FFCP PHASE1:Hg19::chr15:34629880..34629913,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!5.76e-23!140;CL:0002057!1.20e-20!42;CL:0002087!2.44e-20!119;CL:0002031!6.55e-19!124;CL:0000860!8.83e-19!45;CL:0000037!1.28e-18!172;CL:0000566!1.28e-18!172;CL:0000988!8.20e-17!182;CL:0002032!1.03e-16!165;CL:0000837!1.03e-16!165;CL:0000766!5.22e-15!76;CL:0002009!6.19e-13!65;CL:0002194!3.64e-12!63;CL:0000576!3.64e-12!63;CL:0000040!3.64e-12!63;CL:0000559!3.64e-12!63;CL:0000557!1.57e-11!71;CL:0000839!2.22e-11!70;CL:0000763!9.96e-10!112;CL:0000049!9.96e-10!112;CL:0000542!1.81e-07!53;CL:0000051!1.81e-07!53;CL:0000838!2.26e-07!52 | |ontology_enrichment_celltype=CL:0000738!5.76e-23!140;CL:0002057!1.20e-20!42;CL:0002087!2.44e-20!119;CL:0002031!6.55e-19!124;CL:0000860!8.83e-19!45;CL:0000037!1.28e-18!172;CL:0000566!1.28e-18!172;CL:0000988!8.20e-17!182;CL:0002032!1.03e-16!165;CL:0000837!1.03e-16!165;CL:0000766!5.22e-15!76;CL:0002009!6.19e-13!65;CL:0002194!3.64e-12!63;CL:0000576!3.64e-12!63;CL:0000040!3.64e-12!63;CL:0000559!3.64e-12!63;CL:0000557!1.57e-11!71;CL:0000839!2.22e-11!70;CL:0000763!9.96e-10!112;CL:0000049!9.96e-10!112;CL:0000542!1.81e-07!53;CL:0000051!1.81e-07!53;CL:0000838!2.26e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-24;33!CL:0002057;1.60e-24;33!CL:0000473;3.90e-16;39!CL:0000234;3.90e-16;39!CL:0000576;5.81e-14;48!CL:0002087;2.44e-10;104!CL:0000766;6.76e-10;69!CL:0000236;6.68e-09;13!CL:0000094;2.21e-08;8!CL:0000081;3.08e-08;11!CL:0000738;3.32e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;1.60e-24;33!CL:0002057;1.60e-24;33!CL:0000473;3.90e-16;39!CL:0000234;3.90e-16;39!CL:0000576;5.81e-14;48!CL:0002087;2.44e-10;104!CL:0000766;6.76e-10;69!CL:0000236;6.68e-09;13!CL:0000094;2.21e-08;8!CL:0000081;3.08e-08;11!CL:0000738;3.32e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.94e-29,136;CL:0000860,1.00e-27,42;CL:0002057,1.00e-27,42;CL:0002087,4.62e-25,115;CL:0000473,2.34e-22,48;CL:0000234,2.34e-22,48;CL:0000037,4.64e-22,168;CL:0002031,1.02e-21,120;CL:0000988,7.81e-21,177;CL:0000766,2.02e-19,72;CL:0002032,4.36e-19,161;CL:0000837,4.36e-19,161;CL:0002009,1.87e-17,61;CL:0002194,2.79e-16,59;CL:0000576,2.79e-16,59;CL:0000040,2.79e-16,59;CL:0000559,2.79e-16,59;CL:0000557,1.27e-14,67;CL:0000839,3.83e-13,66;CL:0000763,1.40e-11,108;CL:0000049,1.40e-11,108;CL:0000236,1.58e-09,14;CL:0000094,1.69e-08,8;CL:0000081,3.28e-08,11;CL:0000838,4.65e-08,52;CL:0000542,9.54e-08,53;CL:0000051,9.54e-08,53 | |||
|ontology_enrichment_development_v019=CL:0002057;3.37e-20;42 | |ontology_enrichment_development_v019=CL:0002057;3.37e-20;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.48e-22!115;UBERON:0002390!6.16e-16!102;UBERON:0003061!6.16e-16!102;UBERON:0002193!8.45e-16!112;UBERON:0002371!2.76e-10!80;UBERON:0001474!1.59e-09!86;UBERON:0001049!1.01e-08!57;UBERON:0005068!1.01e-08!57;UBERON:0006241!1.01e-08!57;UBERON:0007135!1.01e-08!57;UBERON:0004765!7.44e-08!101;UBERON:0001434!7.44e-08!101;UBERON:0002405!9.13e-08!115;UBERON:0002780!2.10e-07!41;UBERON:0001890!2.10e-07!41;UBERON:0006240!2.10e-07!41;UBERON:0003081!3.87e-07!216;UBERON:0002616!5.87e-07!59;UBERON:0003080!6.94e-07!42 | |ontology_enrichment_uberon=UBERON:0007023!2.48e-22!115;UBERON:0002390!6.16e-16!102;UBERON:0003061!6.16e-16!102;UBERON:0002193!8.45e-16!112;UBERON:0002371!2.76e-10!80;UBERON:0001474!1.59e-09!86;UBERON:0001049!1.01e-08!57;UBERON:0005068!1.01e-08!57;UBERON:0006241!1.01e-08!57;UBERON:0007135!1.01e-08!57;UBERON:0004765!7.44e-08!101;UBERON:0001434!7.44e-08!101;UBERON:0002405!9.13e-08!115;UBERON:0002780!2.10e-07!41;UBERON:0001890!2.10e-07!41;UBERON:0006240!2.10e-07!41;UBERON:0003081!3.87e-07!216;UBERON:0002616!5.87e-07!59;UBERON:0003080!6.94e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.67e-10;15!UBERON:0000179;4.67e-10;15!UBERON:0000463;4.67e-10;15!UBERON:0000073;2.59e-07;53!UBERON:0002616;2.59e-07;53!UBERON:0001893;4.68e-07;34!UBERON:0002780;4.89e-07;41!UBERON:0001890;4.89e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.67e-10;15!UBERON:0000179;4.67e-10;15!UBERON:0000463;4.67e-10;15!UBERON:0000073;2.59e-07;53!UBERON:0002616;2.59e-07;53!UBERON:0001893;4.68e-07;34!UBERON:0002780;4.89e-07;41!UBERON:0001890;4.89e-07;41 | ||
