FFCP PHASE1:Mm9::chr13:9279895..9279899,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:9279895..9279899,+|id=chr13:9279895..9279899,+|ontology_enrichment_celltype=CL:0000221!4.69e-22!44;CL:0000133!4.69e-22!44;CL:0000540!6.64e-22!33;CL:0000047!6.64e-22!33;CL:0000031!6.64e-22!33;CL:0000404!6.64e-22!33;CL:0002319!2.19e-21!43;CL:0000393!1.89e-19!39;CL:0000211!1.89e-19!39;CL:0000055!7.17e-19!50;CL:0000117!1.06e-13!23;CL:0000337!1.06e-13!23;CL:0002321!2.45e-12!70;CL:0000220!2.45e-12!70;CL:0000107!5.43e-09!9|ontology_enrichment_celltype_v019_2=CL:0000540,2.41e-54,33;CL:0000047,2.41e-54,33;CL:0000031,2.41e-54,33;CL:0000404,2.41e-54,33;CL:0002319,8.93e-49,43;CL:0000221,1.39e-47,44;CL:0000133,1.39e-47,44;CL:0000393,2.04e-45,39;CL:0000211,2.04e-45,39;CL:0000117,4.83e-32,23;CL:0000337,4.83e-32,23;CL:0002321,1.70e-28,70;CL:0000107,1.53e-25,9;CL:0000723,2.85e-17,91;CL:0000048,2.85e-17,91;CL:0000034,5.87e-16,97;CL:0002613,6.86e-12,3;CL:0002612,1.85e-11,3;CL:0002614,6.76e-11,3;CL:0002609,2.00e-09,6;CL:0000217,5.25e-08,2;CL:0000328,5.25e-08,2;CL:0002573,5.25e-08,2;CL:0002376,5.25e-08,2;CL:0000218,5.25e-08,2;CL:0000692,5.25e-08,2;CL:0002377,5.25e-08,2;CL:0002375,5.25e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.82e-14!75;UBERON:0001016!3.82e-14!75;UBERON:0001017!7.61e-13!73;UBERON:0005743!7.61e-13!73;UBERON:0004121!5.64e-12!102;UBERON:0000924!5.64e-12!102;UBERON:0006601!5.64e-12!102;UBERON:0000010!1.31e-10!11;UBERON:0002410!5.43e-09!9;UBERON:0002020!3.84e-07!34;UBERON:0002346!5.69e-07!71;UBERON:0003075!5.69e-07!71;UBERON:0007284!5.69e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.56e-32,11;UBERON:0001016,2.45e-26,75;UBERON:0002410,1.53e-25,9;UBERON:0001017,1.70e-22,73;UBERON:0004121,5.77e-20,95;UBERON:0000924,5.77e-20,95;UBERON:0006601,5.77e-20,95;UBERON:0002420,9.95e-16,8;UBERON:0007245,9.95e-16,8;UBERON:0010009,9.95e-16,8;UBERON:0010011,9.95e-16,8;UBERON:0000454,9.95e-16,8;UBERON:0002020,2.79e-15,34;UBERON:0000013,2.28e-12,3;UBERON:0000011,1.71e-11,3;UBERON:0002257,1.85e-11,3;UBERON:0002038,6.76e-11,3;UBERON:0009663,6.76e-11,3;UBERON:0009661,6.76e-11,3;UBERON:0000125,6.76e-11,3;UBERON:0002308,6.76e-11,3;UBERON:0003528,1.52e-10,29;UBERON:0002791,1.52e-10,29;UBERON:0001893,1.52e-10,29;UBERON:0000073,3.12e-10,54;UBERON:0002346,1.00e-09,64;UBERON:0003075,1.00e-09,64;UBERON:0007284,1.00e-09,64;UBERON:0001049,3.67e-09,52;UBERON:0005068,3.67e-09,52;UBERON:0006241,3.67e-09,52;UBERON:0007135,3.67e-09,52;UBERON:0002950,2.71e-08,4;UBERON:0001891,2.71e-08,4;UBERON:0009616,2.71e-08,4;UBERON:0010286,2.71e-08,4;UBERON:0010371,3.54e-08,73;UBERON:0011216,1.17e-07,194;UBERON:0002780,2.04e-07,39;UBERON:0001890,2.04e-07,39;UBERON:0006240,2.04e-07,39;UBERON:0000369,2.65e-07,5;UBERON:0002435,2.65e-07,5;UBERON:0000204,2.65e-07,5;UBERON:0010082,2.65e-07,5;UBERON:0003080,3.44e-07,40;UBERON:0001948,4.74e-07,5;UBERON:0002315,4.74e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0.139986421625363,0,0,0,0,0.771778308107841,0.85960031981627,0,0.809265843438391,3.1739458756322,0,0,0,0,0,0,0.599200221036809,0,1.55534418462716,2.70011876663381,0.841299845405528,0,0.883474163806454,1.22490799214954,1.24599112323707,0.919218786610021,0,0.383062014255563,1.22885226604995,2.37395317914349,1.64677758484337,4.16730696445408,1.11673199600552,1.12552522006336,2.75036845998258,1.76777151284201,2.13557521198654,2.23679334990361,1.8931548333296,1.81371744256285,0,0,0.679971333707751,0.539703191637817,0,0,0,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.301445281105245