FFCP PHASE1:Hg19::chr6:36973449..36973454,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=221472|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3664|TSSclassifier=S|UniProt=|association_with_transcript=15bp_to_ENST00000459781_5end|coexpression_cluster_id=C780|description=CAGE_peak_4_at_FGD2_5end|id=chr6:36973449..36973454,+|ontology_enrichment_celltype=CL:0000738!5.51e-74!140;CL:0002087!1.15e-69!119;CL:0002031!2.11e-63!124;CL:0000037!7.17e-61!172;CL:0000566!7.17e-61!172;CL:0002009!8.23e-60!65;CL:0002194!1.29e-57!63;CL:0000576!1.29e-57!63;CL:0000040!1.29e-57!63;CL:0000559!1.29e-57!63;CL:0000557!7.85e-57!71;CL:0002032!1.52e-56!165;CL:0000837!1.52e-56!165;CL:0000988!1.28e-55!182;CL:0000766!4.05e-52!76;CL:0000839!1.90e-51!70;CL:0002057!1.35e-50!42;CL:0000860!4.13e-46!45;CL:0000763!1.46e-41!112;CL:0000049!1.46e-41!112;CL:0000945!1.11e-23!24;CL:0000826!1.11e-23!24;CL:0000236!1.90e-17!14;CL:0000451!6.00e-14!10;CL:0002393!2.32e-13!9;CL:0002397!2.32e-13!9;CL:0000134!5.06e-13!358;CL:0000542!7.27e-13!53;CL:0000051!7.27e-13!53;CL:0002320!3.16e-12!365;CL:0000838!3.46e-12!52;CL:0000990!2.16e-11!8;CL:0000219!1.69e-09!390;CL:0000840!8.43e-09!5;CL:0001029!8.43e-09!5;CL:0000048!9.01e-07!430|ontology_enrichment_celltype_v019=CL:0000576;4.75e-58;48!CL:0000860;1.25e-56;33!CL:0002057;1.25e-56;33!CL:0000473;6.56e-48;39!CL:0000234;6.56e-48;39!CL:0000766;4.04e-38;69!CL:0000236;4.30e-24;13!CL:0002087;1.45e-22;104!CL:0000738;1.54e-21;136!CL:0000763;2.42e-18;100!CL:0002393;4.38e-17;6!CL:0002397;4.38e-17;6!CL:0000451;7.05e-15;10!CL:0000945;5.06e-14;24!CL:0000988;8.29e-12;177!CL:0000840;1.54e-11;5!CL:0000990;2.08e-10;8!CL:0000875;7.44e-10;3!CL:0002396;7.44e-10;3!CL:0000784;2.13e-09;3!CL:0000219;2.40e-09;193!CL:0000767;1.01e-08;3!CL:0002619;1.69e-08;3!CL:0000226;6.02e-08;3!CL:0000842;6.02e-08;3|ontology_enrichment_celltype_v019_2=CL:0002009,8.97e-100,61;CL:0002194,2.68e-99,59;CL:0000576,2.68e-99,59;CL:0000040,2.68e-99,59;CL:0000559,2.68e-99,59;CL:0000557,2.04e-93,67;CL:0000766,2.71e-90,72;CL:0000839,1.65e-87,66;CL:0000738,3.47e-87,136;CL:0000473,5.29e-87,48;CL:0000234,5.29e-87,48;CL:0000860,7.58e-87,42;CL:0002057,7.58e-87,42;CL:0002087,8.77e-84,115;CL:0002031,1.81e-74,120;CL:0000037,9.63e-70,168;CL:0000988,2.16e-65,177;CL:0000763,4.91e-63,108;CL:0000049,4.91e-63,108;CL:0002032,4.83e-62,161;CL:0000837,4.83e-62,161;CL:0002393,5.36e-25,9;CL:0002397,5.36e-25,9;CL:0000134,1.36e-24,354;CL:0002320,8.49e-24,361;CL:0000236,1.80e-22,14;CL:0000219,5.39e-21,386;CL:0000048,1.44e-17,427;CL:0000723,4.28e-17,433;CL:0000034,1.75e-16,441;CL:0000451,5.47e-15,10;CL:0000945,2.79e-14,24;CL:0000826,2.79e-14,24;CL:0000840,9.62e-12,5;CL:0001029,9.62e-12,5;CL:0000990,1.82e-10,8;CL:0000875,7.38e-10,3;CL:0002396,7.38e-10,3;CL:0000784,1.72e-09,3;CL:0000767,7.71e-09,3;CL:0002619,1.03e-08,3;CL:0000226,7.48e-08,3;CL:0000842,7.48e-08,3|ontology_enrichment_development_v019=CL:0002057;2.59e-63;42!CL:0000049;2.45e-20;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.46e-55!102;UBERON:0003061!9.46e-55!102;UBERON:0002193!7.23e-51!112;UBERON:0002371!5.77e-48!80;UBERON:0001474!4.25e-43!86;UBERON:0002405!7.55e-37!115;UBERON:0004765!1.08e-34!101;UBERON:0001434!1.08e-34!101;UBERON:0003081!2.90e-18!216;UBERON:0002204!2.01e-14!167;UBERON:0002384!1.30e-11!375;UBERON:0007023!1.41e-09!