FFCP PHASE1:Hg19::chr12:9067123..9067159,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000197!2.40e-08!6;CL:0000098!2.40e-08!6;CL:0002167!2.40e-08!6;CL:0002057!5.99e-08!42;CL:0000860!4.06e-07!45 | |ontology_enrichment_celltype=CL:0000197!2.40e-08!6;CL:0000098!2.40e-08!6;CL:0002167!2.40e-08!6;CL:0002057!5.99e-08!42;CL:0000860!4.06e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.93e-16;5!CL:0000540;5.44e-15;6!CL:0000404;5.44e-15;6!CL:0000163;4.25e-09;9!CL:0000228;8.20e-07;1!CL:0002372;8.20e-07;1 | |ontology_enrichment_celltype_v019=CL:0000097;2.93e-16;5!CL:0000540;5.44e-15;6!CL:0000404;5.44e-15;6!CL:0000163;4.25e-09;9!CL:0000228;8.20e-07;1!CL:0002372;8.20e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.94e-16,5;CL:0002028,2.94e-16,5;CL:0000540,5.37e-15,6;CL:0000031,5.37e-15,6;CL:0000404,5.37e-15,6;CL:0000047,2.87e-11,8;CL:0000163,4.25e-09,9;CL:0000228,8.21e-07,1;CL:0002372,8.21e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000031;5.44e-15;6 | |ontology_enrichment_development_v019=CL:0000031;5.44e-15;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;7.23e-08;34!UBERON:0002020;7.23e-08;34!UBERON:0002619;1.46e-07;22!UBERON:0000073;1.51e-07;53!UBERON:0002616;1.51e-07;53!UBERON:0001894;2.60e-07;7!UBERON:0002780;3.51e-07;41!UBERON:0001890;3.51e-07;41!UBERON:0001869;8.28e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0003528;7.23e-08;34!UBERON:0002020;7.23e-08;34!UBERON:0002619;1.46e-07;22!UBERON:0000073;1.51e-07;53!UBERON:0002616;1.51e-07;53!UBERON:0001894;2.60e-07;7!UBERON:0002780;3.51e-07;41!UBERON:0001890;3.51e-07;41!UBERON:0001869;8.28e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.33e-14,81;UBERON:0001016,1.67e-14,89;UBERON:0000073,1.28e-13,53;UBERON:0002616,1.28e-13,53;UBERON:0001049,9.27e-13,56;UBERON:0005068,9.27e-13,56;UBERON:0006241,9.27e-13,56;UBERON:0007135,9.27e-13,56;UBERON:0003075,2.27e-12,82;UBERON:0007284,2.27e-12,82;UBERON:0002346,1.21e-11,86;UBERON:0003056,2.78e-11,61;UBERON:0002780,1.37e-10,41;UBERON:0001890,1.37e-10,41;UBERON:0003080,1.37e-10,41;UBERON:0006240,1.37e-10,41;UBERON:0000955,6.76e-10,68;UBERON:0006238,6.76e-10,68;UBERON:0010371,4.51e-09,104;UBERON:0003528,2.84e-08,34;UBERON:0002020,2.84e-08,34;UBERON:0002619,1.31e-07,22;UBERON:0004121,1.44e-07,171;UBERON:0000924,1.44e-07,171;UBERON:0006601,1.44e-07,171;UBERON:0001894,2.52e-07,7;UBERON:0006222,2.52e-07,7;UBERON:0002791,7.55e-07,32;UBERON:0001869,7.55e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755751887377619,0.485168122375632,0.697287110717054,0.411167888021826,0.929119112685311,0.575384784644301,0,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0.818718450173537,0.898893937780338,0,0,0,0,0,0,0,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0,0,0.949387162322653,0,0,0,0,0.150176892841506,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0,0,0.400395987036012,0,0.661044872784862,0.954053754535364,0,0,0.382273228125229,1.32171328579026,2.24203425192614,1.58030450865046,0,0,0,0.668745981562712,0,0.946895611469467,0,0.111410456885174,0.883817722424512,0.664601683750863,1.89562704635511,0.128091319725675,0.650296737799391,0.493313713811028,0.829050053357545,0.869409257205157,0.296573126324121,0.802622484269139,0,0.906474741580529,0,0,0.506039384039006,0.637130828648193,0,0.950452044448374,0.301150238155546,0.76791966692651,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,1.2931684545505,0,0,0,0,0,0,0,0,0.116193942869518,0,11.3544382894033,6.20461510428911,0,0,0,0,0,0,0,0,0,0.435758888184812,0,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,1.04337364477569,1.05667824812239,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,1.32072651019839,1.4512968087854,1.44119953416961,1.64115163454294,0.571481048629521,0,0,0,0,0,1.71495859578347,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27910715122155,0,0,0,0,0,0,0,0,0,0,0,2.55175500661265,0,0,0,0,0,0,0.207970861530807,0.892144943985809,0.315404830067869,0.585707074963566,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.88424136911809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,5.01268954180134,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0,0,0,0,0,0.890894042497916,0,2.98244294329889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,4.5774520895125,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,0,10.4489546502262,13.6164042231261,16.2021731831382,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,1.77213635993397,1.22026264901963,0,2.29363678276028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0.829412415681711,0,0,0,0.380805212168795,0,0,0,0.464033759878494,1.59238355479446,0,1.03018711554838,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.389720617678777,0,1.30852315404675,