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254140454146129,0.149790639404823,0,0,0.347648640384553,0,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0.468508622798644,0,0.215567992932842,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0.540186184383045,0,0,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.292399974850665,0.658650345873152,0.134206418760372,0,0,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0,0.189709611372772,0,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0.482443521363367,0,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0,0.631016438832513,1.56175497718655,2.80050417052639,1.91175038362042,2.22798674082394,1.98153571552183,3.23848561339915,4.09158201075837,2.37172666767914,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,0,0,0.206386867963223,0,0,0,0.228778173206523,0.169978429993855,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0.404593039154462,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0.258319646955462,0,0,0,0,0.483168241652012,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr13:9279895..9279899,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:9279895..9279899,+ | |||
|id=chr13:9279895..9279899,+ | |||
|ontology_enrichment_celltype=CL:0000221!4.69e-22!44;CL:0000133!4.69e-22!44;CL:0000540!6.64e-22!33;CL:0000047!6.64e-22!33;CL:0000031!6.64e-22!33;CL:0000404!6.64e-22!33;CL:0002319!2.19e-21!43;CL:0000393!1.89e-19!39;CL:0000211!1.89e-19!39;CL:0000055!7.17e-19!50;CL:0000117!1.06e-13!23;CL:0000337!1.06e-13!23;CL:0002321!2.45e-12!70;CL:0000220!2.45e-12!70;CL:0000107!5.43e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.41e-54,33;CL:0000047,2.41e-54,33;CL:0000031,2.41e-54,33;CL:0000404,2.41e-54,33;CL:0002319,8.93e-49,43;CL:0000221,1.39e-47,44;CL:0000133,1.39e-47,44;CL:0000393,2.04e-45,39;CL:0000211,2.04e-45,39;CL:0000117,4.83e-32,23;CL:0000337,4.83e-32,23;CL:0002321,1.70e-28,70;CL:0000107,1.53e-25,9;CL:0000723,2.85e-17,91;CL:0000048,2.85e-17,91;CL:0000034,5.87e-16,97;CL:0002613,6.86e-12,3;CL:0002612,1.85e-11,3;CL:0002614,6.76e-11,3;CL:0002609,2.00e-09,6;CL:0000217,5.25e-08,2;CL:0000328,5.25e-08,2;CL:0002573,5.25e-08,2;CL:0002376,5.25e-08,2;CL:0000218,5.25e-08,2;CL:0000692,5.25e-08,2;CL:0002377,5.25e-08,2;CL:0002375,5.25e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.82e-14!75;UBERON:0001016!3.82e-14!75;UBERON:0001017!7.61e-13!73;UBERON:0005743!7.61e-13!73;UBERON:0004121!5.64e-12!102;UBERON:0000924!5.64e-12!102;UBERON:0006601!5.64e-12!102;UBERON:0000010!1.31e-10!11;UBERON:0002410!5.43e-09!9;UBERON:0002020!3.84e-07!34;UBERON:0002346!5.69e-07!71;UBERON:0003075!5.69e-07!71;UBERON:0007284!5.69e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.56e-32,11;UBERON:0001016,2.45e-26,75;UBERON:0002410,1.53e-25,9;UBERON:0001017,1.70e-22,73;UBERON:0004121,5.77e-20,95;UBERON:0000924,5.77e-20,95;UBERON:0006601,5.77e-20,95;UBERON:0002420,9.95e-16,8;UBERON:0007245,9.95e-16,8;UBERON:0010009,9.95e-16,8;UBERON:0010011,9.95e-16,8;UBERON:0000454,9.95e-16,8;UBERON:0002020,2.79e-15,34;UBERON:0000013,2.28e-12,3;UBERON:0000011,1.71e-11,3;UBERON:0002257,1.85e-11,3;UBERON:0002038,6.76e-11,3;UBERON:0009663,6.76e-11,3;UBERON:0009661,6.76e-11,3;UBERON:0000125,6.76e-11,3;UBERON:0002308,6.76e-11,3;UBERON:0003528,1.52e-10,29;UBERON:0002791,1.52e-10,29;UBERON:0001893,1.52e-10,29;UBERON:0000073,3.12e-10,54;UBERON:0002346,1.00e-09,64;UBERON:0003075,1.00e-09,64;UBERON:0007284,1.00e-09,64;UBERON:0001049,3.67e-09,52;UBERON:0005068,3.67e-09,52;UBERON:0006241,3.67e-09,52;UBERON:0007135,3.67e-09,52;