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.11e-81,76;UBERON:0002390,4.62e-76,98;UBERON:0003061,4.62e-76,98;UBERON:0001474,5.02e-74,82;UBERON:0002405,4.64e-72,93;UBERON:0002193,2.28e-70,108;UBERON:0004765,2.67e-66,90;UBERON:0001434,2.29e-58,100;UBERON:0003081,1.21e-30,203;UBERON:0002204,1.23e-29,167;UBERON:0002384,1.03e-22,371;UBERON:0000926,1.20e-14,315;UBERON:0004120,1.20e-14,315;UBERON:0006603,1.20e-14,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.492603536699674,0.708397031823113,3.14691421479123,1.91914699048606,2.32224184974114,0,0,0,0.542270404062111,0.995184627411951,0,2.21598163412751,2.00544447470142,2.17010870715852,1.56740831967947,4.21061765824673,1.80302897343931,2.18097358169347,3.77875943688809,2.66842467306598,2.55671940596253,1.23350366406548,0.309706370895104,1.43846196161075,2.30544635876191,1.41889337933151,2.06847408441971,1.29096936716765,1.35426486594342,2.25890807451126,1.09162460023138,1.34834090667051,1.53041946185451,3.20929027076094,1.27867425159808,1.9791078011203,3.59034583718937,1.27867425159808,1.45104619314292,0.56738522469114,0.622822248995575,2.51248665256743,1.5644487552606,1.73751075764093,1.81619850790011,1.10483290796269,2.53169909952708,5.28138215779854,7.01594189884644,5.03180749220102,3.93150209012733,2.70318407114711,3.2145117339416,7.41033133727246,5.9675003159727,4.20127553658658,5.27988733383968,4.36910889009705,1.77901850772711,2.13365111283254,3.60356388332411,3.4485146397269,1.98313461835459,4.77026877267682,2.84606484554724,4.11066032559657,3.44045905312706,0,0,0.263384084775077,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=221472 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3664 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=15bp_to_ENST00000459781_5end | |||
|coexpression_cluster_id=C780 | |||
|description=CAGE_peak_4_at_FGD2_5end | |||
|id=chr6:36973449..36973454,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.51e-74!140;CL:0002087!1.15e-69!119;CL:0002031!2.11e-63!124;CL:0000037!7.17e-61!172;CL:0000566!7.17e-61!172;CL:0002009!8.23e-60!65;CL:0002194!1.29e-57!63;CL:0000576!1.29e-57!63;CL:0000040!1.29e-57!63;CL:0000559!1.29e-57!63;CL:0000557!7.85e-57!71;CL:0002032!1.52e-56!165;CL:0000837!1.52e-56!165;CL:0000988!1.28e-55!182;CL:0000766!4.05e-52!76;CL:0000839!1.90e-51!70;CL:0002057!1.35e-50!42;CL:0000860!4.13e-46!45;CL:0000763!1.46e-41!112;CL:0000049!1.46e-41!112;CL:0000945!1.11e-23!24;CL:0000826!1.11e-23!24;CL:0000236!1.90e-17!14;CL:0000451!6.00e-14!10;CL:0002393!2.32e-13!9;CL:0002397!2.32e-13!9;CL:0000134!5.06e-13!358;CL:0000542!7.27e-13!53;CL:0000051!7.27e-13!53;CL:0002320!3.16e-12!365;CL:0000838!3.46e-12!52;CL:0000990!2.16e-11!8;CL:0000219!1.69e-09!390;CL:0000840!8.43e-09!5;CL:0001029!8.43e-09!5;CL:0000048!9.01e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.75e-58;48!CL:0000860;1.25e-56;33!CL:0002057;1.25e-56;33!CL:0000473;6.56e-48;39!CL:0000234;6.56e-48;39!CL:0000766;4.04e-38;69!CL:0000236;4.30e-24;13!CL:0002087;1.45e-22;104!CL:0000738;1.54e-21;136!CL:0000763;2.42e-18;100!CL:0002393;4.38e-17;6!CL:0002397;4.38e-17;6!CL:0000451;7.05e-15;10!CL:0000945;5.06e-14;24!CL:0000988;8.29e-12;177!CL:0000840;1.54e-11;5!CL:0000990;2.08e-10;8!CL:0000875;7.44e-10;3!CL:0002396;7.44e-10;3!CL:0000784;2.13e-09;3!CL:0000219;2.40e-09;193!CL:0000767;1.01e-08;3!CL:0002619;1.69e-08;3!CL:0000226;6.02e-08;3!CL:0000842;6.