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FFCP PHASE1:Mm9::chr2:134469913..134469924,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=52837|HGNC=|MCL_coexpression_id=0|UniProt=Q8C0L0|association_with_transcript=-32bp_to_ENSMUST00000038228_5end|description=CAGE_peak_5_at_Tmx4_5end|id=chr2:134469913..134469924,-|ontology_enrichment_celltype=CL:0000117!5.78e-12!23;CL:0000337!5.78e-12!23;CL:0000540!2.18e-07!33;CL:0000047!2.18e-07!33;CL:0000031!2.18e-07!33;CL:0000404!2.18e-07!33|ontology_enrichment_celltype_v019_2=CL:0002610,1.33e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.21e-18!63;UBERON:0001049!5.37e-17!52;UBERON:0005068!5.37e-17!52;UBERON:0006241!5.37e-17!52;UBERON:0007135!5.37e-17!52;UBERON:0000955!2.19e-16!50;UBERON:0006238!2.19e-16!50;UBERON:0002346!9.89e-16!71;UBERON:0003075!9.89e-16!71;UBERON:0007284!9.89e-16!71;UBERON:0002616!1.09e-15!49;UBERON:0001017!3.12e-15!73;UBERON:0005743!3.12e-15!73;UBERON:0000073!3.26e-15!75;UBERON:0001016!3.26e-15!75;UBERON:0003056!1.62e-14!49;UBERON:0002020!1.76e-14!34;UBERON:0004121!2.12e-14!102;UBERON:0000924!2.12e-14!102;UBERON:0006601!2.12e-14!102;UBERON:0003080!4.25e-13!40;UBERON:0002780!2.17e-12!39;UBERON:0001890!2.17e-12!39;UBERON:0006240!2.17e-12!39;UBERON:0002791!8.39e-12!29;UBERON:0003528!8.39e-12!29;UBERON:0001893!8.39e-12!29;UBERON:0007811!2.69e-10!86;UBERON:0000153!5.25e-10!94;UBERON:0000956!8.60e-09!21;UBERON:0001869!8.60e-09!21;UBERON:0000203!8.60e-09!21;UBERON:0002619!3.67e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.23e-18,10;UBERON:0000411,1.23e-18,10;UBERON:0001950,1.23e-18,10;UBERON:0000073,1.44e-17,54;UBERON:0003528,2.88e-17,29;UBERON:0002791,2.88e-17,29;UBERON:0001893,2.88e-17,29;UBERON:0003080,1.69e-16,40;UBERON:0000955,7.99e-16,47;UBERON:0006238,7.99e-16,47;UBERON:0002780,1.84e-14,39;UBERON:0001890,1.84e-14,39;UBERON:0006240,1.84e-14,39;UBERON:0002020,2.02e-14,34;UBERON:0002616,5.08e-14,46;UBERON:0001017,6.83e-14,73;UBERON:0000956,7.74e-14,21;UBERON:0001869,7.74e-14,21;UBERON:0000203,7.74e-14,21;UBERON:0002619,1.12e-13,17;UBERON:0001016,1.95e-13,75;UBERON:0003056,5.22e-13,49;UBERON:0001049,4.10e-12,52;UBERON:0005068,4.10e-12,52;UBERON:0006241,4.10e-12,52;UBERON:0007135,4.10e-12,52;UBERON:0004684,1.33e-11,3;UBERON:0002275,1.33e-11,3;UBERON:0004121,6.20e-10,95;UBERON:0000924,6.20e-10,95;UBERON:0006601,6.20e-10,95;UBERON:0002346,2.27e-09,64;UBERON:0003075,2.27e-09,64;UBERON:0007284,2.27e-09,64;UBERON:0010371,6.64e-08,73|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,0.270011876663381,0.210324961351382,0.856952953211411,0.220868540951614,0.857435594504678,0.383381884072945,0,1.10115880999389,1.40456071893706,1.0752457327937,1.31886287730194,1.28082701043374,0.52091337055676,0.279182999001381,0.56276261003168,1.68078072554491,0.883885756421003,0.996601765593721,0.745597783301202,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.346970653532272,0,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0.11981512450592,0,0.127070227073065,1.79748767285787,0,0.502617408451458,2.60736480288415,2.55715457330331,1.0389402227978,0.648965052271031,0.305518091550949,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.360124259610698,0.753524089178575,0.204109497453984,0.2562274405697,0.187403449119458,0,0.215567992932842,0.189106080167819,0.527853372491847,0,0,0.348252166522167,0,0.398068533636986,0.702213187313235,0.257347907114715,0,0,0,0,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0.493679549740441,0.164167464079095,0.0810688095458557,0.292399974850665,0,0,0.841159794256509,1.13195073617213,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0.390267295715598,0,0.44292937929755,0.159454768657487,0,0.345369963731791,0,0,0,0,0,0.642202359951168,0.820481806145422,0,0.252470927204373,0,0,0,0,0,0,0.404810701674894