FFCP PHASE1:Mm9::chr18:38761259..38761273,+: Difference between revisions
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|id=chr18:38761259..38761273,+ | |id=chr18:38761259..38761273,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.42e-08!50;CL:0002319!9.83e-08!43;CL:0000221!2.34e-07!44;CL:0000133!2.34e-07!44;CL:0000393!7.59e-07!39;CL:0000211!7.59e-07!39 | |ontology_enrichment_celltype=CL:0000055!4.42e-08!50;CL:0002319!9.83e-08!43;CL:0000221!2.34e-07!44;CL:0000133!2.34e-07!44;CL:0000393!7.59e-07!39;CL:0000211!7.59e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.83e-08,43;CL:0000221,2.32e-07,44;CL:0000133,2.32e-07,44;CL:0000393,6.42e-07,39;CL:0000211,6.42e-07,39;CL:0000540,7.95e-07,33;CL:0000047,7.95e-07,33;CL:0000031,7.95e-07,33;CL:0000404,7.95e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.48e-23!75;UBERON:0001016!9.48e-23!75;UBERON:0001017!1.44e-22!73;UBERON:0005743!1.44e-22!73;UBERON:0004121!7.41e-21!102;UBERON:0000924!7.41e-21!102;UBERON:0006601!7.41e-21!102;UBERON:0002346!5.31e-19!71;UBERON:0003075!5.31e-19!71;UBERON:0007284!5.31e-19!71;UBERON:0001049!1.60e-15!52;UBERON:0005068!1.60e-15!52;UBERON:0006241!1.60e-15!52;UBERON:0007135!1.60e-15!52;UBERON:0000033!1.37e-14!63;UBERON:0000955!4.39e-14!50;UBERON:0006238!4.39e-14!50;UBERON:0002616!1.78e-13!49;UBERON:0003056!2.40e-11!49;UBERON:0003080!6.64e-10!40;UBERON:0002780!2.61e-09!39;UBERON:0001890!2.61e-09!39;UBERON:0006240!2.61e-09!39;UBERON:0000468!3.08e-09!333;UBERON:0002020!9.43e-09!34;UBERON:0000025!1.57e-08!114;UBERON:0004111!1.09e-07!122;UBERON:0000922!3.17e-07!328;UBERON:0002021!3.19e-07!10;UBERON:0000411!3.19e-07!10;UBERON:0001950!3.19e-07!10;UBERON:0003076!5.83e-07!12;UBERON:0003057!5.83e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!9.48e-23!75;UBERON:0001016!9.48e-23!75;UBERON:0001017!1.44e-22!73;UBERON:0005743!1.44e-22!73;UBERON:0004121!7.41e-21!102;UBERON:0000924!7.41e-21!102;UBERON:0006601!7.41e-21!102;UBERON:0002346!5.31e-19!71;UBERON:0003075!5.31e-19!71;UBERON:0007284!5.31e-19!71;UBERON:0001049!1.60e-15!52;UBERON:0005068!1.60e-15!52;UBERON:0006241!1.60e-15!52;UBERON:0007135!1.60e-15!52;UBERON:0000033!1.37e-14!63;UBERON:0000955!4.39e-14!50;UBERON:0006238!4.39e-14!50;UBERON:0002616!1.78e-13!49;UBERON:0003056!2.40e-11!49;UBERON:0003080!6.64e-10!40;UBERON:0002780!2.61e-09!39;UBERON:0001890!2.61e-09!39;UBERON:0006240!2.61e-09!39;UBERON:0000468!3.08e-09!333;UBERON:0002020!9.43e-09!34;UBERON:0000025!1.57e-08!114;UBERON:0004111!1.09e-07!122;UBERON:0000922!3.17e-07!328;UBERON:0002021!3.19e-07!10;UBERON:0000411!3.19e-07!10;UBERON:0001950!3.19e-07!10;UBERON:0003076!5.83e-07!12;UBERON:0003057!5.83e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.51e-24,75;UBERON:0001017,4.06e-24,73;UBERON:0002346,5.17e-20,64;UBERON:0003075,5.17e-20,64;UBERON:0007284,5.17e-20,64;UBERON:0004