FFCP PHASE1:Hg19::chr4:76481268..76481289,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=152816|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26300|TSSclassifier=N|UniProt=E7ETQ0|association_with_transcript=0bp_to_ENST00000435974_5end|coexpression_cluster_id=C406|description=CAGE_peak_1_at_C4orf26_5end|id=chr4:76481268..76481289,+|ontology_enrichment_celltype=CL:1000497!1.39e-08!18;CL:0002518!1.39e-08!18;CL:1000507!2.47e-07!12;CL:1000494!2.47e-07!12;CL:1000449!2.66e-07!16|ontology_enrichment_celltype_v019=CL:1000507;2.46e-14;10!CL:1000494;2.46e-14;10!CL:1000497;6.44e-14;17!CL:0002518;6.44e-14;17!CL:1000449;1.53e-13;15!CL:0000349;4.83e-13;19!CL:0000244;1.72e-09;4!CL:0000731;1.72e-09;4!CL:0002681;4.03e-09;12!CL:0002584;4.03e-09;12!CL:0002166;1.95e-08;3!CL:0002541;2.96e-08;3!CL:0002621;8.94e-08;3!CL:0002577;1.32e-07;3|ontology_enrichment_celltype_v019_2=CL:1000507,3.41e-14,10;CL:1000494,3.41e-14,10;CL:1000497,7.09e-14,17;CL:0002518,7.09e-14,17;CL:1000449,2.06e-13,15;CL:0000349,4.94e-13,19;CL:0000244,1.71e-09,4;CL:0000731,1.71e-09,4;CL:0002681,5.66e-09,12;CL:0002584,5.66e-09,12;CL:0002166,1.95e-08,3;CL:0002541,2.97e-08,3;CL:0002621,8.86e-08,3;CL:0002577,1.38e-07,3;CL:0000066,2.32e-07,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!1.92e-08!14;DOID:193!1.07e-07!29;DOID:120!1.83e-07!27|ontology_enrichment_disease_v019=DOID:2394;3.28e-14;14!DOID:193;2.27e-08;29!DOID:120;1.20e-07;27|ontology_enrichment_disease_v019_2=DOID:2394,2.72e-14,14;DOID:193,2.04e-08,29;DOID:120,1.09e-07,27|ontology_enrichment_uberon=UBERON:0000478!2.08e-11!24;UBERON:0005631!7.76e-11!14;UBERON:0000158!7.76e-11!14;UBERON:0003124!7.43e-09!7;UBERON:0009773!2.47e-07!12;UBERON:0001231!2.47e-07!12;UBERON:0004810!2.47e-07!12;UBERON:0004211!2.66e-07!16;UBERON:0001285!2.66e-07!16;UBERON:0007684!2.66e-07!16;UBERON:0003220!2.66e-07!16;UBERON:0004208!2.66e-07!16;UBERON:0006554!8.84e-07!44|ontology_enrichment_uberon_v019=UBERON:0004211;2.46e-14;10!UBERON:0009773;2.46e-14;10!UBERON:0001231;2.46e-14;10!UBERON:0004810;2.46e-14;10!UBERON:0006555;1.53e-13;15!UBERON:0004819;1.53e-13;15!UBERON:0001285;1.53e-13;15!UBERON:0007684;1.53e-13;15!UBERON:0006554;2.56e-13;30!UBERON:0001008;2.56e-13;30!UBERON:0000478;1.06e-11;24!UBERON:0005631;3.35e-11;10!UBERON:0000158;3.35e-11;10!UBERON:0001987;1.23e-09;4!UBERON:0001225;4.03e-09;12!UBERON:0008987;4.03e-09;12!UBERON:0002113;4.43e-09;24!UBERON:0011143;4.43e-09;24!UBERON:0000353;5.80e-09;15!UBERON:0000486;1.50e-08;12!UBERON:0003124;2.96e-08;3!UBERON:0000920;2.96e-08;3!UBERON:0001949;8.94e-08;3!UBERON:0000365;1.44e-07;5!UBERON:0000489;4.42e-07;29!UBERON:0001851;4.96e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.24e-18,14;UBERON:0000158,1.24e-18,14;UBERON:0003124,3.55e-16,7;UBERON:0004810,3.41e-14,10;UBERON:0006554,5.01e-14,47;UBERON:0001008,1.29e-13,48;UBERON:0004211,2.06e-13,15;UBERON:0009773,2.06e-13,15;UBERON:0001231,2.06e-13,15;UBERON:0001285,2.06e-13,15;UBERON:0007684,2.06e-13,15;UBERON:0004208,2.06e-13,15;UBERON:0006555,2.01e-12,16;UBERON:0004819,2.01e-12,16;UBERON:0000478,1.08e-11,24;UBERON:0001987,1.28e-09,4;UBERON:0004340,1.28e-09,4;UBERON:0001225,5.66e-09,12;UBERON:0008987,5.66e-09,12;UBERON:0000353,8.07e-09,15;UBERON:0000920,2.97e-08,3;UBERON:0002113,3.69e-08,26;UBERON:0003918,3.69e-08,26;UBERON:0011143,3.69e-08,26;UBERON:0005095,3.69e-08,26;UBERON:0007687,3.69e-08,26;UBERON:0001949,8.86e-08,3;UBERON:0000365,1.43e-07,5;UBERON:0001851,6.45e-07,