FFCP PHASE1:Hg19::chr1:167905372..167905384,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25874 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24515 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001ges.2_5end | |||
|description=CAGE_peak_5_at_BRP44_5end | |||
|id=chr1:167905372..167905384,- | |||
|ontology_enrichment_celltype=CL:0000557!1.71e-17!71;CL:0000763!8.60e-17!112;CL:0000049!8.60e-17!112;CL:0000839!9.75e-17!70;CL:0002009!1.07e-16!65;CL:0000766!1.24e-16!76;CL:0002194!7.97e-16!63;CL:0000576!7.97e-16!63;CL:0000040!7.97e-16!63;CL:0000559!7.97e-16!63;CL:0000988!1.29e-13!182;CL:0002057!1.38e-13!42;CL:0000037!1.49e-13!172;CL:0000566!1.49e-13!172;CL:0000738!1.05e-12!140;CL:0002032!6.19e-12!165;CL:0000837!6.19e-12!165;CL:0000860!9.95e-12!45;CL:0002031!4.46e-11!124;CL:0002087!5.29e-10!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.31e-13;39!CL:0000234;1.31e-13;39!CL:0000576;5.86e-12;48!CL:0000766;2.89e-11;69!CL:0000860;3.86e-11;33!CL:0002057;3.86e-11;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.35e-24,48;CL:0000234,4.35e-24,48;CL:0002009,7.80e-24,61;CL:0000766,9.19e-24,72;CL:0002194,3.79e-23,59;CL:0000576,3.79e-23,59;CL:0000040,3.79e-23,59;CL:0000559,3.79e-23,59;CL:0000557,5.36e-22,67;CL:0000839,7.97e-21,66;CL:0000860,1.37e-19,42;CL:0002057,1.37e-19,42;CL:0000763,4.09e-19,108;CL:0000049,4.09e-19,108;CL:0000738,2.13e-16,136;CL:0000037,3.79e-15,168;CL:0002087,8.16e-15,115;CL:0000988,2.11e-14,177;CL:0002032,4.29e-14,161;CL:0000837,4.29e-14,161;CL:0002031,1.03e-13,120;CL:0002393,6.16e-09,9;CL:0002397,6.16e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.49e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.95e-16!102;UBERON:0003061!1.95e-16!102;UBERON:0002193!3.69e-16!112;UBERON:0007023!1.18e-15!115;UBERON:0001474!1.54e-13!86;UBERON:0002371!2.04e-13!80;UBERON:0001049!3.50e-13!57;UBERON:0005068!3.50e-13!57;UBERON:0006241!3.50e-13!57;UBERON:0007135!3.50e-13!57;UBERON:0001017!4.48e-13!82;UBERON:0005743!2.15e-12!86;UBERON:0000073!2.17e-12!94;UBERON:0001016!2.17e-12!94;UBERON:0000955!8.24e-11!69;UBERON:0006238!8.24e-11!69;UBERON:0002616!4.63e-10!59;UBERON:0004765!9.14e-10!101;UBERON:0001434!9.14e-10!101;UBERON:0003080!9.71e-10!42;UBERON:0002780!1.80e-09!41;UBERON:0001890!1.80e-09!41;UBERON:0006240!1.80e-09!41;UBERON:0001893!1.92e-09!34;UBERON:0002346!2.62e-09!90;UBERON:0002020!3.29e-09!34;UBERON:0003528!3.29e-09!34;UBERON:0002791!5.62e-09!33;UBERON:0003075!9.00e-09!86;UBERON:0007284!9.00e-09!86;UBERON:0002405!1.18e-08!115;UBERON:0001869!2.54e-08!32;UBERON:0002619!1.08e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.25e-10;34!UBERON:0003528;3.51e-10;34!UBERON:0002020;3.51e-10;34!UBERON:0002619;5.80e-10;22!UBERON:0001869;1.56e-09;32!UBERON:0002791;1.64e-09;32!UBERON:0000073;2.53e-09;53!UBERON:0002616;2.53e-09;53!UBERON:0002780;3.19e-09;41!UBERON:0001890;3.19e-09;41!UBERON:0000956;2.08e-08;25!UBERON:0000203;2.08e-08;25!UBERON:0001950;7.86e-08;20!UBERON:0001016;3.98e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.07e-18,56;UBERON:0005068,1.07e-18,56;UBERON:0006241,1.07e-18,56;UBERON:0007135,1.07e-18,56;UBERON:0002371,4.17e-18,76;UBERON:0001474,5.14e-17,82;UBERON:0002390,6.55e-17,98;UBERON:0003061,6.55e-17,98;UBERON:0001017,2.40e-15,81;UBERON:0000073,2.68e-15,53;UBERON:0002616,2.68e-15,53;UBERON:0001016