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|phase1_expression=0.726713517082227,0.214100523890983,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.618831764800233,1.32558950291166,0,0.602694528023977,0,1.46379839637152,0.123121058076788,0,0,0,0,0,1.06978768047132,0.656804715599566,0.550975469195755,1.57345710739562,1.53531759238885,2.47705797305722,0,0,0,0.309868802321207,1.27952309238679,1.17440175733939,4.9859586767869,7.82123345133553,5.64228263861215,0.895661896959697,0.647787332037959,0.257575567634187,6.39752250630085,5.29026321164333,7.03493777444667,2.09186133215116,2.05583944010913,2.78735733805593,2.01384674625505,1.7931249457037,3.78371567821736,4.82643953031266,3.22742341791913,8.12558919566051,2.63539275359647,3.27487380069415,3.37085226667627,1.53041946185451,2.24650318953266,4.47535988059329,4.94776950280074,4.18873681005427,4.26224750532694,3.48251086354301,2.8369261234557,1.24564449799115,3.51748131359441,1.5644487552606,3.25783267057675,3.02699751316684,1.84138817993782,2.21523671208619,0.845021145247767,1.4882300997553,0.838634582033504,4.4931452458598,3.60424542819615,3.53596290733576,1.42506371870624,1.19350006319454,0.91332076882317,1.75996244461323,4.36910889009705,1.77901850772711,6.40095333849761,1.20118796110804,4.02326707968138,4.62731410949403,3.81621501814146,2.27685187643779,3.52342313622563,3.05818582500183,6.60856642895129,7.8471198817415,2.10707267820062,3.73748563216283,2.35806457649499,2.2616164889946,2.67498392625085,1.30368906653436,0.473447805734733,1.94826728407911,1.44833593950726,3.82987679717288,0.664601683750863,4.33286182024025,0.768547918354051,2.60118695119756,0.657751618414705,0.829050053357545,1.44901542867526,0.444859689486181,1.07016331235885,0,1.13309342697566,0.766440987203842,0.68725489096526,1.77113784413652,0.637130828648193,0,0,1.6563263098555,1.79181255616186,0,2.60454977248419,0.821127996921047,0.604820229674197,1.06976078313403,2.17236605824198,0,0,0.255725123687061,0.722878304769133,0.50133791063589,0,1.5905718941022,0.486634870302636,0,0,0.175669571386252,1.5062593682237,0,0,0.324547393654683,0.870648686496336,0.132957960518865,4.76981248610684,4.57595928624102,2.97166001063652,0.596287222100115,0,1.73570250803797,0,1.67799774483962,0.550236083880135,0.626984899610432,1.03366703667732,0.71153252537342,1.33888245105868,2.01414658554573,0.760272105718513,1.70843440283719,0,0,0.714397826272638,0.673588117878509,0.675668882899933,0,1.89853131913626,1.09921046358244,288.599114184979,240.423763771962,0.436094052142534,1.49091585508596,0.633152558322899,0.926864265692532,0.573673241497627,0,0,0,0.49333509683432,0,1.61652806483626,0.163461903113459,1.05950199351452,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0.741800787835671,0,0,0,0,0.277064115484183,0,0.30648779579902,1.20190447125277,0,0,0,0,0,0,0.257640540045629,0.37223371266318,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0.710019185033229,0.201504196455281,0.339121184620975,0.193260853163297,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0.414644220061482,0,0.36497735907583,0,0,0,0.464367928031979,0,0.354920400119532,0,0.482022059766964,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0,0,0,0,0.185176890317059,0,0,0,0.231860809950154,0,0.433099343283221,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0.743155811443641,0,0.16798212819886,0,0.0895585227028483,0,0,0.492663237895943,0.264145302039678,0.621984346622316,0,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.22001485746285,0.517086863031111,0,0,0,0,0,0,0.799266537048298,0,1.08524321078289,0,0.65147236858747,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,2.39624855491583,1.14861935834114,0,0.434343920002738,0,0.358121926479791,0.336255431980582,