FFCP PHASE1:Mm9::chr19:23215446..23215457,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16601|HGNC=|MCL_coexpression_id=3177|UniProt=Q8CEC4|association_with_transcript=-258bp_to_ENSMUST00000036884,NM_010638,uc008gzz.1_5end|description=CAGE_peak_8_at_Klf9_5end|id=chr19:23215446..23215457,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!4.10e-10!50;UBERON:0006238!4.10e-10!50;UBERON:0000033!4.77e-10!63;UBERON:0002616!1.45e-09!49;UBERON:0001049!1.75e-08!52;UBERON:0005068!1.75e-08!52;UBERON:0006241!1.75e-08!52;UBERON:0007135!1.75e-08!52;UBERON:0004121!3.87e-08!102;UBERON:0000924!3.87e-08!102;UBERON:0006601!3.87e-08!102;UBERON:0004111!1.16e-07!122;UBERON:0000025!2.26e-07!114;UBERON:0002021!2.26e-07!10;UBERON:0000411!2.26e-07!10;UBERON:0001950!2.26e-07!10;UBERON:0002346!3.83e-07!71;UBERON:0003075!3.83e-07!71;UBERON:0007284!3.83e-07!71;UBERON:0000073!7.02e-07!75;UBERON:0001016!7.02e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.36e-13,54;UBERON:0002021,1.38e-12,10;UBERON:0000411,1.38e-12,10;UBERON:0001950,1.38e-12,10;UBERON:0000955,1.84e-12,47;UBERON:0006238,1.84e-12,47;UBERON:0002616,2.57e-11,46;UBERON:0001017,5.37e-10,73;UBERON:0004121,1.19e-09,95;UBERON:0000924,1.19e-09,95;UBERON:0006601,1.19e-09,95;UBERON:0001016,1.43e-09,75;UBERON:0001049,1.85e-09,52;UBERON:0005068,1.85e-09,52;UBERON:0006241,1.85e-09,52;UBERON:0007135,1.85e-09,52;UBERON:0002346,1.08e-08,64;UBERON:0003075,1.08e-08,64;UBERON:0007284,1.08e-08,64;UBERON:0002619,1.52e-08,17;UBERON:0003080,3.50e-08,40;UBERON:0010314,3.64e-08,92;UBERON:0000956,3.86e-08,21;UBERON:0001869,3.86e-08,21;UBERON:0000203,3.86e-08,21;UBERON:0003056,5.39e-08,49;UBERON:0010371,8.17e-08,73;UBERON:0002780,2.64e-07,39;UBERON:0001890,2.64e-07,39;UBERON:0006240,2.64e-07,39;UBERON:0000025,5.48e-07,114;UBERON:0004111,7.54e-07,122|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0.30246421130683,1.00179145989269,0.33575854382378,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0.666219523631325,0,0,0.157731082679119,0.137114433605739,0,1.10556277196391,0,0,0.159992422793407,0,0,0,0.430942465371778,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0.503587271902309,0.304130793658544,0.183546752161682,0.782391344348039,0.218025156380447,0,0.972149495371417,1.25987779462826,0,0.167782606057736,0,0,1.02903774414379,0.85960031981627,2.06268836910977,0,0,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0,0.285650984403804,0.883474163806454,0,0,0.919218786610021,2.20231761998777,1.65993539510744,2.76491759861238,0,0,0,0.558365998002762,0.56276261003168,0.61119299110724,0.294628585473668,0.142371680799103,0.186399445825301,0.454357159999104,0.453429360640713,3.18850937571846,0.860423876981386,0,0,2.59910566979068,0.896053774194671,0.561777680527007,0.340860645156116,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0.587943535678524,0.753999547978053,0.494389935468748,3.61498392299779,0,0.161766849947409,0.662524555381181,0,0,3.22058876712702,1.46612694769419,0.510914110417183,0.11981512450592,0,0,1.9472783122627,8.6925114535539,0.376963056338593,2.43354048269187,4.09144731728529,2.0778804455956,2.92034273521964,0.611036183101898,0.248813941220186,0,1.68353484709179,0.130120442962704,0,0.180062129805349,0.150704817835715,0.340182495756639,0,0.374806898238915,1.55222022443409,0,0,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0.804820204198858,0.233530684734339,0.16455984991348,0.32833492815819,2.02672023864639,1.60819986167866,0.878200461164203,2.01309628140558,2.52347938276953,0.102904612379284,0.991256348951394,0,0,0,0,0.403367049246685,0,0.570676878337677,0,0,0.251335208800269,0.596869416123452,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0.140271639780637,0.505892296994058,0.885660887877613,0.470996183524124,0.370191491765402,0.592905254174298,0.166845105716094,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0.757736633841335,0.358794827043824,0.964887042726734,0.739012760666419,0,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0,0,0.44292937929755,0.318909537314974,0.983179888294428,0.172684981865896,0.723245292907558,0,0,