,6.15e-15,89;UBERON:0004765,1.50e-14,90;UBERON:0002193,3.01e-14,108;UBERON:0000955,1.85e-13,68;UBERON:0006238,1.85e-13,68;UBERON:0001434,5.59e-13,100;UBERON:0003075,6.76e-13,82;UBERON:0007284,6.76e-13,82;UBERON:0002405,6.81e-13,93;UBERON:0001893,7.32e-13,34;UBERON:0002346,1.04e-12,86;UBERON:0002780,1.27e-12,41;UBERON:0001890,1.27e-12,41;UBERON:0003080,1.27e-12,41;UBERON:0006240,1.27e-12,41;UBERON:0003528,1.97e-12,34;UBERON:0002020,1.97e-12,34;UBERON:0002791,8.99e-11,32;UBERON:0001869,1.21e-10,32;UBERON:0002619,1.04e-09,22;UBERON:0007023,2.30e-09,114;UBERON:0010371,2.72e-08,104;UBERON:0000956,3.43e-08,25;UBERON:0000203,3.43e-08,25;UBERON:0001950,9.79e-08,20;UBERON:0003056,1.27e-07,61;UBERON:0003076,1.64e-07,15;UBERON:0003057,1.64e-07,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0.446961094427288,1.74467704820074,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0,0.376627918784408,0.0764134057479513,0.0821005894499457,0.0787107813136792,1.18009283054671,1.15148819429164,2.94150634300544,0,0,0,0.154934401160603,0,0.587200878669695,0,1.80490002723128,1.51907609501096,0.671746422719773,0.32389366601898,1.28787783817093,2.32637182047304,0.377875943688809,0.970336244751265,1.39457422143411,0,0.929119112685311,2.58923153089935,2.30544635876191,1.18241114944293,1.72372840368309,1.29096936716765,2.70852973188684,1.31769637679823,0.272906150057846,1.34834090667051,0.612167784741805,0.962787081228281,0.639337125799041,0.989553900560148,1.79517291859469,0.426224750532694,1.7412554317715,0,0,1.00499466102697,0,1.3031330682307,0.605399502633369,1.10483290796269,1.26584954976354,1.26753171787165,1.91343869968539,1.88692780957538,1.46027220490444,1.95229960693958,1.44653028027372,0.855038231223746,2.98375015798635,2.55729815270488,0,0,0.889509253863555,0,0,0,0,0,1.70763890732835,0.587237189370939,0,2.64342657158052,1.68152568894461,1.05353633910031,1.180258620683,1.57204305099666,1.23360899399706,0.167186495390678,0,1.4203434172042,1.94826728407911,0.111410456885174,0.883817722424512,0.664601683750863,0.270803863765016,0.128091319725675,0.130059347559878,1.15106533222573,0.829050053357545,0.289803085735052,1.4828656316206,0.802622484269139,1.04535523804977,0.113309342697566,0,1.03088233644789,0,0,1.30216690771284,0,0.301150238155546,0.511946444617674,0,0.473554504088034,0,0.80642697289893,0,0.144824403882799,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.0945348171640679,0.443458794925128,0.614843499851882,0.72038491523742,0,0,1.29818957461873,1.39303789839414,0.664789802594326,0.715471872916026,1.14398982156026,0.371457501329565,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.550236083880135,0,0.516833518338658,0.71153252537342,0.33472061276467,0,0,0,0.735326160691737,0.81014194788176,0.267899184852239,0,0.450445921933289,0,0.949265659568129,1.09921046358244,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.490385709340376,0,0.576175924479999,1.17160715916898,0,0,0.149448680551801,0,0.647491777472526,0.280901613404497,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0.877955241761676,0.30648779579902,0.150238058906597,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0.600182192168805,0.309157587715317,0.772921620136887,0.37223371266318,0.168776332241266,0.584622030967192,0.504867548488229,0.368199594569197,0.161646056818812