FFCP PHASE1:Hg19::chr1:42800614..42800649,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29178 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UPW0 | |||
|association_with_transcript=0bp_to_ENST00000372572,NM_001198851,uc001che.2_5end | |||
|description=CAGE_peak_5_at_FOXJ3_5end | |||
|id=chr1:42800614..42800649,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!3.81e-07!22;DOID:2994!3.81e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.54e-16!82;UBERON:0000955!1.32e-15!69;UBERON:0006238!1.32e-15!69;UBERON:0000073!2.34e-15!94;UBERON:0001016!2.34e-15!94;UBERON:0005743!7.27e-15!86;UBERON:0001049!2.76e-14!57;UBERON:0005068!2.76e-14!57;UBERON:0006241!2.76e-14!57;UBERON:0007135!2.76e-14!57;UBERON:0002616!6.08e-14!59;UBERON:0002020!2.20e-10!34;UBERON:0003528!2.20e-10!34;UBERON:0001893!4.47e-10!34;UBERON:0003080!6.00e-10!42;UBERON:0002346!8.69e-10!90;UBERON:0002791!1.03e-09!33;UBERON:0002780!1.55e-09!41;UBERON:0001890!1.55e-09!41;UBERON:0006240!1.55e-09!41;UBERON:0001869!3.14e-09!32;UBERON:0007023!9.22e-09!115;UBERON:0003075!9.80e-09!86;UBERON:0007284!9.80e-09!86;UBERON:0000924!1.54e-08!173;UBERON:0006601!1.54e-08!173;UBERON:0000033!2.90e-08!123;UBERON:0000153!9.15e-08!129;UBERON:0007811!9.15e-08!129;UBERON:0004121!1.06e-07!169;UBERON:0002619!1.24e-07!22;UBERON:0000956!1.93e-07!25;UBERON:0000203!1.93e-07!25;UBERON:0001950!8.38e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.67e-09;22!UBERON:0000073;1.70e-09;53!UBERON:0002616;1.70e-09;53!UBERON:0002780;3.10e-09;41!UBERON:0001890;3.10e-09;41!UBERON:0001893;3.17e-09;34!UBERON:0003528;9.99e-09;34!UBERON:0002020;9.99e-09;34!UBERON:0002791;1.56e-08;32!UBERON:0001869;2.28e-08;32!UBERON:0001950;4.68e-08;20!UBERON:0000956;6.54e-08;25!UBERON:0000203;6.54e-08;25!UBERON:0000955;8.07e-08;68!UBERON:0001017;2.75e-07;75!UBERON:0001016;8.71e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.51e-17,89;UBERON:0001017,1.17e-16,81;UBERON:0000955,2.56e-16,68;UBERON:0006238,2.56e-16,68;UBERON:0001049,8.14e-16,56;UBERON:0005068,8.14e-16,56;UBERON:0006241,8.14e-16,56;UBERON:0007135,8.14e-16,56;UBERON:0000073,1.03e-14,53;UBERON:0002616,1.03e-14,53;UBERON:0003528,9.95e-11,34;UBERON:0002020,9.95e-11,34;UBERON:0002780,1.19e-10,41;UBERON:0001890,1.19e-10,41;UBERON:0003080,1.19e-10,41;UBERON:0006240,1.19e-10,41;UBERON:0002346,2.33e-10,86;UBERON:0001893,2.78e-10,34;UBERON:0002619,1.52e-09,22;UBERON:0002791,3.78e-09,32;UBERON:0003075,4.67e-09,82;UBERON:0007284,4.67e-09,82;UBERON:0007023,6.76e-09,114;UBERON:0001869,6.83e-09,32;UBERON:0001950,4.69e-08,20;UBERON:0004121,5.71e-08,171;UBERON:0000924,5.71e-08,171;UBERON:0006601,5.71e-08,171;UBERON:0000956,6.00e-08,25;UBERON:0000203,6.00e-08,25;UBERON:0011216,1.28e-07,223 | |||
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| |||
|short_description=p5@FOXJ3 | |||
}} |
Revision as of 18:08, 10 January 2014
Short description: | p5@FOXJ3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FOXJ3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372572, NM_001198851, uc001che.2_5end |
EntrezGene: | FOXJ3 |
HGNC: | 29178 |
UniProt: | Q9UPW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 9.51e-17 | 89 |
central nervous system | 1.17e-16 | 81 |
brain | 2.56e-16 | 68 |
future brain | 2.56e-16 | 68 |
neural tube | 8.14e-16 | 56 |
neural rod | 8.14e-16 | 56 |
future spinal cord | 8.14e-16 | 56 |
neural keel | 8.14e-16 | 56 |
regional part of nervous system | 1.03e-14 | 53 |
regional part of brain | 1.03e-14 | 53 |
brain grey matter | 9.95e-11 | 34 |
gray matter | 9.95e-11 | 34 |
regional part of forebrain | 1.19e-10 | 41 |
forebrain | 1.19e-10 | 41 |
anterior neural tube | 1.19e-10 | 41 |
future forebrain | 1.19e-10 | 41 |
neurectoderm | 2.33e-10 | 86 |
telencephalon | 2.78e-10 | 34 |
regional part of cerebral cortex | 1.52e-09 | 22 |
regional part of telencephalon | 3.78e-09 | 32 |
neural plate | 4.67e-09 | 82 |
presumptive neural plate | 4.67e-09 | 82 |
adult organism | 6.76e-09 | 114 |
cerebral hemisphere | 6.83e-09 | 32 |
neocortex | 4.69e-08 | 20 |
ectoderm-derived structure | 5.71e-08 | 171 |
ectoderm | 5.71e-08 | 171 |
presumptive ectoderm | 5.71e-08 | 171 |
cerebral cortex | 6.00e-08 | 25 |
pallium | 6.00e-08 | 25 |
organ system subdivision | 1.28e-07 | 223 |