FFCP PHASE1:Hg19::chr12:7014064..7014075,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10233|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19138|TSSclassifier=S|UniProt=Q53EV4|association_with_transcript=0bp_to_ENST00000443597_5end|description=CAGE_peak_5_at_LRRC23_5end|id=chr12:7014064..7014075,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000623;2.99e-15;3|ontology_enrichment_celltype_v019_2=CL:0000623,1.82e-15,3;CL:0000825,1.82e-15,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!1.48e-19!86;UBERON:0001049!1.32e-18!57;UBERON:0005068!1.32e-18!57;UBERON:0006241!1.32e-18!57;UBERON:0007135!1.32e-18!57;UBERON:0000073!1.32e-18!94;UBERON:0001016!1.32e-18!94;UBERON:0001017!2.32e-18!82;UBERON:0000955!4.57e-18!69;UBERON:0006238!4.57e-18!69;UBERON:0002616!3.50e-16!59;UBERON:0002780!2.35e-15!41;UBERON:0001890!2.35e-15!41;UBERON:0006240!2.35e-15!41;UBERON:0003080!1.18e-14!42;UBERON:0002346!4.51e-13!90;UBERON:0002020!1.28e-12!34;UBERON:0003528!1.28e-12!34;UBERON:0001893!1.34e-12!34;UBERON:0003075!4.10e-12!86;UBERON:0007284!4.10e-12!86;UBERON:0002791!6.02e-12!33;UBERON:0001869!1.13e-11!32;UBERON:0003056!9.69e-11!61;UBERON:0002619!6.02e-10!22;UBERON:0001950!1.04e-08!20;UBERON:0000956!1.20e-08!25;UBERON:0000203!1.20e-08!25;UBERON:0007023!1.81e-08!115;UBERON:0000033!3.77e-08!123;UBERON:0000153!3.09e-07!129;UBERON:0007811!3.09e-07!129|ontology_enrichment_uberon_v019=UBERON:0001870;7.58e-15;3!UBERON:0001876;1.31e-10;2!UBERON:0002702;1.31e-10;2!UBERON:0002420;6.15e-09;9!UBERON:0007245;6.15e-09;9!UBERON:0010009;6.15e-09;9!UBERON:0010011;6.15e-09;9!UBERON:0000454;6.15e-09;9!UBERON:0002780;6.60e-09;41!UBERON:0001890;6.60e-09;41!UBERON:0002791;3.48e-08;32!UBERON:0001869;9.19e-08;32!UBERON:0005383;1.07e-07;3!UBERON:0005382;1.07e-07;3!UBERON:0001950;1.49e-07;20!UBERON:0003528;3.24e-07;34!UBERON:0002020;3.24e-07;34!UBERON:0001893;4.64e-07;34!UBERON:0002619;7.63e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0001870,1.17e-14,3;UBERON:0002780,1.91e-11,41;UBERON:0001890,1.91e-11,41;UBERON:0003080,1.91e-11,41;UBERON:0006240,1.91e-11,41;UBERON:0001876,1.01e-10,2;UBERON:0002702,1.23e-10,2;UBERON:0000073,4.43e-10,53;UBERON:0002616,4.43e-10,53;UBERON:0001049,2.01e-09,56;UBERON:0005068,2.01e-09,56;UBERON:0006241,2.01e-09,56;UBERON:0007135,2.01e-09,56;UBERON:0002420,5.19e-09,9;UBERON:0007245,5.19e-09,9;UBERON:0010009,5.19e-09,9;UBERON:0010011,5.19e-09,9;UBERON:0000454,5.19e-09,9;UBERON:0002346,8.40e-09,86;UBERON:0000955,1.12e-08,68;UBERON:0006238,1.12e-08,68;UBERON:0003056,1.53e-08,61;UBERON:0002791,4.48e-08,32;UBERON:0001869,4.48e-08,32;UBERON:0005383,9.74e-08,3;UBERON:0005382,9.74e-08,3;UBERON:0003528,1.53e-07,34;UBERON:0002020,1.53e-07,34;UBERON:0001893,1.53e-07,34;UBERON:0001950,1.57e-07,20;UBERON:0001017,6.51e-07,81;UBERON:0003075,7.00e-07,82;UBERON:0007284,7.00e-07,82;UBERON:0002619,8.01e-07,22|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0,0.246301768349837,0.0787107813136792,1.18009283054671,0.383829398097213,0.309632246632152,0,0,0,0.0774672005803016,0,0,0,0.401088894940283,1.30206522429511,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.47296445977717,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,1.1384259382189,0,0.382273228125229,0,0,0.526768169550154,1.7703879310245,0,2.67281948699362,0,0,0.473447805734733,0,0.334231370655521,0.294605907474837,0.443067789167242,0,0.128091319725675,0.260118695119756,0,0,0,1.33457906845854,0.802622484269139,5.22677619024884,0.113309342697566,0,1.71813722741315,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,2.01606743224732,1.60464117470104,0.579297615531196,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,1.06502877754984,0,0,0,0,0,0,0,0.348581828608555,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,1.29707958075265,0.75745460055828,0.126995788584338,0.381988425558278,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0.904318131178758,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0,0,0.358121926479791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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10233 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19138 | |||
|TSSclassifier=S | |||
|UniProt=Q53EV4 | |||
|association_with_transcript=0bp_to_ENST00000443597_5end | |||
|description=CAGE_peak_5_at_LRRC23_5end | |||
