FFCP PHASE1:Hg19::chr11:117708815..117708831,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:117708815..117708831,+|id=chr11:117708815..117708831,+|ontology_enrichment_celltype=CL:0000128!2.71e-07!7;CL:0000126!2.71e-07!7;CL:0000127!2.71e-07!7;CL:0002453!2.71e-07!7|ontology_enrichment_celltype_v019=CL:0000540;1.06e-10;6!CL:0000404;1.06e-10;6!CL:0002605;8.95e-10;3|ontology_enrichment_celltype_v019_2=CL:0000540,6.46e-11,6;CL:0000031,6.46e-11,6;CL:0000404,6.46e-11,6;CL:0002605,8.97e-10,3;CL:0000047,2.66e-08,8|ontology_enrichment_development_v019=CL:0000031;1.06e-10;6!UBERON:0010227;5.97e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!2.18e-35!86;UBERON:0001049!2.70e-35!57;UBERON:0005068!2.70e-35!57;UBERON:0006241!2.70e-35!57;UBERON:0007135!2.70e-35!57;UBERON:0000073!3.37e-35!94;UBERON:0001016!3.37e-35!94;UBERON:0001017!1.24e-34!82;UBERON:0007023!1.15e-32!115;UBERON:0002346!1.36e-29!90;UBERON:0003075!6.52e-29!86;UBERON:0007284!6.52e-29!86;UBERON:0002616!3.00e-28!59;UBERON:0000955!1.02e-27!69;UBERON:0006238!1.02e-27!69;UBERON:0001893!1.39e-24!34;UBERON:0002020!5.47e-24!34;UBERON:0003528!5.47e-24!34;UBERON:0002780!5.51e-24!41;UBERON:0001890!5.51e-24!41;UBERON:0006240!5.51e-24!41;UBERON:0002791!2.98e-23!33;UBERON:0003080!3.42e-23!42;UBERON:0001869!2.21e-22!32;UBERON:0000956!5.02e-21!25;UBERON:0000203!5.02e-21!25;UBERON:0003056!2.96e-19!61;UBERON:0000924!3.69e-18!173;UBERON:0006601!3.69e-18!173;UBERON:0000153!1.84e-17!129;UBERON:0007811!1.84e-17!129;UBERON:0004121!2.08e-17!169;UBERON:0002619!2.25e-17!22;UBERON:0000033!1.76e-16!123;UBERON:0001950!2.30e-15!20;UBERON:0003076!2.01e-13!15;UBERON:0003057!2.01e-13!15;UBERON:0000922!1.25e-12!612;UBERON:0000062!1.32e-10!511;UBERON:0002050!2.42e-10!605;UBERON:0005423!2.42e-10!605;UBERON:0004733!3.54e-10!12;UBERON:0002028!3.54e-10!12;UBERON:0007277!3.54e-10!12;UBERON:0000923!6.90e-10!604;UBERON:0005291!6.90e-10!604;UBERON:0006598!6.90e-10!604;UBERON:0002532!6.90e-10!604;UBERON:0000468!1.11e-09!659;UBERON:0004732!3.31e-09!13;UBERON:0000025!3.71e-09!194;UBERON:0002680!4.20e-09!9;UBERON:0001895!4.20e-09!9;UBERON:0010092!4.20e-09!9;UBERON:0000467!5.01e-08!625;UBERON:0001872!5.42e-08!5;UBERON:0000480!5.82e-08!626;UBERON:0000064!7.64e-08!219|ontology_enrichment_uberon_v019=UBERON:0000956;1.20e-15;25!UBERON:0000203;1.20e-15;25!UBERON:0001869;8.16e-14;32!UBERON:0001893;8.33e-14;34!UBERON:0001950;2.52e-11;20!UBERON:0002791;2.82e-11;32!UBERON:0003528;5.18e-11;34!UBERON:0002020;5.18e-11;34!UBERON:0002619;2.71e-10;22!UBERON:0002780;2.26e-09;41!UBERON:0001890;2.26e-09;41!UBERON:0002581;2.19e-08;1!UBERON:0002022;2.19e-08;1!UBERON:0002079;5.97e-08;1!UBERON:0007190;5.97e-08;1!UBERON:0001016;1.02e-07;83!UBERON:0000955;1.50e-07;68!UBERON:0000073;3.31e-07;53!UBERON:0002616;3.31e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.14e-20,89;UBERON:0001017,8.01e-18,81;UBERON:0000956,1.30e-15,25;UBERON:0000203,1.30e-15,25;UBERON:0001869,3.22e-15,32;UBERON:0001893,2.88e-14,34;UBERON:0001049,1.89e-12,56;UBERON:0005