0,0.551873492609465,1.12385412991454,1.40654023910644,0.163934945376675,2.01976741763498,0,0,0.430846795465598,0,0,0.566153061577665,0,0,0.395287777946524,2.89189184779626,0.425820255624806,0,0.325773918707152,1.97964147567043,0,0,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0.948110273807448,4.21674434299995,2.06271086496374,0.680879211507576,0,0.129358683782755,0.214337035031592,0.354680467284547,0.356737635204141,0.987294123612726,1.2178597964584,0.704015124191131,0.63549621259146,0.441056796109924,0.98931751764888,1.13025098687134,0.361877549568935,0.358117032009409,0.164140899745061,1.1659233465194,0.741701208042039,0,0,0,0,0,0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| ||
|EntrezGene=16601 | |||
|HGNC= | |||
|MCL_coexpression_id=3177 | |||
|UniProt=Q8CEC4 | |||
|association_with_transcript=-258bp_to_ENSMUST00000036884,NM_010638,uc008gzz.1_5end | |||
|description=CAGE_peak_8_at_Klf9_5end | |||
|id=chr19:23215446..23215457,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!4.10e-10!50;UBERON:0006238!4.10e-10!50;UBERON:0000033!4.77e-10!63;UBERON:0002616!1.45e-09!49;UBERON:0001049!1.75e-08!52;UBERON:0005068!1.75e-08!52;UBERON:0006241!1.75e-08!52;UBERON:0007135!1.75e-08!52;UBERON:0004121!3.87e-08!102;UBERON:0000924!3.87e-08!102;UBERON:0006601!3.87e-08!102;UBERON:0004111!1.16e-07!122;UBERON:0000025!2.26e-07!114;UBERON:0002021!2.26e-07!10;UBERON:0000411!2.26e-07!10;UBERON:0001950!2.26e-07!10;UBERON:0002346!3.83e-07!71;UBERON:0003075!3.83e-07!71;UBERON:0007284!3.83e-07!71;UBERON:0000073!7.02e-07!75;UBERON:0001016!7.02e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.36e-13,54;UBERON:0002021,1.38e-12,10;UBERON:0000411,1.38e-12,10;UBERON:0001950,1.38e-12,10;UBERON:0000955,1.84e-12,47;UBERON:0006238,1.84e-12,47;UBERON:0002616,2.57e-11,46;UBERON:0001017,5.37e-10,73;UBERON:0004121,1.19e-09,95;UBERON:0000924,1.19e-09,95;UBERON:0006601,1.19e-09,95;UBERON:0001016,1.43e-09,75;UBERON:0001049,1.85e-09,52;UBERON:0005068,1.85e-09,52;UBERON:0006241,1.85e-09,52;UBERON:0007135,1.85e-09,52;UBERON:0002346,1.08e-08,64;UBERON:0003075,1.08e-08,64;UBERON:0007284,1.08e-08,64;UBERON:0002619,1.52e-08,17;UBERON:0003080,3.50e-08,40;UBERON:0010314,3.64e-08,92;UBERON:0000956,3.86e-08,21;UBERON:0001869,3.86e-08,21;UBERON:0000203,3.86e-08,21;UBERON:0003056,5.39e-08,49;UBERON:0010371,8.17e-08,73;UBERON:0002780,2.64e-07,39;UBERON:0001890,2.64e-07,39;UBERON:0006240,2.64e-07,39;UBERON:0000025,5.48e-07,114;UBERON:0004111,7.54e-07,122 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0.30246421130683,1.00179145989269,0.33575854382378,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0.666219523631325,0,0,0.157731082679119,0.137114433605739,0,1.10556277196391,0,0,0.159992422793407,0,0,0,0.430942465371778,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0.503587271902309,0.304130793658544,0.183546752161682,0.782391344348039,0.218025156380447,0,0.972149495371417,1.25987779462826,0,0.167782606057736,0,0,1.02903774414379,0.85960031981627,2.06268836910977,0,0,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0,0.285650984403804,0.883474163806454,0,0,0.919218786610021,2.20231761998777,1.65993539510744,2.76491759861238,0,0,0,0.558365998002762,0.56276261003168,0.61119299110724,0.294628585473668,0.142371680799103,0.186399445825301,0.454357159999104,0.453429360640713,3.18850937571846,0.860423876981386,0,0,2.59910566979068,0.896053774194671,0.561777680527007,0.340860645156116,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0.587943535678524,0.753999547978053,0.494389935468748,3.61498392299779,0,0.161766849947409,0.662524555381181,0,0,3.22058876712702,1.46612694769419,0.510914110417183,0.11981512450592,0,0,1.9472783122627,8.6925114535539,0.376963056338593,2.43354048269187,4.09144731728529,2.0778804455956,2.92034273521964,0.611036183101898,0.248813941220186,0,1.68353484709179,0.130120442962704,0,0.180062129805349,0.150704817835715,0.340182495756639,0,0.374806898238915,1.55222022443409,0,0,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0.804820204198858,0.233530684734339,0.16455984991348,0.32833492815819