|id=chr12:7014064..7014075,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.99e-15;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.82e-15,3;CL:0000825,1.82e-15,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.48e-19!86;UBERON:0001049!1.32e-18!57;UBERON:0005068!1.32e-18!57;UBERON:0006241!1.32e-18!57;UBERON:0007135!1.32e-18!57;UBERON:0000073!1.32e-18!94;UBERON:0001016!1.32e-18!94;UBERON:0001017!2.32e-18!82;UBERON:0000955!4.57e-18!69;UBERON:0006238!4.57e-18!69;UBERON:0002616!3.50e-16!59;UBERON:0002780!2.35e-15!41;UBERON:0001890!2.35e-15!41;UBERON:0006240!2.35e-15!41;UBERON:0003080!1.18e-14!42;UBERON:0002346!4.51e-13!90;UBERON:0002020!1.28e-12!34;UBERON:0003528!1.28e-12!34;UBERON:0001893!1.34e-12!34;UBERON:0003075!4.10e-12!86;UBERON:0007284!4.10e-12!86;UBERON:0002791!6.02e-12!33;UBERON:0001869!1.13e-11!32;UBERON:0003056!9.69e-11!61;UBERON:0002619!6.02e-10!22;UBERON:0001950!1.04e-08!20;UBERON:0000956!1.20e-08!25;UBERON:0000203!1.20e-08!25;UBERON:0007023!1.81e-08!115;UBERON:0000033!3.77e-08!123;UBERON:0000153!3.09e-07!129;UBERON:0007811!3.09e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001870;7.58e-15;3!UBERON:0001876;1.31e-10;2!UBERON:0002702;1.31e-10;2!UBERON:0002420;6.15e-09;9!UBERON:0007245;6.15e-09;9!UBERON:0010009;6.15e-09;9!UBERON:0010011;6.15e-09;9!UBERON:0000454;6.15e-09;9!UBERON:0002780;6.60e-09;41!UBERON:0001890;6.60e-09;41!UBERON:0002791;3.48e-08;32!UBERON:0001869;9.19e-08;32!UBERON:0005383;1.07e-07;3!UBERON:0005382;1.07e-07;3!UBERON:0001950;1.49e-07;20!UBERON:0003528;3.24e-07;34!UBERON:0002020;3.24e-07;34!UBERON:0001893;4.64e-07;34!UBERON:0002619;7.63e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001870,1.17e-14,3;UBERON:0002780,1.91e-11,41;UBERON:0001890,1.91e-11,41;UBERON:0003080,1.91e-11,41;UBERON:0006240,1.91e-11,41;UBERON:0001876,1.01e-10,2;UBERON:0002702,1.23e-10,2;UBERON:0000073,4.43e-10,53;UBERON:0002616,4.43e-10,53;UBERON:0001049,2.01e-09,56;UBERON:0005068,2.01e-09,56;UBERON:0006241,2.01e-09,56;UBERON:0007135,2.01e-09,56;UBERON:0002420,5.19e-09,9;UBERON:0007245,5.19e-09,9;UBERON:0010009,5.19e-09,9;UBERON:0010011,5.19e-09,9;UBERON:0000454,5.19e-09,9;UBERON:0002346,8.40e-09,86;UBERON:0000955,1.12e-08,68;UBERON:0006238,1.12e-08,68;UBERON:0003056,1.53e-08,61;UBERON:0002791,4.48e-08,32;UBERON:0001869,4.48e-08,32;UBERON:0005383,9.74e-08,3;UBERON:0005382,9.74e-08,3;UBERON:0003528,1.53e-07,34;UBERON:0002020,1.53e-07,34;UBERON:0001893,1.53e-07,34;UBERON:0001950,1.57e-07,20;UBERON:0001017,6.51e-07,81;UBERON:0003075,7.00e-07,82;UBERON:0007284,7.00e-07,82;UBERON:0002619,8.01e-07,22 | |||
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| |||
|short_description=p5@LRRC23 | |||
}} |
Revision as of 00:14, 11 September 2013
Short description: | p5@LRRC23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LRRC23_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000443597_5end |
EntrezGene: | LRRC23 |
HGNC: | 19138 |
UniProt: | Q53EV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.82e-15 | 3 |
pro-NK cell | 1.82e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
frontal cortex | 1.17e-14 | 3 |
regional part of forebrain | 1.91e-11 | 41 |
forebrain | 1.91e-11 | 41 |
anterior neural tube | 1.91e-11 | 41 |
future forebrain | 1.91e-11 | 41 |
amygdala | 1.01e-10 | 2 |
middle frontal gyrus | 1.23e-10 | 2 |
regional part of nervous system | 4.43e-10 | 53 |
regional part of brain | 4.43e-10 | 53 |
neural tube | 2.01e-09 | 56 |
neural rod | 2.01e-09 | 56 |
future spinal cord | 2.01e-09 | 56 |
neural keel | 2.01e-09 | 56 |
basal ganglion | 5.19e-09 | 9 |
nuclear complex of neuraxis | 5.19e-09 | 9 |
aggregate regional part of brain | 5.19e-09 | 9 |
collection of basal ganglia | 5.19e-09 | 9 |
cerebral subcortex | 5.19e-09 | 9 |
neurectoderm | 8.40e-09 | 86 |
brain | 1.12e-08 | 68 |
future brain | 1.12e-08 | 68 |
pre-chordal neural plate | 1.53e-08 | 61 |
regional part of telencephalon | 4.48e-08 | 32 |
cerebral hemisphere | 4.48e-08 | 32 |
caudate-putamen | 9.74e-08 | 3 |
dorsal striatum | 9.74e-08 | 3 |
brain grey matter | 1.53e-07 | 34 |
gray matter | 1.53e-07 | 34 |
telencephalon | 1.53e-07 | 34 |
neocortex | 1.57e-07 | 20 |
central nervous system | 6.51e-07 | 81 |
neural plate | 7.00e-07 | 82 |
presumptive neural plate | 7.00e-07 | 82 |
regional part of cerebral cortex | 8.01e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.