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,8.97e-100,61;CL:0002194,2.68e-99,59;CL:0000576,2.68e-99,59;CL:0000040,2.68e-99,59;CL:0000559,2.68e-99,59;CL:0000557,2.04e-93,67;CL:0000766,2.71e-90,72;CL:0000839,1.65e-87,66;CL:0000738,3.47e-87,136;CL:0000473,5.29e-87,48;CL:0000234,5.29e-87,48;CL:0000860,7.58e-87,42;CL:0002057,7.58e-87,42;CL:0002087,8.77e-84,115;CL:0002031,1.81e-74,120;CL:0000037,9.63e-70,168;CL:0000988,2.16e-65,177;CL:0000763,4.91e-63,108;CL:0000049,4.91e-63,108;CL:0002032,4.83e-62,161;CL:0000837,4.83e-62,161;CL:0002393,5.36e-25,9;CL:0002397,5.36e-25,9;CL:0000134,1.36e-24,354;CL:0002320,8.49e-24,361;CL:0000236,1.80e-22,14;CL:0000219,5.39e-21,386;CL:0000048,1.44e-17,427;CL:0000723,4.28e-17,433;CL:0000034,1.75e-16,441;CL:0000451,5.47e-15,10;CL:0000945,2.79e-14,24;CL:0000826,2.79e-14,24;CL:0000840,9.62e-12,5;CL:0001029,9.62e-12,5;CL:0000990,1.82e-10,8;CL:0000875,7.38e-10,3;CL:0002396,7.38e-10,3;CL:0000784,1.72e-09,3;CL:0000767,7.71e-09,3;CL:0002619,1.03e-08,3;CL:0000226,7.48e-08,3;CL:0000842,7.48e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.59e-63;42!CL:0000049;2.45e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.46e-55!102;UBERON:0003061!9.46e-55!102;UBERON:0002193!7.23e-51!112;UBERON:0002371!5.77e-48!80;UBERON:0001474!4.25e-43!86;UBERON:0002405!7.55e-37!115;UBERON:0004765!1.08e-34!101;UBERON:0001434!1.08e-34!101;UBERON:0003081!2.90e-18!216;UBERON:0002204!2.01e-14!167;UBERON:0002384!1.30e-11!375;UBERON:0007023!1.41e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.11e-81,76;UBERON:0002390,4.62e-76,98;UBERON:0003061,4.62e-76,98;UBERON:0001474,5.02e-74,82;UBERON:0002405,4.64e-72,93;UBERON:0002193,2.28e-70,108;UBERON:0004765,2.67e-66,90;UBERON:0001434,2.29e-58,100;UBERON:0003081,1.21e-30,203;UBERON:0002204,1.23e-29,167;UBERON:0002384,1.03e-22,371;UBERON:0000926,1.20e-14,315;UBERON:0004120,1.20e-14,315;UBERON:0006603,1.20e-14,315 | |||
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|short_description=p4@FGD2 | |||
}} |
Revision as of 20:48, 13 September 2013
Short description: | p4@FGD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FGD2_5end |
Coexpression cluster: | C780_Dendritic_CD14_CD14CD16_CD19_splenic_xeroderma_spleen |
Association with transcript: | 15bp_to_ENST00000459781_5end |
EntrezGene: | FGD2 |
HGNC: | 3664 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.11e-81 | 76 |
hematopoietic system | 4.62e-76 | 98 |
blood island | 4.62e-76 | 98 |
bone element | 5.02e-74 | 82 |
immune system | 4.64e-72 | 93 |
hemolymphoid system | 2.28e-70 | 108 |
skeletal element | 2.67e-66 | 90 |
skeletal system | 2.29e-58 | 100 |
lateral plate mesoderm | 1.21e-30 | 203 |
musculoskeletal system | 1.23e-29 | 167 |
connective tissue | 1.03e-22 | 371 |
mesoderm | 1.20e-14 | 315 |
mesoderm-derived structure | 1.20e-14 | 315 |
presumptive mesoderm | 1.20e-14 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.