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FFCP PHASE1:Mm9::chr1:169528520..169528542,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20183|HGNC=|MCL_coexpression_id=1177|UniProt=P28705|association_with_transcript=5bp_to_ENSMUST00000015987_5end|description=CAGE_peak_2_at_Rxrg_5end|id=chr1:169528520..169528542,+|ontology_enrichment_celltype=CL:0000117!1.58e-09!23;CL:0000337!1.58e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.88e-08,23;CL:0000337,4.88e-08,23;CL:0002608,3.35e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.08e-14!52;UBERON:0005068!2.08e-14!52;UBERON:0006241!2.08e-14!52;UBERON:0007135!2.08e-14!52;UBERON:0000033!7.59e-14!63;UBERON:0003056!9.60e-14!49;UBERON:0002346!1.13e-12!71;UBERON:0003075!1.13e-12!71;UBERON:0007284!1.13e-12!71;UBERON:0003080!1.06e-11!40;UBERON:0000955!1.50e-11!50;UBERON:0006238!1.50e-11!50;UBERON:0002780!4.32e-11!39;UBERON:0001890!4.32e-11!39;UBERON:0006240!4.32e-11!39;UBERON:0002616!4.99e-11!49;UBERON:0004121!6.42e-10!102;UBERON:0000924!6.42e-10!102;UBERON:0006601!6.42e-10!102;UBERON:0001017!7.21e-10!73;UBERON:0005743!7.21e-10!73;UBERON:0000073!1.19e-09!75;UBERON:0001016!1.19e-09!75;UBERON:0000153!1.55e-08!94;UBERON:0002020!1.88e-08!34;UBERON:0007811!3.98e-08!86;UBERON:0001894!6.17e-08!10;UBERON:0006222!6.17e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.06e-18,64;UBERON:0003075,1.06e-18,64;UBERON:0007284,1.06e-18,64;UBERON:0010371,2.87e-18,73;UBERON:0001049,9.18e-18,52;UBERON:0005068,9.18e-18,52;UBERON:0006241,9.18e-18,52;UBERON:0007135,9.18e-18,52;UBERON:0010314,2.12e-17,92;UBERON:0003056,1.27e-15,49;UBERON:0000073,1.93e-15,54;UBERON:0001894,5.21e-15,10;UBERON:0006222,5.21e-15,10;UBERON:0003080,1.49e-13,40;UBERON:0004121,3.68e-13,95;UBERON:0000924,3.68e-13,95;UBERON:0006601,3.68e-13,95;UBERON:0001017,6.72e-13,73;UBERON:0002780,1.93e-12,39;UBERON:0001890,1.93e-12,39;UBERON:0006240,1.93e-12,39;UBERON:0001016,2.30e-12,75;UBERON:0000955,4.95e-12,47;UBERON:0006238,4.95e-12,47;UBERON:0000007,1.39e-11,8;UBERON:0003296,1.39e-11,8;UBERON:0010133,1.39e-11,8;UBERON:0002616,4.08e-11,46;UBERON:0002240,5.45e-11,6;UBERON:0005174,5.45e-11,6;UBERON:0001137,5.45e-11,6;UBERON:0001948,8.91e-10,5;UBERON:0002315,8.91e-10,5;UBERON:0002020,2.54e-08,34;UBERON:0004111,1.18e-07,122;UBERON:0000025,3.83e-07,114|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,1.71390590642282,2.65042249141936,10.0442455356262,8.53024692062304,11.9498442259303,0,0.893811366596314,0.768032666281217,1.31886287730194,0.640413505216868,0.52091337055676,0.837548997004143,2.25105044012672,1.22238598221448,3.24091444021034,1.99320353118744,2.05039390407831,0,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,3.09855523508697,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0.173485326766136,0,0,0.301445281105245,0,0,0,0,0,0.485300549842228,0.220841518460394,0,0,0,0.628340120440365,0,0,0,0,1.64769703345305,23.7900313465686,31.0366249718775,3.47648640384553,2.81287003063364,2.49345653471472,6.97637431191358,0,0.248813941220186,0,0,0,1.60931473103431,2.16074555766419,0.60281927134286,1.7009124787832,1.0249097622788,0.374806898238915,0.517406741478031,0,0.378212160335639,0,0.43839146485515,0.278047249225598,0,0.61734640922383,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0,0.233530684734339,0.493679549740441,0.820837320395476,1.21603214318784,1.46199987425332,1.3173006917463,1.34206418760372,0.841159794256509,0.720332286654991,0,0,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0,0,0,1.1270773567308,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.44292937929755,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,1.76729649043061,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0.178065603667255,0,0,0,0.971122544619926,0.302323556964751,0.377210159511796,0.590603785761546,0.307435147943927,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,10.8940673841212,0.18006109403131,1.03486947026204,1.50035924522115,15.0739198595933,11.2372355089304,7.24015690649332,4.56697423671899,0,0,0,0.16488625294148,0.484393280087717,0.0603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,1.11255181206306,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0.443068581523732,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.579568782096571,0,0.36630324853453,0,0,0,0.460325236507177,0,0,0,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0.207574695168353,0.399024873401031,0.853668028770671,0.729320151204882,0.628839487883947,1.10306105070008,1.33348036680969,0.618105171716683,0.320919209591815,0.505394423527595,1.01391719956096,0.943131706930381,0.655490552289177,0.576226371643824,0.516919220600519,0.476293691283074,0.579421629724277,0.578727661391115,0,1.47198920134397,1.02860775715625,0.354951612318675,0.953744759789284,0.872078499793971,1.31753132581463,0.930760686808441,1.09756783723664,1.05227884575137,0.407412341537585,0.561142271657738,1.06771516311757,0.591026894253381,0,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,1.28922632428979,0,0,1.62307484934295|short_description=p2@Rxrg}}
