FFCP PHASE1:Hg19::chr11:102668178..102668206,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_at_chr11:102668178..102668206,+ | |||
|id=chr11:102668178..102668206,+ | |||
|ontology_enrichment_celltype=CL:0000359!9.59e-28!32;CL:0000192!2.67e-24!42;CL:0000514!2.67e-24!42;CL:0000055!5.58e-22!180;CL:0000187!4.86e-21!54;CL:0000183!9.47e-20!59;CL:0000680!2.01e-19!57;CL:0000056!2.01e-19!57;CL:0000355!2.01e-19!57;CL:0000393!5.65e-18!60;CL:0000211!5.65e-18!60;CL:0000222!1.23e-15!119;CL:0002539!9.32e-14!10;CL:0002371!2.49e-12!591;CL:0000220!1.24e-11!246;CL:0002321!2.10e-11!248;CL:0000057!2.79e-11!75;CL:0002139!9.04e-11!24;CL:0000144!5.16e-10!625;CL:0000548!1.76e-09!679;CL:0000004!1.76e-09!679;CL:0000255!1.76e-09!679;CL:0000071!1.89e-09!18;CL:0002546!1.89e-09!18;CL:0000012!2.67e-09!682;CL:0000048!5.62e-09!430;CL:0000723!1.49e-08!436;CL:0002620!4.82e-08!23;CL:0000034!5.19e-08!444;CL:1000306!5.78e-08!4;CL:0002547!5.78e-08!4;CL:0002594!6.30e-08!4;CL:0002494!1.20e-07!16;CL:0000003!4.88e-07!722;CL:0002592!8.30e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.32e-45;32!CL:0000192;3.23e-24;43!CL:0002539;7.59e-21;10!CL:0002594;6.30e-14;4!CL:1000306;1.18e-13;4!CL:0002547;1.18e-13;4!CL:0002595;1.02e-11;5!CL:0002592;1.08e-11;3!CL:0000187;1.93e-11;55!CL:0002494;9.45e-10;16!CL:0000393;1.12e-09;61!CL:0000211;1.12e-09;61!CL:0002139;1.35e-09;24!CL:0002544;3.48e-09;6!CL:0000569;2.09e-08;4!CL:0002593;2.69e-08;2!CL:0000071;3.12e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.46e-47,32;CL:0000192,1.48e-33,43;CL:0000514,1.48e-33,43;CL:0000187,6.34e-25,55;CL:0000680,2.50e-23,58;CL:0000056,2.50e-23,58;CL:0000355,2.50e-23,58;CL:0000393,6.87e-22,61;CL:0000211,6.87e-22,61;CL:0002539,6.86e-21,10;CL:0000222,3.13e-19,121;CL:1000306,6.76e-14,4;CL:0002547,6.76e-14,4;CL:0002594,7.98e-14,4;CL:0002595,9.97e-12,5;CL:0002592,1.12e-11,3;CL:0002321,7.55e-11,250;CL:0002494,9.35e-10,16;CL:0002139,1.32e-09,24;CL:0002544,3.17e-09,6;CL:0002593,2.55e-08,2;CL:0000569,2.55e-08,4;CL:0000011,2.55e-08,4;CL:0000071,2.88e-08,18;CL:0002546,2.88e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000514;3.23e-24;43!CL:0000355;3.80e-11;58!CL:0000011;2.09e-08;4!CL:0002546;3.12e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.02e-44!42;UBERON:0003509!1.02e-44!42;UBERON:0004572!1.02e-44!42;UBERON:0001981!8.62e-40!60;UBERON:0007500!8.62e-40!60;UBERON:0004537!8.62e-40!60;UBERON:0006965!8.62e-40!60;UBERON:0000055!1.45e-38!69;UBERON:0004573!7.68e-35!33;UBERON:0004571!7.68e-35!33;UBERON:0004872!2.76e-34!84;UBERON:0002049!8.65e-32!79;UBERON:0007798!8.65e-32!79;UBERON:0004535!2.03e-26!110;UBERON:0001009!2.72e-25!113;UBERON:0003914!2.58e-23!118;UBERON:0000947!1.03e-21!21;UBERON:0010191!1.03e-21!21;UBERON:0004290!1.64e-20!70;UBERON:0000914!3.28e-19!83;UBERON:0002329!3.28e-19!83;UBERON:0003077!3.28e-19!83;UBERON:0003059!3.28e-19!83;UBERON:0007282!3.28e-19!83;UBERON:0009618!3.28e-19!83;UBERON:0007285!3.28e-19!83;UBERON:0000486!2.74e-18!82;UBERON:0001134!1.59e-17!61;UBERON:0002036!1.59e-17!61;UBERON:0003082!1.59e-17!61;UBERON:0000490!2.50e-17!138;UBERON:0002