068,1.89e-12,56;UBERON:0006241,1.89e-12,56;UBERON:0007135,1.89e-12,56;UBERON:0002791,4.66e-12,32;UBERON:0000955,9.31e-12,68;UBERON:0006238,9.31e-12,68;UBERON:0002780,1.19e-11,41;UBERON:0001890,1.19e-11,41;UBERON:0003080,1.19e-11,41;UBERON:0006240,1.19e-11,41;UBERON:0003528,2.65e-11,34;UBERON:0002020,2.65e-11,34;UBERON:0001950,2.72e-11,20;UBERON:0000073,6.91e-11,53;UBERON:0002616,6.91e-11,53;UBERON:0002619,2.91e-10,22;UBERON:0004121,4.36e-09,171;UBERON:0000924,4.36e-09,171;UBERON:0006601,4.36e-09,171;UBERON:0007023,9.47e-09,114;UBERON:0002022,2.52e-08,1;UBERON:0002581,2.71e-08,1;UBERON:0007190,5.05e-08,1;UBERON:0011216,5.07e-08,223;UBERON:0002079,5.40e-08,1;UBERON:0003075,6.19e-08,82;UBERON:0007284,6.19e-08,82;UBERON:0002346,1.76e-07,86;UBERON:0003056,1.96e-07,61|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0.626909442956176,1.14494394852423,0.273748850145768,1.63205431473244,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662648841607426,0.348581828608555,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:117708815..117708831,+ | |||
|id=chr11:117708815..117708831,+ | |||
|ontology_enrichment_celltype=CL:0000128!2.71e-07!7;CL:0000126!2.71e-07!7;CL:0000127!2.71e-07!7;CL:0002453!2.71e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.06e-10;6!CL:0000404;1.06e-10;6!CL:0002605;8.95e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.46e-11,6;CL:0000031,6.46e-11,6;CL:0000404,6.46e-11,6;CL:0002605,8.97e-10,3;CL:0000047,2.66e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.06e-10;6!UBERON:0010227;5.97e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.18e-35!86;UBERON:0001049!2.70e-35!57;UBERON:0005068!2.70e-35!57;UBERON:0006241!2.70e-35!57;UBERON:0007135!2.70e-35!57;UBERON:0000073!3.37e-35!94;UBERON:0001016!3.37e-35!94;UBERON:0001017!1.24e-34!82;UBERON:0007023!1.15e-32!115;UBERON:0002346!1.36e-29!90;UBERON:0003075!6.52e-29!86;UBERON:0007284!6.52e-29!86;UBERON:0002616!3.00e-28!59;UBERON:0000955!1.02e-27!69;UBERON:0006238!1.02e-27!69;UBERON:0001893!1.39e-24!34;UBERON:0002020!5.47e-24!34;UBERON:0003528!5.47e-24!34;UBERON:0002780!5.51e-24!41;UBERON:0001890!5.51e-24!41;UBERON:0006240!5.51e-24!41;UBERON:0002791!2.98e-23!33;UBERON:0003080!3.42e-23!42;UBERON:0001869!2.21e-22!32;UBERON:0000956!5.02e-21!25;UBERON:0000203!5.02e-21!25;UBERON:0003056!2.96e-19!61;UBERON:0000924!3.69e-18!173;UBERON:0006601!3.69e-18!173;UBERON:0000153!1.84e-17!129;UBERON:0007811!1.84e-17!129;UBERON:0004121!2.08e-17!169;UBERON:0002619!2.25e-17!22;UBERON:0000033!1.76e-16!123;UBERON:0001950!2.30e-15!20;UBERON:0003076!2.01e-13!15;UBERON:0003057!2.01e-13!15;UBERON:0000922!1.25e-12!612;UBERON:0000062!1.32e-10!511;UBERON:0002050!2.42e-10!605;UBERON:0005423!2.42e-10!605;UBERON:0004733!3.54e-10!12;UBERON:0002028!3.54e-10!12;UBERON:0007277!3.54e-10!12;UBERON:0000923!6.90e-10!604;UBERON:0005291!6.90e-10!604;UBERON:0006598!6.90e-10!604;UBERON:0002532!6.90e-10!604;UBERON:0000468!1.11e-09!659;UBERON:0004732!3.31e-09!13;UBERON:0000025!3.71e-09!194;UBERON:0002680!4.20e-09!9;UBERON:0001895!4.20e-09!9;UBERON:0010092!4.20e-09!9;UBERON:0000467!5.01e-08!625;UBERON:0001872!5.42e-08!5;UBERON:0000480!5.82e-08!626;UBERON:0000064!7.64e-08!