FFCP PHASE1:Hg19::chr11:48002280..48002296,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!1.34e-13!140;CL:0002087!1.18e-10!119;CL:0000766!2.04e-09!76;CL:0002031!3.35e-09!124;CL:0002009!7.43e-08!65;CL:0000037!8.52e-08!172;CL:0000566!8.52e-08!172;CL:0000988!9.51e-08!182;CL:0000557!1.79e-07!71;CL:0000791!1.84e-07!18;CL:0000789!1.84e-07!18;CL:0002420!1.84e-07!18;CL:0002419!1.84e-07!18;CL:0000790!1.84e-07!18;CL:0002194!2.08e-07!63;CL:0000576!2.08e-07!63;CL:0000040!2.08e-07!63;CL:0000559!2.08e-07!63;CL:0002032!4.67e-07!165;CL:0000837!4.67e-07!165 | |ontology_enrichment_celltype=CL:0000738!1.34e-13!140;CL:0002087!1.18e-10!119;CL:0000766!2.04e-09!76;CL:0002031!3.35e-09!124;CL:0002009!7.43e-08!65;CL:0000037!8.52e-08!172;CL:0000566!8.52e-08!172;CL:0000988!9.51e-08!182;CL:0000557!1.79e-07!71;CL:0000791!1.84e-07!18;CL:0000789!1.84e-07!18;CL:0002420!1.84e-07!18;CL:0002419!1.84e-07!18;CL:0000790!1.84e-07!18;CL:0002194!2.08e-07!63;CL:0000576!2.08e-07!63;CL:0000040!2.08e-07!63;CL:0000559!2.08e-07!63;CL:0002032!4.67e-07!165;CL:0000837!4.67e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.81e-10;18!CL:0000789;6.81e-10;18!CL:0002419;6.81e-10;18 | |ontology_enrichment_celltype_v019=CL:0000791;6.81e-10;18!CL:0000789;6.81e-10;18!CL:0002419;6.81e-10;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.15e-12,136;CL:0000791,2.96e-10,18;CL:0000789,2.96e-10,18;CL:0002420,2.96e-10,18;CL:0002419,2.96e-10,18;CL:0000790,2.96e-10,18;CL:0002087,9.52e-10,115;CL:0002031,1.92e-08,120;CL:0000037,4.23e-08,168;CL:0000988,4.97e-08,177;CL:0000084,6.81e-07,25;CL:0000827,6.81e-07,25;CL:0002032,8.85e-07,161;CL:0000837,8.85e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;6.81e-10;18 | |ontology_enrichment_development_v019=CL:0000790;6.81e-10;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!5.86e-12!59;UBERON:0000955!1.79e-11!69;UBERON:0006238!1.79e-11!69;UBERON:0001049!3.81e-11!57;UBERON:0005068!3.81e-11!57;UBERON:0006241!3.81e-11!57;UBERON:0007135!3.81e-11!57;UBERON:0002780!1.41e-10!41;UBERON:0001890!1.41e-10!41;UBERON:0006240!1.41e-10!41;UBERON:0003080!1.50e-10!42;UBERON:0003075!4.15e-10!86;UBERON:0007284!4.15e-10!86;UBERON:0002390!8.82e-10!102;UBERON:0003061!8.82e-10!102;UBERON:0002020!1.08e-09!34;UBERON:0003528!1.08e-09!34;UBERON:0001017!1.68e-09!82;UBERON:0001893!2.54e-09!34;UBERON:0003056!3.46e-09!61;UBERON:0002791!4.28e-09!33;UBERON:0005743!5.40e-09!86;UBERON:0001869!5.53e-09!32;UBERON:0002346!2.23e-08!90;UBERON:0002193!6.23e-08!112;UBERON:0000956!1.09e-07!25;UBERON:0000203!1.09e-07!25;UBERON:0000073!1.13e-07!94;UBERON:0001016!1.13e-07!94;UBERON:0007023!1.23e-07!115 | |ontology_enrichment_uberon=UBERON:0002616!5.86e-12!59;UBERON:0000955!1.79e-11!69;UBERON:0006238!1.79e-11!69;UBERON:0001049!3.81e-11!57;UBERON:0005068!3.81e-11!57;UBERON:0006241!3.81e-11!57;UBERON:0007135!3.81e-11!57;UBERON:0002780!1.41e-10!41;UBERON:0001890!1.41e-10!41;UBERON:0006240!1.41e-10!41;UBERON:0003080!1.50e-10!42;UBERON:0003075!4.15e-10!86;UBERON:0007284!4.15e-10!86;UBERON:0002390!8.82e-10!102;UBERON:0003061!8.82e-10!102;UBERON:0002020!1.08e-09!34;UBERON:0003528!1.08e-09!34;UBERON:0001017!1.68e-09!82;UBERON:0001893!2.54e-09!34;UBERON:0003056!3.46e-09!61;UBERON:0002791!4.28e-09!33;UBERON:0005743!5.40e-09!86;UBERON:0001869!5.53e-09!32;UBERON:0002346!2.23e-08!90;UBERON:0002193!6.23e-08!112;UBERON:0000956!1.09e-07!25;UBERON:0000203!1.09e-07!25;UBERON:0000073!1.13e-07!94;UBERON:0001016!1.13e-07!94;UBERON:0007023!1.23e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.32e-10;34!UBERON:0002020;2.32e-10;34!UBERON:0001893;3.18e-10;34!UBERON:0001869;5.88e-10;32!UBERON:0002780;7.57e-10;41!UBERON:0001890;7.57e-10;41!UBERON:0002791;8.24e-10;32!UBERON:0000956;9.66e-10;25!UBERON:0000203;9.66e-10;25!UBERON:0000073;1.08e-09;53!UBERON:0002616;1.08e-09;53!UBERON:0002619;5.97e-08;22!UBERON:0001950;7.04e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0003528;2.32e-10;34!UBERON:0002020;2.32e-10;34!UBERON:0001893;3.18e-10;34!UBERON:0001869;5.88e-10;32!UBERON:0002780;7.57e-10;41!UBERON:0001890;7.57e-10;41!UBERON:0002791;8.24e-10;32!UBERON:0000956;9.66e-10;25!UBERON:0000203;9.66e-10;25!UBERON:0000073;1.08e-09;53!UBERON:0002616;1.08e-09;53!UBERON:0002619;5.97e-08;22!UBERON:0001950;7.04e-07;20 | ||