UBERON:0002950,2.71e-08,4;UBERON:0001891,2.71e-08,4;UBERON:0009616,2.71e-08,4;UBERON:0010286,2.71e-08,4;UBERON:0010371,3.54e-08,73;UBERON:0011216,1.17e-07,194;UBERON:0002780,2.04e-07,39;UBERON:0001890,2.04e-07,39;UBERON:0006240,2.04e-07,39;UBERON:0000369,2.65e-07,5;UBERON:0002435,2.65e-07,5;UBERON:0000204,2.65e-07,5;UBERON:0010082,2.65e-07,5;UBERON:0003080,3.44e-07,40;UBERON:0001948,4.74e-07,5;UBERON:0002315,4.74e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0.139986421625363,0,0,0,0,0.771778308107841,0.85960031981627,0,0.809265843438391,3.1739458756322,0,0,0,0,0,0,0.599200221036809,0,1.55534418462716,2.70011876663381,0.841299845405528,0,0.883474163806454,1.22490799214954,1.24599112323707,0.919218786610021,0,0.383062014255563,1.22885226604995,2.37395317914349,1.64677758484337,4.16730696445408,1.11673199600552,1.12552522006336,2.75036845998258,1.76777151284201,2.13557521198654,2.23679334990361,1.8931548333296,1.81371744256285,0,0,0.679971333707751,0.539703191637817,0,0,0,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.301445281105245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254140454146129,0.149790639404823,0,0,0.347648640384553,0,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0.468508622798644,0,0.215567992932842,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0.540186184383045,0,0,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.292399974850665,0.658650345873152,0.134206418760372,0,0,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0,0.189709611372772,0,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0.482443521363367,0,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0,0.631016438832513,1.56175497718655,2.80050417052639,1.91175038362042,2.22798674082394,1.98153571552183,3.23848561339915,4.09158201075837,2.37172666767914,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,0,0,0.206386867963223,0,0,0,0.228778173206523,0.169978429993855,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0.404593039154462,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0.258319646955462,0,0,0,0,0.483168241652012,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:9279895..9279899,+ | |||
}} |
Revision as of 01:16, 13 September 2013
Short description: | p@chr13:9279895..9279899, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:9279895..9279899, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.41e-54 | 33 |
neuronal stem cell | 2.41e-54 | 33 |
neuroblast | 2.41e-54 | 33 |
electrically signaling cell | 2.41e-54 | 33 |
neural cell | 8.93e-49 | 43 |
ectodermal cell | 1.39e-47 | 44 |
neurectodermal cell | 1.39e-47 | 44 |
electrically responsive cell | 2.04e-45 | 39 |
electrically active cell | 2.04e-45 | 39 |
CNS neuron (sensu Vertebrata) | 4.83e-32 | 23 |
neuroblast (sensu Vertebrata) | 4.83e-32 | 23 |
embryonic cell | 1.70e-28 | 70 |
autonomic neuron | 1.53e-25 | 9 |
somatic stem cell | 2.85e-17 | 91 |
multi fate stem cell | 2.85e-17 | 91 |
stem cell | 5.87e-16 | 97 |
striatum neuron | 6.86e-12 | 3 |
neuron of the ventral spinal cord | 1.85e-11 | 3 |
neuron of the substantia nigra | 6.76e-11 | 3 |
neuron of cerebral cortex | 2.00e-09 | 6 |
insulating cell | 5.25e-08 | 2 |
myelin accumulating cell | 5.25e-08 | 2 |
Schwann cell | 5.25e-08 | 2 |
non-myelinating Schwann cell | 5.25e-08 | 2 |
myelinating Schwann cell;;Schwann cell | 5.25e-08 | 2 |
terminal Schwann cell | 5.25e-08 | 2 |
immature Schwann cell | 5.25e-08 | 2 |
Schwann cell precursor | 5.25e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.