryo E13.CNhs11009.370-44C76.86
pituitary gland, embryo E14.CNhs11037.398-44A516.08
pituitary gland, embryo E15.CNhs10592.427-16B922.34
pituitary gland, embryo E16.CNhs11036.449-43F617.12
pituitary gland, embryo E17.CNhs11039.1265-44F519.42
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G45.97
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E37.28
stomach, embryo E15.CNhs10603.1252-16G810.17
stomach, embryo E16.CNhs11022.459-17D46.37
stomach, embryo E17.CNhs11006.1035-18D55.65
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B84.05
stomach, neonate N07.CNhs11210.718-18A92.23
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A134.45
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A236.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A341.82
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A424.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.01
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A634.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A726.12
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.02
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.75
whole body, embryo E11.CNhs11014.324-5I861.34
whole body, embryo E12.CNhs10587.857-27C984.99
whole body, embryo E13.CNhs10512.372-23H271.88
whole body, embryo E14.5.CNhs10578.420-27D258.35
whole body, embryo E14.CNhs10519.395-14B177.56
whole body, embryo E16.CNhs10514.453-14F248.35
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G552.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G553.78
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G537.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G547.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G554.24
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G553.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G556.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G554.36
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G554.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G554.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G544.15
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G543.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G544.92
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G557.26
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G551.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G544.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G557.70
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G554.50
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G558.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G550.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G545.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G545.51
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G553.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G549.94
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G537.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G538.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G532.74
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G547.88
whole body, embryo E17.5.CNhs10513.490-9F935.30
whole body, embryo E17.CNhs10517.475-3I576.19
whole body, embryo E18.CNhs10516.493-3B337.20
whole body, neonate N00.CNhs10525.657-19C241.68
whole body, neonate N01.CNhs10576.659-23C619.70
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.15e-1333
neuronal stem cell2.15e-1333
neuroblast2.15e-1333
electrically signaling cell2.15e-1333
CNS neuron (sensu Vertebrata)4.20e-1323
neuroblast (sensu Vertebrata)4.20e-1323
electrically responsive cell2.86e-0939
electrically active cell2.86e-0939
ectodermal cell8.66e-0844
neurectodermal cell8.66e-0844
neural cell1.03e-0743

Uber anatomy
Ontology termp-valuen
central nervous system1.15e-1873
neurectoderm1.57e-1864
neural plate1.57e-1864
presumptive neural plate1.57e-1864
nervous system1.81e-1775
pre-chordal neural plate1.60e-1649
regional part of nervous system2.03e-1654
ectoderm-derived structure4.05e-1695
ectoderm4.05e-1695
presumptive ectoderm4.05e-1695
neural tube6.12e-1652
neural rod6.12e-1652
future spinal cord6.12e-1652
neural keel6.12e-1652
ecto-epithelium8.82e-1673
gray matter1.11e-1434
anterior neural tube2.75e-1440
regional part of forebrain4.97e-1439
forebrain4.97e-1439
future forebrain4.97e-1439
brain1.05e-1347
future brain1.05e-1347
regional part of brain4.54e-1346
brain grey matter8.01e-1229
regional part of telencephalon8.01e-1229
telencephalon8.01e-1229
structure with developmental contribution from neural crest2.18e-1092
cerebral cortex1.16e-0821
cerebral hemisphere1.16e-0821
pallium1.16e-0821







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