121,2.93e-19,95;UBERON:0000924,2.93e-19,95;UBERON:0006601,2.93e-19,95;UBERON:0000073,3.06e-17,54;UBERON:0001049,1.07e-16,52;UBERON:0005068,1.07e-16,52;UBERON:0006241,1.07e-16,52;UBERON:0007135,1.07e-16,52;UBERON:0010314,1.01e-15,92;UBERON:0010371,2.50e-15,73;UBERON:0000955,7.28e-14,47;UBERON:0006238,7.28e-14,47;UBERON:0002616,3.31e-13,46;UBERON:0003056,4.30e-12,49;UBERON:0003080,1.77e-10,40;UBERON:0002780,8.00e-10,39;UBERON:0001890,8.00e-10,39;UBERON:0006240,8.00e-10,39;UBERON:0002020,3.43e-09,34;UBERON:0002021,6.80e-08,10;UBERON:0000411,6.80e-08,10;UBERON:0001950,6.80e-08,10;UBERON:0003076,1.33e-07,12;UBERON:0003057,1.33e-07,12;UBERON:0000025,7.04e-07,114;UBERON:0003528,8.95e-07,29;UBERON:0002791,8.95e-07,29;UBERON:0001893,8.95e-07,29 | |||
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| ||
|short_description=p2@Arhgap26 | |short_description=p2@Arhgap26 | ||
}} | }} |
Revision as of 05:51, 15 November 2012
Short description: | p2@Arhgap26 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Arhgap26_5end |
Coexpression cluster: | MCL_coexpression_mm9:361 |
Association with transcript: | 2bp_to_ENSMUST00000127448_5end |
EntrezGene: | Arhgap26 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.83e-08 | 43 |
ectodermal cell | 2.32e-07 | 44 |
neurectodermal cell | 2.32e-07 | 44 |
electrically responsive cell | 6.42e-07 | 39 |
electrically active cell | 6.42e-07 | 39 |
neuron | 7.95e-07 | 33 |
neuronal stem cell | 7.95e-07 | 33 |
neuroblast | 7.95e-07 | 33 |
electrically signaling cell | 7.95e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.51e-24 | 75 |
central nervous system | 4.06e-24 | 73 |
neurectoderm | 5.17e-20 | 64 |
neural plate | 5.17e-20 | 64 |
presumptive neural plate | 5.17e-20 | 64 |
ectoderm-derived structure | 2.93e-19 | 95 |
ectoderm | 2.93e-19 | 95 |
presumptive ectoderm | 2.93e-19 | 95 |
regional part of nervous system | 3.06e-17 | 54 |
neural tube | 1.07e-16 | 52 |
neural rod | 1.07e-16 | 52 |
future spinal cord | 1.07e-16 | 52 |
neural keel | 1.07e-16 | 52 |
structure with developmental contribution from neural crest | 1.01e-15 | 92 |
ecto-epithelium | 2.50e-15 | 73 |
brain | 7.28e-14 | 47 |
future brain | 7.28e-14 | 47 |
regional part of brain | 3.31e-13 | 46 |
pre-chordal neural plate | 4.30e-12 | 49 |
anterior neural tube | 1.77e-10 | 40 |
regional part of forebrain | 8.00e-10 | 39 |
forebrain | 8.00e-10 | 39 |
future forebrain | 8.00e-10 | 39 |
gray matter | 3.43e-09 | 34 |
occipital lobe | 6.80e-08 | 10 |
visual cortex | 6.80e-08 | 10 |
neocortex | 6.80e-08 | 10 |
posterior neural tube | 1.33e-07 | 12 |
chordal neural plate | 1.33e-07 | 12 |
tube | 7.04e-07 | 114 |
brain grey matter | 8.95e-07 | 29 |
regional part of telencephalon | 8.95e-07 | 29 |
telencephalon | 8.95e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.