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|phase1_expression=0.363356758541113,0.214100523890983,0.704772020479856,2.00146596706261,0,1.74467704820074,0,0,0,0.737201809504527,2.09340350391728,0,0,0.866364470720326,1.32558950291166,0,0,0,0,2.09305798730539,4.28401451612931,1.25381888591235,2.0036519099174,2.18999080116615,1.50651167513763,0.0764134057479513,0,0.0787107813136792,0.786728553697808,3.0706351847777,0.77408061658038,0,0,0,0.154934401160603,0,0,1.10799081706375,1.80490002723128,2.82114131930607,1.34349284543955,1.6194683300949,1.03030227053675,0.726991193897824,0.377875943688809,0.485168122375632,1.62700325833979,0.822335776043652,0.619412741790207,1.43846196161075,1.2808035326455,0.945928919554341,1.72372840368309,1.29096936716765,0,0.941211697713023,0.272906150057846,1.12361742222542,1.53041946185451,0.962787081228281,0,0.659702600373432,0.797854630486527,0.852449501065388,2.03146467040009,1.70215567407342,1.24564449799115,1.00499466102697,0.521482918420201,0.434377689410233,3.02699751316684,1.47311054395026,1.89877432464531,1.05627643155971,0.637812899895131,1.04829322754188,0.561643155732475,0.600707571366025,0.803627933485401,0,0.99458338599545,0.547992461293902,1.75996244461323,1.63841583378639,0,0.853460445133014,0.400395987036012,1.14950487990897,1.32208974556972,0.954053754535364,0.569212969109448,1.17447437874188,0.764546456250458,0,2.24203425192614,0,1.37696839079683,1.96505381374582,2.05601498999509,1.33749196312542,1.62961133316795,2.36723902867367,0,2.33961959458865,3.24066498222321,0.886135578334485,1.89562704635511,1.92136979588513,1.30059347559878,1.31550323682941,2.76350017785848,3.47763702882063,0.889719378972363,1.33770414044857,0,2.26618685395132,2.29932296161153,1.37450978193052,2.02415753615602,3.50421955756506,1.95325036156926,0,0.903450714466637,2.04778577847069,1.24930726552346,2.60454977248419,1.64225599384209,2.82249440514625,2.40696176205157,2.17236605824198,0,0.670700859703636,0.639312809217652,0.722878304769133,0.50133791063589,0.289693037921647,0,0.486634870302636,5.2939497611878,4.65631734671384,4.21606971327005,1.0478326039817,0,0,2.92092654289215,2.43781632218974,3.0580330919339,2.38490624305342,4.0039643754609,2.22874500797739,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0.337834441449967,0,0,0,3.9534125230819,3.87780264148325,0,0.496971951695318,0.633152558322899,0.794455084879313,1.72101972449288,0,0,3.20246987189115,0.24666754841716,0.311211035399766,0.538842688278752,0,1.05950199351452,0,0,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0,1.18800285728205,0.247266929278557,0.910161361938026,0,0,0,0,0.877955241761676,0.30648779579902,0.300476117813194,0.340296549480063,1.07633781413317,0.85422955527427,0.635795703478686,1.50045548042201,0.206105058476878,0.257640540045629,0.37223371266318,0.337552664482532,0.292311015483596,0.504867548488229,0.552299391853796,0.323292113637624,0.710019185033229,0.403008392910561,0.67824236924195,0.193260853163297,0,0,0.365921118388786,0.265059536642971,0,0.207322110030741,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0.168584690078102,0,0.220587945464788,0.435758888184812,0,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0.8231480226628,0,0,0.982827216677626,1.18157981336281,0,0,3.94605963686609,0,0,0,0,0,0,4.3299402607582,4.63721619900307,3.40485213283883,0,0,0,0,0,0.984868024349589,1.17002132569619,1.63494278517601,0,0.16798212819886,0