FFCP PHASE1:Hg19::chr21:43712787..43712803,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4079|description=CAGE_peak_at_chr21:43712787..43712803,+|id=chr21:43712787..43712803,+|ontology_enrichment_celltype=CL:0000738!2.77e-13!140;CL:0002087!7.80e-12!119;CL:0002031!3.88e-11!124;CL:0002057!4.97e-11!42;CL:0000860!2.55e-10!45;CL:0000037!1.50e-08!172;CL:0000566!1.50e-08!172;CL:0002032!1.96e-08!165;CL:0000837!1.96e-08!165;CL:0000988!6.16e-08!182;CL:0000542!6.13e-07!53;CL:0000051!6.13e-07!53|ontology_enrichment_celltype_v019=CL:0000623;5.67e-12;3!CL:0000791;1.52e-07;18!CL:0000789;1.52e-07;18!CL:0002419;1.52e-07;18!CL:0000860;2.58e-07;33!CL:0002057;2.58e-07;33|ontology_enrichment_celltype_v019_2=CL:0000623,3.78e-12,3;CL:0000825,3.78e-12,3;CL:0002087,6.92e-12,115;CL:0000738,2.17e-11,136;CL:0002031,3.62e-11,120;CL:0002032,9.90e-09,161;CL:0000837,9.90e-09,161;CL:0000860,1.20e-08,42;CL:0002057,1.20e-08,42;CL:0000838,2.45e-08,52;CL:0000037,3.92e-08,168;CL:0000542,3.92e-08,53;CL:0000051,3.92e-08,53;CL:0000791,1.34e-07,18;CL:0000789,1.34e-07,18;CL:0002420,1.34e-07,18;CL:0002419,1.34e-07,18;CL:0000790,1.34e-07,18;CL:0000988,1.94e-07,177;CL:0000473,2.69e-07,48;CL:0000234,2.69e-07,48|ontology_enrichment_development_v019=CL:0000790;1.52e-07;18!CL:0002057;3.15e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.20e-21!115;UBERON:0001049!6.42e-18!57;UBERON:0005068!6.42e-18!57;UBERON:0006241!6.42e-18!57;UBERON:0007135!6.42e-18!57;UBERON:0002780!3.84e-17!41;UBERON:0001890!3.84e-17!41;UBERON:0006240!3.84e-17!41;UBERON:0003080!1.88e-16!42;UBERON:0000955!3.33e-15!69;UBERON:0006238!3.33e-15!69;UBERON:0002616!9.61e-15!59;UBERON:0001017!2.32e-14!82;UBERON:0002020!7.10e-14!34;UBERON:0003528!7.10e-14!34;UBERON:0005743!1.64e-13!86;UBERON:0001893!3.18e-13!34;UBERON:0002791!6.78e-13!33;UBERON:0000073!9.63e-13!94;UBERON:0001016!9.63e-13!94;UBERON:0001869!7.55e-12!32;UBERON:0002619!8.02e-11!22;UBERON:0002346!1.03e-09!90;UBERON:0003075!1.31e-09!86;UBERON:0007284!1.31e-09!86;UBERON:0001950!2.09e-09!20;UBERON:0003056!2.73e-09!61;UBERON:0000956!7.84e-09!25;UBERON:0000203!7.84e-09!25;UBERON:0002193!7.25e-08!112;UBERON:0000153!1.38e-07!129;UBERON:0007811!1.38e-07!129;UBERON:0002390!1.94e-07!102;UBERON:0003061!1.94e-07!102;UBERON:0002308!6.24e-07!9;UBERON:0000125!6.24e-07!9;UBERON:0002420!7.60e-07!9;UBERON:0007245!7.60e-07!9;UBERON:0010009!7.60e-07!9;UBERON:0010011!7.60e-07!9;UBERON:0000454!7.60e-07!9;UBERON:0000033!8.82e-07!123|ontology_enrichment_uberon_v019=UBERON:0000073;2.23e-11;53!UBERON:0002616;2.23e-11;53!UBERON:0000125;3.47e-10;9!UBERON:0002308;3.47e-10;9!UBERON:0002784;4.34e-09;4!UBERON:0001894;9.36e-09;7!UBERON:0001897;1.15e-08;2!UBERON:0010225;1.15e-08;2!UBERON:0002148;2.69e-08;2!UBERON:0006331;2.69e-08;2!UBERON:0009662;2.69e-08;2!UBERON:0004733;9.39e-08;12!UBERON:0002028;9.39e-08;12!UBERON:0004732;3.94e-07;13!UBERON:0002680;5.06e-07;9!UBERON:0001895;5.06e-07;9!UBERON:0002780;6.23e-07;41!UBERON:0001890;6.23e-07;41!UBERON