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,2.8339315265117,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56215619722769,0,0,0,0,0,0,0,2.14280734351315,0,4.24875922965642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981542335574726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,1.65833887891756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755751887377619,0.485168122375632,0.697287110717054,0.411167888021826,0.929119112685311,0.575384784644301,0,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0.818718450173537,0.898893937780338,0,0,0,0,0,0,0,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0,0,0.949387162322653,0,0,0,0,0.150176892841506,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0,0,0.400395987036012,0,0.661044872784862,0.954053754535364,0,0,0.382273228125229,1.32171328579026,2.24203425192614,1.58030450865046,0,0,0,0.668745981562712,0,0.946895611469467,0,0.111410456885174,0.883817722424512,0.664601683750863,1.89562704635511,0.128091319725675,0.650296737799391,0.493313713811028,0.829050053357545,0.869409257205157,0.296573126324121,0.802622484269139,0,0.906474741580529,0,0,0.506039384039006,0.637130828648193,0,0.950452044448374,0.301150238155546,0.76791966692651,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,1.2931684545505,0,0,0,0,0,0,0,0,0.116193942869518,0,11.3544382894033,6.20461510428911,0,0,0,0,0,0,0,0,0,0.435758888184812,0,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,1.04337364477569,1.05667824812239,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,1.32072651019839,1.4512968087854,1.44119953416961,1.64115163454294,0.571481048629521,0,0,0,0,0,1.71495859578347,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27910715122155,0,0,0,0,0,0,0,0,0,0,0,2.55175500661265,0,0,0,0,0,0,0.207970861530807,0.892144943985809,0.315404830067869,0.585707074963566,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.88424136911809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,5.01268954180134,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0,0,0,0,0,0.890894042497916,0,2.98244294329889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,4.5774520895125,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,0,10.4489546502262,13.6164042231261,16.2021731831382,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,1.77213635993397,1.22026264901963,0,2.29363678276028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0.829412415681711,0,0,0,0.380805212168795,0,0,0,0.464033759878494,1.59238355479446,0,1.03018711554838,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.389720617678777,0,1.30852315404675,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,2.8339315265117,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56215619722769,0,0,0,0,0,0,0,2.14280734351315,0,4.24875922965642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981542335574726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,1.65833887891756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p4@PHC1 | |short_description=p4@PHC1 | ||
}} | }} |
Revision as of 22:17, 17 November 2012
Short description: | p4@PHC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PHC1_5end |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | 0bp_to_ENST00000543824_5end |
EntrezGene: | PHC1 |
HGNC: | 3182 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.94e-16 | 5 |
basophil mast progenitor cell | 2.94e-16 | 5 |
neuron | 5.37e-15 | 6 |
neuroblast | 5.37e-15 | 6 |
electrically signaling cell | 5.37e-15 | 6 |
neuronal stem cell | 2.87e-11 | 8 |
endocrine cell | 4.25e-09 | 9 |
multinucleate cell | 8.21e-07 | 1 |
myotube | 8.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.33e-14 | 81 |
nervous system | 1.67e-14 | 89 |
regional part of nervous system | 1.28e-13 | 53 |
regional part of brain | 1.28e-13 | 53 |
neural tube | 9.27e-13 | 56 |
neural rod | 9.27e-13 | 56 |
future spinal cord | 9.27e-13 | 56 |
neural keel | 9.27e-13 | 56 |
neural plate | 2.27e-12 | 82 |
presumptive neural plate | 2.27e-12 | 82 |
neurectoderm | 1.21e-11 | 86 |
pre-chordal neural plate | 2.78e-11 | 61 |
regional part of forebrain | 1.37e-10 | 41 |
forebrain | 1.37e-10 | 41 |
anterior neural tube | 1.37e-10 | 41 |
future forebrain | 1.37e-10 | 41 |
brain | 6.76e-10 | 68 |
future brain | 6.76e-10 | 68 |
ecto-epithelium | 4.51e-09 | 104 |
brain grey matter | 2.84e-08 | 34 |
gray matter | 2.84e-08 | 34 |
regional part of cerebral cortex | 1.31e-07 | 22 |
ectoderm-derived structure | 1.44e-07 | 171 |
ectoderm | 1.44e-07 | 171 |
presumptive ectoderm | 1.44e-07 | 171 |
diencephalon | 2.52e-07 | 7 |
future diencephalon | 2.52e-07 | 7 |
regional part of telencephalon | 7.55e-07 | 32 |
cerebral hemisphere | 7.55e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.