|EntrezGene=20183
|HGNC=
|MCL_coexpression_id=1177
|UniProt=P28705
|association_with_transcript=5bp_to_ENSMUST00000015987_5end
|description=CAGE_peak_2_at_Rxrg_5end
|id=chr1:169528520..169528542,+
|ontology_enrichment_celltype=CL:0000117!1.58e-09!23;CL:0000337!1.58e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.88e-08,23;CL:0000337,4.88e-08,23;CL:0002608,3.35e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.08e-14!52;UBERON:0005068!2.08e-14!52;UBERON:0006241!2.08e-14!52;UBERON:0007135!2.08e-14!52;UBERON:0000033!7.59e-14!63;UBERON:0003056!9.60e-14!49;UBERON:0002346!1.13e-12!71;UBERON:0003075!1.13e-12!71;UBERON:0007284!1.13e-12!71;UBERON:0003080!1.06e-11!40;UBERON:0000955!1.50e-11!50;UBERON:0006238!1.50e-11!50;UBERON:0002780!4.32e-11!39;UBERON:0001890!4.32e-11!39;UBERON:0006240!4.32e-11!39;UBERON:0002616!4.99e-11!49;UBERON:0004121!6.42e-10!102;UBERON:0000924!6.42e-10!102;UBERON:0006601!6.42e-10!102;UBERON:0001017!7.21e-10!73;UBERON:0005743!7.21e-10!73;UBERON:0000073!1.19e-09!75;UBERON:0001016!1.19e-09!75;UBERON:0000153!1.55e-08!94;UBERON:0002020!1.88e-08!34;UBERON:0007811!3.98e-08!86;UBERON:0001894!6.17e-08!10;UBERON:0006222!6.17e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.06e-18,64;UBERON:0003075,1.06e-18,64;UBERON:0007284,1.06e-18,64;UBERON:0010371,2.87e-18,73;UBERON:0001049,9.18e-18,52;UBERON:0005068,9.18e-18,52;UBERON:0006241,9.18e-18,52;UBERON:0007135,9.18e-18,52;UBERON:0010314,2.12e-17,92;UBERON:0003056,1.27e-15,49;UBERON:0000073,1.93e-15,54;UBERON:0001894,5.21e-15,10;UBERON:0006222,5.21e-15,10;UBERON:0003080,1.49e-13,40;UBERON:0004121,3.68e-13,95;UBERON:0000924,3.68e-13,95;UBERON:0006601,3.68e-13,95;UBERON:0001017,6.72e-13,73;UBERON:0002780,1.93e-12,39;UBERON:0001890,1.93e-12,39;UBERON:0006240,1.93e-12,39;UBERON:0001016,2.30e-12,75;UBERON:0000955,4.95e-12,47;UBERON:0006238,4.95e-12,47;UBERON:0000007,1.39e-11,8;UBERON:0003296,1.39e-11,8;UBERON:0010133,1.39e-11,8;UBERON:0002616,4.08e-11,46;UBERON:0002240,5.45e-11,6;UBERON:0005174,5.45e-11,6;UBERON:0001137,5.45e-11,6;UBERON:0001948,8.91e-10,5;UBERON:0002315,8.91e-10,5;UBERON:0002020,2.54e-08,34;UBERON:0004111,1.18e-07,122;UBERON:0000025,3.83e-07,114
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,1.71390590642282,2.65042249141936,10.0442455356262,8.53024692062304,11.9498442259303,0,0.893811366596314,0.768032666281217,1.31886287730194,0.640413505216868,0.52091337055676,0.837548997004143,2.25105044012672,1.22238598221448,3.24091444021034,1.99320353118744,2.05039390407831,0,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,3.09855523508697,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0.173485326766136,0,0,0.301445281105245,0,0,0,0,0,0.485300549842228,0.220841518460394,0,0,0,0.628340120440365,0,0,0,0,1.64769703345305,23.7900313465686,31.0366249718775,3.47648640384553,2.81287003063364,2.49345653471472,6.97637431191358,0,0.248813941220186,0,0,0,1.60931473103431,2.16074555766419,0.60281927134286,1.7009124787832,1.0249097622788,0.374806898238915,0.517406741478031,0,0.378212160335639,0,0.43839146485515,0.278047249225598,0,0.61734640922383,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0,0.233530684734339,0.493679549740441,0.820837320395476,1.21603214318784,1.46199987425332,1.3173006917463,1.34206418760372,0.841159794256509,0.720332286654991,0,0,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0,0,0,1.1270773567308,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.44292937929755,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,1.76729649043061,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0.178065603667255,0,0,0,0.971122544619926,0.302323556964751,0.377210159511796,0.590603785761546,0.307435147943927,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,10.8940673841212,0.18006109403131,1.03486947026204,1.50035924522115,15.0739198595933,11.2372355089304,7.24015690649332,4.56697423671899,0,0,0,0.16488625294148,0.484393280087717,0.0603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,1.11255181206306,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0.443068581523732,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.579568782096571,0,0.36630324853453,0,0,0,0.460325236507177,0,0,0,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0.207574695168353,0.399024873401031,0.853668028770671,0.729320151204882,0.628839487883947,1.10306105070008,1.33348036680969,0.618105171716683,0.320919209591815,0.505394423527595,1.01391719956096,0.943131706930381,0.655490552289177,0.576226371643824,0.516919220600519,0.476293691283074,0.579421629724277,0.578727661391115,0,1.47198920134397,1.02860775715625,0.354951612318675,0.953744759789284,0.872078499793971,1.31753132581463,0.930760686808441,1.09756783723664,1.05227884575137,0.407412341537585,0.561142271657738,1.06771516311757,0.591026894253381,0,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,1.28922632428979,0,0,1.62307484934295
|short_description=p2@Rxrg
}}