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.20e-15;25!UBERON:0000203;1.20e-15;25!UBERON:0001869;8.16e-14;32!UBERON:0001893;8.33e-14;34!UBERON:0001950;2.52e-11;20!UBERON:0002791;2.82e-11;32!UBERON:0003528;5.18e-11;34!UBERON:0002020;5.18e-11;34!UBERON:0002619;2.71e-10;22!UBERON:0002780;2.26e-09;41!UBERON:0001890;2.26e-09;41!UBERON:0002581;2.19e-08;1!UBERON:0002022;2.19e-08;1!UBERON:0002079;5.97e-08;1!UBERON:0007190;5.97e-08;1!UBERON:0001016;1.02e-07;83!UBERON:0000955;1.50e-07;68!UBERON:0000073;3.31e-07;53!UBERON:0002616;3.31e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.14e-20,89;UBERON:0001017,8.01e-18,81;UBERON:0000956,1.30e-15,25;UBERON:0000203,1.30e-15,25;UBERON:0001869,3.22e-15,32;UBERON:0001893,2.88e-14,34;UBERON:0001049,1.89e-12,56;UBERON:0005068,1.89e-12,56;UBERON:0006241,1.89e-12,56;UBERON:0007135,1.89e-12,56;UBERON:0002791,4.66e-12,32;UBERON:0000955,9.31e-12,68;UBERON:0006238,9.31e-12,68;UBERON:0002780,1.19e-11,41;UBERON:0001890,1.19e-11,41;UBERON:0003080,1.19e-11,41;UBERON:0006240,1.19e-11,41;UBERON:0003528,2.65e-11,34;UBERON:0002020,2.65e-11,34;UBERON:0001950,2.72e-11,20;UBERON:0000073,6.91e-11,53;UBERON:0002616,6.91e-11,53;UBERON:0002619,2.91e-10,22;UBERON:0004121,4.36e-09,171;UBERON:0000924,4.36e-09,171;UBERON:0006601,4.36e-09,171;UBERON:0007023,9.47e-09,114;UBERON:0002022,2.52e-08,1;UBERON:0002581,2.71e-08,1;UBERON:0007190,5.05e-08,1;UBERON:0011216,5.07e-08,223;UBERON:0002079,5.40e-08,1;UBERON:0003075,6.19e-08,82;UBERON:0007284,6.19e-08,82;UBERON:0002346,1.76e-07,86;UBERON:0003056,1.96e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0.626909442956176,1.14494394852423,0.273748850145768,1.63205431473244,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662648841607426,0.348581828608555,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,2.51274398001523,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,1.56869953835371,0,0.105551628892876,1.13733384070897,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0.325378394664303,0,0.183138929636687,0.660075999364704,0,0,0,0.096670718292122,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0,1.94813006139888,1.99613798001194,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,2.36438095162838,0.438770794307945,0,0,1.15425387755696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0,0,0,0.67401132980677,0,0.468528891450678,0,0,0,0,0,2.14250933141343,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,1.58276989889697,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0.470284307407084,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0.415440338029185,0,0,2.12623448303086,0,0.157611414598396,0.209818352539992,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.52893040697076,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.854183854313742,0.1251909307065,0,