,0,0,0.383382679165211,0,0.176096868026452,1.4512968087854,0.288239906833923,0.6312121671319,0.571481048629521,1.14596527667483,1.17217447210047,0,0.411309970813294,1.20137223137567,0.857479297891735,0.897048674762886,1.30788020649984,0.51336800074665,1.03417372606222,0,0,0.531876233169741,1.04007436911366,0.514414748524284,0,0,1.14382394926518,0,0,0,0,0,3.31583314765545,1.74306691720059,3.39908170018994,0,2.51128545716063,0,0.479249710983165,1.14861935834114,1.42636905040718,0.289562613335158,0.410952645100767,0,1.00876629594175,3.15249216323084,2.58753089831421,3.7219480521127,0.76228387266739,1.30139853857622,0.773288812777695,0.502548796003046,0,2.99602809578873,5.9832291840805,3.31532410748828,0.49076596687656,1.00034104211935,0,0.623912584592421,0.178428988797162,0.946214490203608,0.819989904948992,0,0,0,0.664225598535437,0,0.173767228936166,0,0.343143423810856,2.06768026122887,1.2942852049117,2.45473382947922,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0.384417447767103,0,0.64341568457443,1.48418066444991,0.308419387605311,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0.601519410909855,0,0.229628896329213,0.364182336013434,0.655622074797121,0.451199612907412,1.23224539367064,1.56869953835371,2.92278449306521,2.32213583564327,2.27466768141793,0,1.51141141271498,0,3.25135725052623,1.50506932156456,2.03901018436031,1.66215201785745,1.56712328305525,0.219259876645935,0,0,0.656029291399411,0,0.721287081534056,0.183138929636687,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0,0.426133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| ||
|short_description=p3@PTPRJ | |short_description=p3@PTPRJ | ||
}} | }} |
Revision as of 23:55, 15 November 2012
Short description: | p3@PTPRJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PTPRJ_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000527952, ENST00000534219_5end |
EntrezGene: | PTPRJ |
HGNC: | 9673 |
UniProt: | E9PJ83E9PPH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.15e-12 | 136 |
mature alpha-beta T cell | 2.96e-10 | 18 |
alpha-beta T cell | 2.96e-10 | 18 |
immature T cell | 2.96e-10 | 18 |
mature T cell | 2.96e-10 | 18 |
immature alpha-beta T cell | 2.96e-10 | 18 |
nongranular leukocyte | 9.52e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.92e-08 | 120 |
hematopoietic stem cell | 4.23e-08 | 168 |
hematopoietic cell | 4.97e-08 | 177 |
T cell | 6.81e-07 | 25 |
pro-T cell | 6.81e-07 | 25 |
hematopoietic oligopotent progenitor cell | 8.85e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.85e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.29e-15 | 53 |
regional part of brain | 2.29e-15 | 53 |
pre-chordal neural plate | 5.66e-14 | 61 |
neural tube | 7.44e-14 | 56 |
neural rod | 7.44e-14 | 56 |
future spinal cord | 7.44e-14 | 56 |
neural keel | 7.44e-14 | 56 |
neural plate | 8.26e-14 | 82 |
presumptive neural plate | 8.26e-14 | 82 |
brain | 8.84e-13 | 68 |
future brain | 8.84e-13 | 68 |
regional part of forebrain | 1.14e-12 | 41 |
forebrain | 1.14e-12 | 41 |
anterior neural tube | 1.14e-12 | 41 |
future forebrain | 1.14e-12 | 41 |
neurectoderm | 1.94e-12 | 86 |
brain grey matter | 6.54e-12 | 34 |
gray matter | 6.54e-12 | 34 |
telencephalon | 2.15e-11 | 34 |
cerebral hemisphere | 7.16e-11 | 32 |
regional part of telencephalon | 7.80e-11 | 32 |
ecto-epithelium | 3.92e-10 | 104 |
cerebral cortex | 6.46e-10 | 25 |
pallium | 6.46e-10 | 25 |
central nervous system | 9.12e-10 | 81 |
structure with developmental contribution from neural crest | 3.13e-09 | 132 |
nervous system | 3.01e-08 | 89 |
regional part of cerebral cortex | 3.51e-08 | 22 |
hematopoietic system | 9.35e-08 | 98 |
blood island | 9.35e-08 | 98 |
excretory tube | 3.64e-07 | 16 |
kidney epithelium | 3.64e-07 | 16 |
neocortex | 5.19e-07 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.