,0,0.201504196455281,0,0,0,0,0,0.132529768321485,0.232387885739037,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0.462985512576611,0.380508304469197,0,0,1.72351904261178,1.17002132569619,1.18904929830983,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.792435906119034,1.03664057770386,0.720599767084807,0.88369703398466,0.190493682876507,0.381988425558278,0,0,0.411309970813294,0.300343057843917,0.285826432630578,0.336393253036082,0.87192013766656,0.07333828582095,0.387815147273333,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,1.00451418286425,2.10833939483032,0.239624855491583,0,0,0.289562613335158,0,0,0.112085143993527,0.591092280605782,1.07813787429759,0.513372145118994,1.52456774533478,1.30139853857622,0.773288812777695,0.502548796003046,0,0,0,1.65766205374414,0.36807447515742,0,0,0.207970861530807,0,0.315404830067869,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0.195801157462741,1.71571711905428,1.44737618286021,1.2942852049117,0.533637789017222,0,0,0,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0.532685175939381,0.246381468041427,0,0.116210378459959,0,0,0,0.34444334449382,0,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,1.19065593693561,0.431831832204279,1.54227252690289,0,0,0,0,0,0.438519753291869,0,0,0,0.325378394664303,0.103041011647722,0.732555718546747,0.41254749960294,0,0,0,0.48335359146061,0.308097234229289,0,0.413509717453592,0.322260734604821,0,0.170453254832202,0.178064071293475,0,0,0,0,0.929691098594572,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0.235624804691373,0,0,0,0,0,0,0.545999645631943,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0.281695602532241,0,0.196498082026242,0,0.354761064070598,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,2.29391162142713,0.569647187174163,0.714695326373367,0,0.648473311192717,0.540031437238115,2.37937552888281,0,0,0.245040215981032,0,0.28853842595289,0.0711418433484141,0,0,1.1490322207942,0.211673582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| |||
|short_description=p5@BRP44 | |||
}} |
Revision as of 22:07, 10 January 2014
Short description: | p5@BRP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BRP44_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001ges.2_5end |
EntrezGene: | BRP44 |
HGNC: | 24515 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.35e-24 | 48 |
phagocyte | 4.35e-24 | 48 |
macrophage dendritic cell progenitor | 7.80e-24 | 61 |
myeloid leukocyte | 9.19e-24 | 72 |
monopoietic cell | 3.79e-23 | 59 |
monocyte | 3.79e-23 | 59 |
monoblast | 3.79e-23 | 59 |
promonocyte | 3.79e-23 | 59 |
granulocyte monocyte progenitor cell | 5.36e-22 | 67 |
myeloid lineage restricted progenitor cell | 7.97e-21 | 66 |
classical monocyte | 1.37e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.37e-19 | 42 |
myeloid cell | 4.09e-19 | 108 |
common myeloid progenitor | 4.09e-19 | 108 |
leukocyte | 2.13e-16 | 136 |
hematopoietic stem cell | 3.79e-15 | 168 |
nongranular leukocyte | 8.16e-15 | 115 |
hematopoietic cell | 2.11e-14 | 177 |
hematopoietic oligopotent progenitor cell | 4.29e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.29e-14 | 161 |
hematopoietic lineage restricted progenitor cell | 1.03e-13 | 120 |
intermediate monocyte | 6.16e-09 | 9 |
CD14-positive, CD16-positive monocyte | 6.16e-09 | 9 |