0.443716206147409,0.372578417648301,0,0,0,0,0,0,0.434763085832475,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,2.15649622793364,0,1.41972529649618,0.169732529954025,0.425149840203366,0,0,0,0,0,0,0,0.706521476061055,0,0.159633859057151,0,0.504143392443436,0.829887029570615,0.645902582527404,0,0,0,0,0,0,0,0,1.20336525358812,0,0,0,0,0,1.48582686160468,0.781078098613847,0.206686796501184,1.20490039368423,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0.475788130837822,2.10472875401117,0,0,1.0989032999072,0.314231179832004,0,0,0,0,0.428859265059938,0.158013611732727,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,1.39265542612958,0,0,0,2.2644426535001,0.0771741581079447,0.655678681511872,0.470317296361523,1.22574160876953,0,0.196308467114945,0.297046400327086,1.6906229103336,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0.286679166302903,0,3.05961705859116,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,1.06090177505535,0.267964130156178,0,0.20686599172379,0.213233981900981,0.23806443146374,0.129177819672012,0,0,0.190941474834495,0.808468755832877,0,0,0,0,0.99798106963804,0,0,0,0,0,0.977931553462932,0.406896178315738,0,0,0 | |||
|short_description=p@chr11:117708815..117708831,+ | |||
}} |
Revision as of 15:57, 10 September 2013
Short description: | p@chr11:117708815..117708831, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:117708815..117708831, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.46e-11 | 6 |
neuroblast | 6.46e-11 | 6 |
electrically signaling cell | 6.46e-11 | 6 |
astrocyte of the cerebral cortex | 8.97e-10 | 3 |
neuronal stem cell | 2.66e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.14e-20 | 89 |
central nervous system | 8.01e-18 | 81 |
cerebral cortex | 1.30e-15 | 25 |
pallium | 1.30e-15 | 25 |
cerebral hemisphere | 3.22e-15 | 32 |
telencephalon | 2.88e-14 | 34 |
neural tube | 1.89e-12 | 56 |
neural rod | 1.89e-12 | 56 |
future spinal cord | 1.89e-12 | 56 |
neural keel | 1.89e-12 | 56 |
regional part of telencephalon | 4.66e-12 | 32 |
brain | 9.31e-12 | 68 |
future brain | 9.31e-12 | 68 |
regional part of forebrain | 1.19e-11 | 41 |
forebrain | 1.19e-11 | 41 |
anterior neural tube | 1.19e-11 | 41 |
future forebrain | 1.19e-11 | 41 |
brain grey matter | 2.65e-11 | 34 |
gray matter | 2.65e-11 | 34 |
neocortex | 2.72e-11 | 20 |
regional part of nervous system | 6.91e-11 | 53 |
regional part of brain | 6.91e-11 | 53 |
regional part of cerebral cortex | 2.91e-10 | 22 |
ectoderm-derived structure | 4.36e-09 | 171 |
ectoderm | 4.36e-09 | 171 |
presumptive ectoderm | 4.36e-09 | 171 |
adult organism | 9.47e-09 | 114 |
insula | 2.52e-08 | 1 |
postcentral gyrus | 2.71e-08 | 1 |
paracentral gyrus | 5.05e-08 | 1 |
organ system subdivision | 5.07e-08 | 223 |
left cardiac atrium | 5.40e-08 | 1 |
neural plate | 6.19e-08 | 82 |
presumptive neural plate | 6.19e-08 | 82 |
neurectoderm | 1.76e-07 | 86 |
pre-chordal neural plate | 1.96e-07 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.