15|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,4.66894479352867,1.39560233594486,53.5181361718922,48.0055900375785,0,0,2.6893005858071,1.20538905604795,1.46062018077475,1.46379839637152,0.123121058076788,0,0,0,0.547497700291537,0.502170558379211,0.0764134057479513,0,0,0,0,0.464448369948228,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,11.3638666022877,0,0,0,3.33037431286755,6.11278933531428,0.328875809207352,0.276350017785848,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77334191099179,0,0,3.7000132262574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,11.5956511897978,116.462593492286,14.3402297694502,0.121973706129595,0,0,0.725627385107593,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0.368965315629341,0,6.36551655370028,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0.790204397959275,0,0,0,0,378.684689306579,2461.77808875429,245.129143132086,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.3579870982933,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0.791951872933429,63.3022691825131,284.991440962296,112.569588070996,0,0,0,0,0,0,0.723906533337896,0,0.358121926479791,0.896681151948218,0,0,0,0.254094624222463,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=152816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26300 | |||
|TSSclassifier=N | |||
|UniProt=E7ETQ0 | |||
|association_with_transcript=0bp_to_ENST00000435974_5end | |||
|coexpression_cluster_id=C406 | |||
|description=CAGE_peak_1_at_C4orf26_5end | |||
|id=chr4:76481268..76481289,+ | |||
|ontology_enrichment_celltype=CL:1000497!1.39e-08!18;CL:0002518!1.39e-08!18;CL:1000507!2.47e-07!12;CL:1000494!2.47e-07!12;CL:1000449!2.66e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.46e-14;10!CL:1000494;2.46e-14;10!CL:1000497;6.44e-14;17!CL:0002518;6.44e-14;17!CL:1000449;1.53e-13;15!CL:0000349;4.83e-13;19!CL:0000244;1.72e-09;4!CL:0000731;1.72e-09;4!CL:0002681;4.03e-09;12!CL:0002584;4.03e-09;12!CL:0002166;1.95e-08;3!CL:0002541;2.96e-08;3!CL:0002621;8.94e-08;3!CL:0002577;1.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.41e-14,10;CL:1000494,3.41e-14,10;CL:1000497,7.09e-14,17;CL:0002518,7.09e-14,17;CL:1000449,2.06e-13,15;CL:0000349,4.94e-13,19;CL:0000244,1.71e-09,4;CL:0000731,1.71e-09,4;CL:0002681,5.66e-09,12;CL:0002584,5.66e-09,12;CL:0002166,1.95e-08,3;CL:0002541,2.97e-08,3;CL:0002621,8.86e-08,3;CL:0002577,1.38e-07,3;CL:0000066,2.32e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.92e-08!14;DOID:193!1.07e-07!29;DOID:120!1.83e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.28e-14;14!DOID:193;2.27e-08;29!DOID:120;1.20e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.72e-14,14;DOID:193,2.04e-08,29;DOID:120,1.09e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000478!2.08e-11!24;UBERON:0005631!7.76e-11!14;UBERON:0000158!7.76e-11!14;UBERON:0003124!7.43e-09!7;UBERON:0009773!2.47e-07!12;UBERON:0001231!2.47e-07!12;UBERON:0004810!2.47e-07!12;UBERON:0004211!2.66e-07!16;UBERON:0001285!2.66e-07!16;UBERON:0007684!2.66e-07!16;UBERON:0003220!2.66e-07!16;UBERON:0004208!2.66e-07!16;UBERON:0006554!8.84e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.46e-14;10!UBERON:0009773;2.46e-14;10!UBERON:0001231;2.46e-14;10!UBERON:0004810;2.46e-14;10!UBERON:0006555;1.53e-13;15!UBERON:0004819;1.53e-13;15!UBERON:0001285;1.53e-13;15!UBERON:0007684;1.53e-13;15!UBERON:0006554;2.56e-13;30!UBERON:0001008;2.56e-13;30!UBERON:0000478;1.06e-11;24!UBERON:0005631;3