:0002420;8.14e-07;9!UBERON:0007245;8.14e-07;9!UBERON:0010009;8.14e-07;9!UBERON:0010011;8.14e-07;9!UBERON:0000454;8.14e-07;9!UBERON:0003528;8.72e-07;34!UBERON:0002020;8.72e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.00e-16,53;UBERON:0002616,7.00e-16,53;UBERON:0001049,7.82e-15,56;UBERON:0005068,7.82e-15,56;UBERON:0006241,7.82e-15,56;UBERON:0007135,7.82e-15,56;UBERON:0000955,5.95e-13,68;UBERON:0006238,5.95e-13,68;UBERON:0001017,2.86e-10,81;UBERON:0000125,2.92e-10,9;UBERON:0002308,2.92e-10,9;UBERON:0002780,4.34e-10,41;UBERON:0001890,4.34e-10,41;UBERON:0003080,4.34e-10,41;UBERON:0006240,4.34e-10,41;UBERON:0002784,4.37e-09,4;UBERON:0003075,5.75e-09,82;UBERON:0007284,5.75e-09,82;UBERON:0001016,7.20e-09,89;UBERON:0001897,8.64e-09,2;UBERON:0010225,8.64e-09,2;UBERON:0003528,1.10e-08,34;UBERON:0002020,1.10e-08,34;UBERON:0001894,1.15e-08,7;UBERON:0006222,1.15e-08,7;UBERON:0002148,1.27e-08,2;UBERON:0006331,1.27e-08,2;UBERON:0009662,1.27e-08,2;UBERON:0002346,2.21e-08,86;UBERON:0004733,7.46e-08,12;UBERON:0002028,7.46e-08,12;UBERON:0007277,7.46e-08,12;UBERON:0004732,3.19e-07,13;UBERON:0002680,3.43e-07,9;UBERON:0001895,3.43e-07,9;UBERON:0010092,3.43e-07,9;UBERON:0002420,7.62e-07,9;UBERON:0007245,7.62e-07,9;UBERON:0010009,7.62e-07,9;UBERON:0010011,7.62e-07,9;UBERON:0000454,7.62e-07,9|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.305653622991805,0.328402357799783,0.0787107813136792,0,0.383829398097213,1.39334510984468,0,0,0,0.542270404062111,0,0,0.553995408531877,1.40381113229099,1.73608696572681,0,0,0,1.59938062657521,1.51150377475524,0.727752183563449,0.929716147622738,0.411167888021826,0.619412741790207,0,0.512321413058201,0.236482229888585,0,0,1.35426486594342,2.44715041405386,1.09162460023138,0,0.306083892370903,0.320929027076094,0.639337125799041,0.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394,0.267964130156178,1.65833887891756,2.0686599172379,0.213233981900981,0,0.193766729508018,0.993195428733726,0,0.12729431655633,0.404234377916439,0.217716747896961,0,0.202056159043763,0.0717222053926763,0,0.244209805832924,0,0,0.538951212639521,0,0.122241444182866,0,0,0,0|short_description=p@chr21:43712787..43712803,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4079 | |||
|description=CAGE_peak_at_chr21:43712787..43712803,+ | |||
|id=chr21:43712787..43712803,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.77e-13!140;CL:0002087!7.80e-12!119;CL:0002031!3.88e-11!124;CL:0002057!4.97e-11!42;CL:0000860!2.55e-10!45;CL:0000037!1.50e-08!172;CL:0000566!1.50e-08!172;CL:0002032!1.96e-08!165;CL:0000837!1.96e-08!165;CL:0000988!6.16e-08!182;CL:0000542!6.13e-07!53;CL:0000051!6.13e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000623;5.67e-12;3!CL:0000791;1.52e-07;18!CL:0000789;1.52e-07;18!CL:0002419;1.52e-07;18!CL:0000860;2.58e-07;33!CL:0002057;2.58e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.78e-12,3;CL:0000825,3.78e-12,3;CL:0002087,6.92e-12,115;CL:0000738,2.17e-11,136;CL:0002031,