,0,0,1.28528526568723,0,0.178065603667255,0.977321756121456,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0.354680467284547,0.356737635204141,0,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0,0,0,0,0.927126510052548,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0.418176592028937,0,0,0.165306911450672,0,0,0,9.01908701894705,0,0.165458490457098,0,0,0.337912250981556,0.234714477291508,0,0.629156066554265,4.1069300540421,13.5374102941197,0,0.202725215290164,0,0,0,0,0.240390899039938,0,0,0,0,0,0,0.233753804363138,0.226730383615211,0,0,0.167884616364078,0,0,0,0,0,0.564751842617067,0.460325236507177,0,1.3748254587495,1.37016503954128,3.0215755895588,4.05013500139084,1.35096360967266,1.81256963593682,1.55328093525546,0.103787347584177,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0.618105171716683,0,0,0,0,0.0936415074698824,0.256100609619477,0.229741875822453,0,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0.436039249896986,0.376437521661322,0.0846146078916765,0,0.789209134313529,0,0,0.118635018124174,0,0.818462086339379,0.77468420592983,0.192906610981141,0.499621155875892,0.233931608445408,0,0.191288332068843,0,0|short_description=p5@Tmx4}}
|EntrezGene=52837
|HGNC=
|MCL_coexpression_id=0
|UniProt=Q8C0L0
|association_with_transcript=-32bp_to_ENSMUST00000038228_5end
|description=CAGE_peak_5_at_Tmx4_5end
|id=chr2:134469913..134469924,-
|ontology_enrichment_celltype=CL:0000117!5.78e-12!23;CL:0000337!5.78e-12!23;CL:0000540!2.18e-07!33;CL:0000047!2.18e-07!33;CL:0000031!2.18e-07!33;CL:0000404!2.18e-07!33
|ontology_enrichment_celltype_v019_2=CL:0002610,1.33e-11,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.21e-18!63;UBERON:0001049!5.37e-17!52;UBERON:0005068!5.37e-17!52;UBERON:0006241!5.37e-17!52;UBERON:0007135!5.37e-17!52;UBERON:0000955!2.19e-16!50;UBERON:0006238!2.19e-16!50;UBERON:0002346!9.89e-16!71;UBERON:0003075!9.89e-16!71;UBERON:0007284!9.89e-16!71;UBERON:0002616!1.09e-15!49;UBERON:0001017!3.12e-15!73;UBERON:0005743!3.12e-15!73;UBERON:0000073!3.26e-15!75;UBERON:0001016!3.26e-15!75;UBERON:0003056!1.62e-14!49;UBERON:0002020!1.76e-14!34;UBERON:0004121!2.12e-14!102;UBERON:0000924!2.12e-14!102;UBERON:0006601!2.12e-14!102;UBERON:0003080!4.25e-13!40;UBERON:0002780!2.17e-12!39;UBERON:0001890!2.17e-12!39;UBERON:0006240!2.17e-12!39;UBERON:0002791!8.39e-12!29;UBERON:0003528!8.39e-12!29;UBERON:0001893!8.39e-12!29;UBERON:0007811!2.69e-10!86;UBERON:0000153!5.25e-10!94;UBERON:0000956!8.60e-09!21;UBERON:0001869!8.60e-09!21;UBERON:0000203!8.60e-09!21;UBERON:0002619!3.67e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.23e-18,10;UBERON:0000411,1.23e-18,10;UBERON:0001950,1.23e-18,10;UBERON:0000073,1.44e-17,54;UBERON:0003528,2.88e-17,29;UBERON:0002791,2.88e-17,29;UBERON:0001893,2.88e-17,29;UBERON:0003080,1.69e-16,40;UBERON:0000955,7.99e-16,47;UBERON:0006238,7.99e-16,47;UBERON:0002780,1.84e-14,39;UBERON:0001890,1.84e-14,39;UBERON:0006240,1.84e-14,39;UBERON:0002020,2.02e-14,34;UBERON:0002616,5.08e-14,46;UBERON:0001017,6.83e-14,73;UBERON:0000956,7.74e-14,21;UBERON:0001869,7.74e-14,21;UBERON:0000203,7.74e-14,21;UBERON:0002619,1.12e-13,17;UBERON:0001016,1.95e-13,75;UBERON:0003056,5.22e-13,49;UBERON:0001049,4.10e-12,52;UBERON:0005068,4.10e-12,52;UBERON:0006241,4.10e-12,52;UBERON:0007135,4.10e-12,52;UBERON:0004684,1.33e-11,3;UBERON:0002275,1.33e-11,3;UBERON:0004121,6.20e-10,95;UBERON:0000924,6.20e-10,95;UBERON:0006601,6.20e-10,95;UBERON:0002346,2.27e-09,64;UBERON:0003075,2.27e-09,64;UBERON:0007284,2.27e-09,64;UBERON:0010371,6.64e-08,73