.35e-11;10!UBERON:0000158;3.35e-11;10!UBERON:0001987;1.23e-09;4!UBERON:0001225;4.03e-09;12!UBERON:0008987;4.03e-09;12!UBERON:0002113;4.43e-09;24!UBERON:0011143;4.43e-09;24!UBERON:0000353;5.80e-09;15!UBERON:0000486;1.50e-08;12!UBERON:0003124;2.96e-08;3!UBERON:0000920;2.96e-08;3!UBERON:0001949;8.94e-08;3!UBERON:0000365;1.44e-07;5!UBERON:0000489;4.42e-07;29!UBERON:0001851;4.96e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.24e-18,14;UBERON:0000158,1.24e-18,14;UBERON:0003124,3.55e-16,7;UBERON:0004810,3.41e-14,10;UBERON:0006554,5.01e-14,47;UBERON:0001008,1.29e-13,48;UBERON:0004211,2.06e-13,15;UBERON:0009773,2.06e-13,15;UBERON:0001231,2.06e-13,15;UBERON:0001285,2.06e-13,15;UBERON:0007684,2.06e-13,15;UBERON:0004208,2.06e-13,15;UBERON:0006555,2.01e-12,16;UBERON:0004819,2.01e-12,16;UBERON:0000478,1.08e-11,24;UBERON:0001987,1.28e-09,4;UBERON:0004340,1.28e-09,4;UBERON:0001225,5.66e-09,12;UBERON:0008987,5.66e-09,12;UBERON:0000353,8.07e-09,15;UBERON:0000920,2.97e-08,3;UBERON:0002113,3.69e-08,26;UBERON:0003918,3.69e-08,26;UBERON:0011143,3.69e-08,26;UBERON:0005095,3.69e-08,26;UBERON:0007687,3.69e-08,26;UBERON:0001949,8.86e-08,3;UBERON:0000365,1.43e-07,5;UBERON:0001851,6.45e-07,15 | |||
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| |||
|short_description=p1@C4orf26 | |||
}} |
Revision as of 11:44, 13 September 2013
Short description: | p1@C4orf26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C4orf26_5end |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | 0bp_to_ENST00000435974_5end |
EntrezGene: | C4orf26 |
HGNC: | 26300 |
UniProt: | E7ETQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.41e-14 | 10 |
nephron tubule epithelial cell | 3.41e-14 | 10 |
kidney cell | 7.09e-14 | 17 |
kidney epithelial cell | 7.09e-14 | 17 |
epithelial cell of nephron | 2.06e-13 | 15 |
extraembryonic cell | 4.94e-13 | 19 |
transitional epithelial cell | 1.71e-09 | 4 |
urothelial cell | 1.71e-09 | 4 |
kidney cortical cell | 5.66e-09 | 12 |
renal cortical epithelial cell | 5.66e-09 | 12 |
epithelial cell of Malassez | 1.95e-08 | 3 |
chorionic membrane mesenchymal stem cell | 2.97e-08 | 3 |
gingival epithelial cell | 8.86e-08 | 3 |
placental epithelial cell | 1.38e-07 | 3 |
epithelial cell | 2.32e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.24e-18 | 14 |
membranous layer | 1.24e-18 | 14 |
chorion | 3.55e-16 | 7 |
nephron tubule epithelium | 3.41e-14 | 10 |
urinary system structure | 5.01e-14 | 47 |
renal system | 1.29e-13 | 48 |
nephron epithelium | 2.06e-13 | 15 |
renal tubule | 2.06e-13 | 15 |
nephron tubule | 2.06e-13 | 15 |
nephron | 2.06e-13 | 15 |
uriniferous tubule | 2.06e-13 | 15 |
nephrogenic mesenchyme | 2.06e-13 | 15 |
excretory tube | 2.01e-12 | 16 |
kidney epithelium | 2.01e-12 | 16 |
extraembryonic structure | 1.08e-11 | 24 |
placenta | 1.28e-09 | 4 |
allantois | 1.28e-09 | 4 |
cortex of kidney | 5.66e-09 | 12 |
renal parenchyma | 5.66e-09 | 12 |
parenchyma | 8.07e-09 | 15 |
egg chorion | 2.97e-08 | 3 |
kidney | 3.69e-08 | 26 |
kidney mesenchyme | 3.69e-08 | 26 |
upper urinary tract | 3.69e-08 | 26 |
kidney rudiment | 3.69e-08 | 26 |
kidney field | 3.69e-08 | 26 |
gingival epithelium | 8.86e-08 | 3 |
urothelium | 1.43e-07 | 5 |
cortex | 6.45e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.72e-14 | 14 |
reproductive organ cancer | 2.04e-08 | 29 |
female reproductive organ cancer | 1.09e-07 | 27 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.