Revision as of 19:35, 13 September 2013

Short description:p2@Rxrg
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rxrg_5end
Coexpression cluster:MCL_coexpression_mm9:1177
Association with transcript: 5bp_to_ENSMUST00000015987_5end
EntrezGene:Rxrg
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Rxrg

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D823.79
corpus striatum, neonate N00.CNhs11226.630-43F131.04
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G810.89
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B915.07
pituitary gland, embryo E16.CNhs11036.449-43F611.24
pituitary gland, embryo E17.CNhs11039.1265-44F57.24
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.88e-0823
neuroblast (sensu Vertebrata)4.88e-0823
hippocampal neuron3.35e-073

Uber anatomy
Ontology termp-valuen
neurectoderm1.06e-1864
neural plate1.06e-1864
presumptive neural plate1.06e-1864
ecto-epithelium2.87e-1873
neural tube9.18e-1852
neural rod9.18e-1852
future spinal cord9.18e-1852
neural keel9.18e-1852
structure with developmental contribution from neural crest2.12e-1792
pre-chordal neural plate1.27e-1549
regional part of nervous system1.93e-1554
diencephalon5.21e-1510
future diencephalon5.21e-1510
anterior neural tube1.49e-1340
ectoderm-derived structure3.68e-1395
ectoderm3.68e-1395
presumptive ectoderm3.68e-1395
central nervous system6.72e-1373
regional part of forebrain1.93e-1239
forebrain1.93e-1239
future forebrain1.93e-1239
nervous system2.30e-1275
brain4.95e-1247
future brain4.95e-1247
pituitary gland1.39e-118
gland of diencephalon1.39e-118
neuroendocrine gland1.39e-118
regional part of brain4.08e-1146
spinal cord5.45e-116
dorsal region element5.45e-116
dorsum5.45e-116
regional part of spinal cord8.91e-105
gray matter of spinal cord8.91e-105
gray matter2.54e-0834
anatomical conduit1.18e-07122
tube3.83e-07114







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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