3.62e-11,120;CL:0002032,9.90e-09,161;CL:0000837,9.90e-09,161;CL:0000860,1.20e-08,42;CL:0002057,1.20e-08,42;CL:0000838,2.45e-08,52;CL:0000037,3.92e-08,168;CL:0000542,3.92e-08,53;CL:0000051,3.92e-08,53;CL:0000791,1.34e-07,18;CL:0000789,1.34e-07,18;CL:0002420,1.34e-07,18;CL:0002419,1.34e-07,18;CL:0000790,1.34e-07,18;CL:0000988,1.94e-07,177;CL:0000473,2.69e-07,48;CL:0000234,2.69e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000790;1.52e-07;18!CL:0002057;3.15e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.20e-21!115;UBERON:0001049!6.42e-18!57;UBERON:0005068!6.42e-18!57;UBERON:0006241!6.42e-18!57;UBERON:0007135!6.42e-18!57;UBERON:0002780!3.84e-17!41;UBERON:0001890!3.84e-17!41;UBERON:0006240!3.84e-17!41;UBERON:0003080!1.88e-16!42;UBERON:0000955!3.33e-15!69;UBERON:0006238!3.33e-15!69;UBERON:0002616!9.61e-15!59;UBERON:0001017!2.32e-14!82;UBERON:0002020!7.10e-14!34;UBERON:0003528!7.10e-14!34;UBERON:0005743!1.64e-13!86;UBERON:0001893!3.18e-13!34;UBERON:0002791!6.78e-13!33;UBERON:0000073!9.63e-13!94;UBERON:0001016!9.63e-13!94;UBERON:0001869!7.55e-12!32;UBERON:0002619!8.02e-11!22;UBERON:0002346!1.03e-09!90;UBERON:0003075!1.31e-09!86;UBERON:0007284!1.31e-09!86;UBERON:0001950!2.09e-09!20;UBERON:0003056!2.73e-09!61;UBERON:0000956!7.84e-09!25;UBERON:0000203!7.84e-09!25;UBERON:0002193!7.25e-08!112;UBERON:0000153!1.38e-07!129;UBERON:0007811!1.38e-07!129;UBERON:0002390!1.94e-07!102;UBERON:0003061!1.94e-07!102;UBERON:0002308!6.24e-07!9;UBERON:0000125!6.24e-07!9;UBERON:0002420!7.60e-07!9;UBERON:0007245!7.60e-07!9;UBERON:0010009!7.60e-07!9;UBERON:0010011!7.60e-07!9;UBERON:0000454!7.60e-07!9;UBERON:0000033!8.82e-07!123 | |||
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| |||
|short_description=p@chr21:43712787..43712803,+ | |||
}} |
Revision as of 10:31, 12 September 2013
Short description: | p@chr21:43712787..43712803, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:43712787..43712803, + |
Coexpression cluster: | C4079_CD4_CD8_CD14_cerebellum_CD19_Natural_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.78e-12 | 3 |
pro-NK cell | 3.78e-12 | 3 |
nongranular leukocyte | 6.92e-12 | 115 |
leukocyte | 2.17e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 3.62e-11 | 120 |
hematopoietic oligopotent progenitor cell | 9.90e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.90e-09 | 161 |
classical monocyte | 1.20e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.20e-08 | 42 |
lymphoid lineage restricted progenitor cell | 2.45e-08 | 52 |
hematopoietic stem cell | 3.92e-08 | 168 |
lymphocyte | 3.92e-08 | 53 |
common lymphoid progenitor | 3.92e-08 | 53 |
mature alpha-beta T cell | 1.34e-07 | 18 |
alpha-beta T cell | 1.34e-07 | 18 |
immature T cell | 1.34e-07 | 18 |
mature T cell | 1.34e-07 | 18 |
immature alpha-beta T cell | 1.34e-07 | 18 |
hematopoietic cell | 1.94e-07 | 177 |
defensive cell | 2.69e-07 | 48 |
phagocyte | 2.69e-07 | 48 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.