,2.02672023864639,1.60819986167866,0.878200461164203,2.01309628140558,2.52347938276953,0.102904612379284,0.991256348951394,0,0,0,0,0.403367049246685,0,0.570676878337677,0,0,0.251335208800269,0.596869416123452,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0.140271639780637,0.505892296994058,0.885660887877613,0.470996183524124,0.370191491765402,0.592905254174298,0.166845105716094,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0.757736633841335,0.358794827043824,0.964887042726734,0.739012760666419,0,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0,0,0.44292937929755,0.318909537314974,0.983179888294428,0.172684981865896,0.723245292907558,0,0,0,0.551873492609465,1.12385412991454,1.40654023910644,0.163934945376675,2.01976741763498,0,0,0.430846795465598,0,0,0.566153061577665,0,0,0.395287777946524,2.89189184779626,0.425820255624806,0,0.325773918707152,1.97964147567043,0,0,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0.948110273807448,4.21674434299995,2.06271086496374,0.680879211507576,0,0.129358683782755,0.214337035031592,0.354680467284547,0.356737635204141,0.987294123612726,1.2178597964584,0.704015124191131,0.63549621259146,0.441056796109924,0.98931751764888,1.13025098687134,0.361877549568935,0.358117032009409,0.164140899745061,1.1659233465194,0.741701208042039,0,0,0,0,0,0.228778173206523,0.169978429993855,0.419854356970974,0.414599921413271,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.523511883968059,0.388844919875379,3.10669656543463,0,0,0,0.194451188344048,0,0.168956125490778,0,0.39061315453185,0.838874755405687,0.724752362478018,0.864090018773596,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0.192423683280659,0.350630706544707,0.680191150845634,0.221985953374065,0.269141569828427,0.167884616364078,0,1.31377732815827,0.183151624267265,0.643105137237198,0,2.82375921308533,0.920650473014354,7.44764167471216,2.40594455281163,2.74033007908257,0.755393897389701,1.35004500046361,2.70192721934532,5.89085131679466,4.14208249401456,0,0,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0.206035057238894,1.28367683836726,1.01078884705519,0.25347929989024,0.377252682772152,0.187283014939765,0.512201219238954,0.17230640686684,0.476293691283074,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0.238436189947321,0.436039249896986,0.0941093804153306,0.25384382367503,0.548783918618318,0.263069711437843,0.135804113845862,0,0.237270036248348,0.394017929502254,0,0.309873682371932,0,0,0,1.07435527024149,0.956441660344217,0.220591419119515,0 | |||
|short_description=p8@Klf9 | |||
}} |
Revision as of 17:13, 13 September 2013
Short description: | p8@Klf9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Klf9_5end |
Coexpression cluster: | MCL_coexpression_mm9:3177 |
Association with transcript: | -258bp_to_ENSMUST00000036884, NM_010638, uc008gzz.1_5end |
EntrezGene: | Klf9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 9.36e-13 | 54 |
occipital lobe | 1.38e-12 | 10 |
visual cortex | 1.38e-12 | 10 |
neocortex | 1.38e-12 | 10 |
brain | 1.84e-12 | 47 |
future brain | 1.84e-12 | 47 |
regional part of brain | 2.57e-11 | 46 |
central nervous system | 5.37e-10 | 73 |
ectoderm-derived structure | 1.19e-09 | 95 |
ectoderm | 1.19e-09 | 95 |
presumptive ectoderm | 1.19e-09 | 95 |
nervous system | 1.43e-09 | 75 |
neural tube | 1.85e-09 | 52 |
neural rod | 1.85e-09 | 52 |
future spinal cord | 1.85e-09 | 52 |
neural keel | 1.85e-09 | 52 |
neurectoderm | 1.08e-08 | 64 |
neural plate | 1.08e-08 | 64 |
presumptive neural plate | 1.08e-08 | 64 |
regional part of cerebral cortex | 1.52e-08 | 17 |
anterior neural tube | 3.50e-08 | 40 |
structure with developmental contribution from neural crest | 3.64e-08 | 92 |
cerebral cortex | 3.86e-08 | 21 |
cerebral hemisphere | 3.86e-08 | 21 |
pallium | 3.86e-08 | 21 |
pre-chordal neural plate | 5.39e-08 | 49 |
ecto-epithelium | 8.17e-08 | 73 |
regional part of forebrain | 2.64e-07 | 39 |
forebrain | 2.64e-07 | 39 |
future forebrain | 2.64e-07 | 39 |
tube | 5.48e-07 | 114 |
anatomical conduit | 7.54e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.