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,0.270011876663381,0.210324961351382,0.856952953211411,0.220868540951614,0.857435594504678,0.383381884072945,0,1.10115880999389,1.40456071893706,1.0752457327937,1.31886287730194,1.28082701043374,0.52091337055676,0.279182999001381,0.56276261003168,1.68078072554491,0.883885756421003,0.996601765593721,0.745597783301202,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.346970653532272,0,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0.11981512450592,0,0.127070227073065,1.79748767285787,0,0.502617408451458,2.60736480288415,2.55715457330331,1.0389402227978,0.648965052271031,0.305518091550949,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.360124259610698,0.753524089178575,0.204109497453984,0.2562274405697,0.187403449119458,0,0.215567992932842,0.189106080167819,0.527853372491847,0,0,0.348252166522167,0,0.398068533636986,0.702213187313235,0.257347907114715,0,0,0,0,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0.493679549740441,0.164167464079095,0.0810688095458557,0.292399974850665,0,0,0.841159794256509,1.13195073617213,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0.390267295715598,0,0.44292937929755,0.159454768657487,0,0.345369963731791,0,0,0,0,0,0.642202359951168,0.820481806145422,0,0.252470927204373,0,0,0,0,0,0,0.404810701674894,0,0,1.28528526568723,0,0.178065603667255,0.977321756121456,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0.354680467284547,0.356737635204141,0,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0,0,0,0,0.927126510052548,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0.418176592028937,0,0,0.165306911450672,0,0,0,9.01908701894705,0,0.165458490457098,0,0,0.337912250981556,0.234714477291508,0,0.629156066554265,4.1069300540421,13.5374102941197,0,0.202725215290164,0,0,0,0,0.240390899039938,0,0,0,0,0,0,0.233753804363138,0.226730383615211,0,0,0.167884616364078,0,0,0,0,0,0.564751842617067,0.460325236507177,0,1.3748254587495,1.37016503954128,3.0215755895588,4.05013500139084,1.35096360967266,1.81256963593682,1.55328093525546,0.103787347584177,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0.618105171716683,0,0,0,0,0.0936415074698824,0.256100609619477,0.229741875822453,0,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0.436039249896986,0.376437521661322,0.0846146078916765,0,0.789209134313529,0,0,0.118635018124174,0,0.818462086339379,0.77468420592983,0.192906610981141,0.499621155875892,0.233931608445408,0,0.191288332068843,0,0
|short_description=p5@Tmx4
}}

Revision as of 22:10, 13 September 2013

Short description:p5@Tmx4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Tmx4_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -32bp_to_ENSMUST00000038228_5end
EntrezGene:Tmx4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p5@Tmx4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E213.54
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron1.33e-113

Uber anatomy
Ontology termp-valuen
occipital lobe1.23e-1810
visual cortex1.23e-1810
neocortex1.23e-1810
regional part of nervous system1.44e-1754
brain grey matter2.88e-1729
regional part of telencephalon2.88e-1729
telencephalon2.88e-1729
anterior neural tube1.69e-1640
brain7.99e-1647
future brain7.99e-1647
regional part of forebrain1.84e-1439
forebrain1.84e-1439
future forebrain1.84e-1439
gray matter2.02e-1434
regional part of brain5.08e-1446
central nervous system6.83e-1473
cerebral cortex7.74e-1421
cerebral hemisphere7.74e-1421
pallium7.74e-1421
regional part of cerebral cortex1.12e-1317
nervous system1.95e-1375
pre-chordal neural plate5.22e-1349
neural tube4.10e-1252
neural rod4.10e-1252
future spinal cord4.10e-1252
neural keel4.10e-1252
raphe nuclei1.33e-113
reticular formation1.33e-113
ectoderm-derived structure6.20e-1095
ectoderm6.20e-1095
presumptive ectoderm6.20e-1095
neurectoderm2.27e-0964
neural plate2.27e-0964
presumptive neural plate2.27e-0964
ecto-epithelium6.64e-0873







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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