1.18218456121156,2.15627574859517,2.05348858047597,0.76228387266739,0,0,0,0,235.937212543362,161.547187970173,310.397219563591,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.585707074963566,1.20378439891088,0,1.03473071292505,0,0,0,0.587403472388222,0,3.3082884179662,3.8828556147351,3.94891963872744,0,1.66435439510497,0,0.248107807818777,0.153461973288062,0,0.768834895534206,0,1.12597744800525,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0,0.120859449591622,0.200506470303285,0.184161977871793,0.34444334449382,0,1.04899531967539,0,0.231046011313244,0,0,0.527758144464379,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0.657779629937804,0.522870902049801,0.256450125116389,0,0,1.23649213977267,0.0915694648183434,0.165018999841176,0,0,0,0.290012154876366,0,0,0,0.214840489736547,0.145016693914229,0,1.60257664164127,0.165284915360978,0.192190067365106,0.255225424989168,0.30347334256665,0,0.31481234683064,1.3940745403212,0.616067160352178,0.532306030317022,0.869932992075073,0.18532421910392,1.28812398067792,0,0.632758849437452,0.38126038784765,0,0,0.318203247925937,0,0,0,0,0.6065474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| ||
|short_description=p5@SLC12A6 | |short_description=p5@SLC12A6 | ||
}} | }} |
Revision as of 19:49, 18 November 2012
Short description: | p5@SLC12A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SLC12A6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 29bp_to_ENST00000559484_5end |
EntrezGene: | SLC12A6 |
HGNC: | 10914 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.94e-29 | 136 |
classical monocyte | 1.00e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.00e-27 | 42 |
nongranular leukocyte | 4.62e-25 | 115 |
defensive cell | 2.34e-22 | 48 |
phagocyte | 2.34e-22 | 48 |
hematopoietic stem cell | 4.64e-22 | 168 |
hematopoietic lineage restricted progenitor cell | 1.02e-21 | 120 |
hematopoietic cell | 7.81e-21 | 177 |
myeloid leukocyte | 2.02e-19 | 72 |
hematopoietic oligopotent progenitor cell | 4.36e-19 | 161 |
hematopoietic multipotent progenitor cell | 4.36e-19 | 161 |
macrophage dendritic cell progenitor | 1.87e-17 | 61 |
monopoietic cell | 2.79e-16 | 59 |
monocyte | 2.79e-16 | 59 |
monoblast | 2.79e-16 | 59 |
promonocyte | 2.79e-16 | 59 |
granulocyte monocyte progenitor cell | 1.27e-14 | 67 |
myeloid lineage restricted progenitor cell | 3.83e-13 | 66 |
myeloid cell | 1.40e-11 | 108 |
common myeloid progenitor | 1.40e-11 | 108 |
B cell | 1.58e-09 | 14 |
granulocyte | 1.69e-08 | 8 |
blood cell | 3.28e-08 | 11 |
lymphoid lineage restricted progenitor cell | 4.65e-08 | 52 |
lymphocyte | 9.54e-08 | 53 |
common lymphoid progenitor | 9.54e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.10e-19 | 98 |
blood island | 1.10e-19 | 98 |
adult organism | 5.24e-19 | 114 |
hemolymphoid system | 3.20e-18 | 108 |
neural tube | 4.16e-13 | 56 |
neural rod | 4.16e-13 | 56 |
future spinal cord | 4.16e-13 | 56 |
neural keel | 4.16e-13 | 56 |
bone marrow | 1.54e-12 | 76 |
bone element | 1.59e-11 | 82 |
immune system | 1.70e-11 | 93 |
regional part of nervous system | 1.86e-11 | 53 |
regional part of brain | 1.86e-11 | 53 |
blood | 4.15e-10 | 15 |
haemolymphatic fluid | 4.15e-10 | 15 |
organism substance | 4.15e-10 | 15 |
regional part of forebrain | 6.25e-10 | 41 |
forebrain | 6.25e-10 | 41 |
anterior neural tube | 6.25e-10 | 41 |
future forebrain | 6.25e-10 | 41 |
skeletal element | 7.13e-10 | 90 |
lateral plate mesoderm | 2.96e-09 | 203 |
skeletal system | 4.64e-09 | 100 |
neural plate | 2.29e-08 | 82 |
presumptive neural plate | 2.29e-08 | 82 |
telencephalon | 2.72e-08 | 34 |
brain grey matter | 3.01e-08 | 34 |
gray matter | 3.01e-08 | 34 |
brain | 1.30e-07 | 68 |
future brain | 1.30e-07 | 68 |
neurectoderm | 1.84e-07 | 86 |
central nervous system | 4.17e-07 | 81 |
nervous system | 4.51e-07 | 89 |
regional part of telencephalon | 4.55e-07 | 32 |
cerebral hemisphere | 5.68e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.