385!1.14e-16!63;UBERON:0001015!1.14e-16!63;UBERON:0000383!1.14e-16!63;UBERON:0004237!9.32e-14!10;UBERON:0004695!9.32e-14!10;UBERON:0002111!9.32e-14!10;UBERON:0004178!9.32e-14!10;UBERON:0004111!1.73e-10!241;UBERON:0001135!3.79e-10!15;UBERON:0005256!1.40e-09!143;UBERON:0001986!1.89e-09!18;UBERON:0004638!1.89e-09!18;UBERON:0004852!1.89e-09!18;UBERON:0003498!2.61e-09!5;UBERON:0005985!2.61e-09!5;UBERON:0000025!5.41e-09!194;UBERON:0000467!5.86e-09!625;UBERON:0000480!6.75e-09!626;UBERON:0000483!1.20e-08!309;UBERON:0000487!1.26e-08!22;UBERON:0000119!2.11e-08!312;UBERON:0000477!2.44e-08!286;UBERON:0003081!3.10e-08!216;UBERON:0000415!5.78e-08!4;UBERON:0007240!5.78e-08!4;UBERON:0005742!5.78e-08!4;UBERON:0005734!5.78e-08!4;UBERON:0004664!5.78e-08!4;UBERON:0004663!5.78e-08!4;UBERON:0001310!6.30e-08!4;UBERON:0000468!1.94e-07!659;UBERON:0000926!2.93e-07!448;UBERON:0004120!2.93e-07!448;UBERON:0006603!2.93e-07!448;UBERON:0006914!3.12e-07!25;UBERON:0003102!6.16e-07!95;UBERON:0001621!8.30e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.17e-54;33!UBERON:0004571;7.17e-54;33!UBERON:0001637;3.09e-49;42!UBERON:0003509;3.09e-49;42!UBERON:0004572;3.09e-49;42!UBERON:0000947;1.66e-37;21!UBERON:0010191;1.66e-37;21!UBERON:0007500;4.22e-30;56!UBERON:0001981;4.22e-30;56!UBERON:0004537;4.22e-30;56!UBERON:0000055;6.54e-25;65!UBERON:0004237;7.59e-21;10!UBERON:0004695;7.59e-21;10!UBERON:0002111;7.59e-21;10!UBERON:0004178;7.59e-21;10!UBERON:0003914;2.55e-20;74!UBERON:0002049;2.66e-20;75!UBERON:0007798;2.66e-20;75!UBERON:0001310;6.30e-14;4!UBERON:0004797;1.18e-13;4!UBERON:0000415;1.18e-13;4!UBERON:0007240;1.18e-13;4!UBERON:0005742;1.18e-13;4!UBERON:0005734;1.18e-13;4!UBERON:0004664;1.18e-13;4!UBERON:0004663;1.18e-13;4!UBERON:0001135;2.05e-13;15!UBERON:0001009;8.43e-12;112!UBERON:0003834;1.02e-11;5!UBERON:0001533;1.02e-11;5!UBERON:0003498;1.08e-11;3!UBERON:0005985;1.08e-11;3!UBERON:0001621;1.08e-11;3!UBERON:0004535;1.82e-11;109!UBERON:0000025;5.45e-10;93!UBERON:0003513;2.33e-08;7!UBERON:0002456;2.69e-08;2!UBERON:0004638;3.12e-08;18!UBERON:0001986;3.12e-08;18!UBERON:0004852;3.12e-08;18!UBERON:0000948;8.50e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.26e-66,42;UBERON:0003509,1.26e-66,42;UBERON:0004572,1.26e-66,42;UBERON:0004573,1.24e-59,33;UBERON:0004571,1.24e-59,33;UBERON:0007500,2.00e-55,59;UBERON:0001981,2.00e-55,59;UBERON:0004537,2.00e-55,59;UBERON:0006965,2.00e-55,59;UBERON:0000055,3.99e-53,68;UBERON:0004872,1.35e-47,83;UBERON:0002049,4.04e-45,78;UBERON:0007798,4.04e-45,78;UBERON:0004535,3.51e-38,109;UBERON:0000947,8.86e-38,21;UBERON:0010191,8.86e-38,21;UBERON:0001009,6.87e-37,112;UBERON:0003914,5.92e-31,117;UBERON:0002329,1.50e-23,71;UBERON:0003059,1.50e-23,71;UBERON:0007282,1.50e-23,71;UBERON:0004290,1.50e-23,71;UBERON:0009618,1.50e-23,71;UBERON:0003077,3.95e-23,72;UBERON:0007285,3.95e-23,72;UBERON:0007524,1.01e-22,73;UBERON:0001134,1.93e-21,62;UBERON:0002036,1.93e-21,62;UBERON:0003082,1.93e-21,62;UBERON:0000486,5.77e-21,83;UBERON:0004237,6.86e-21,10;UBERON:0004695,6.86e-21,10;UBERON:0002111,6.86e-21,10;UBERON:0004178,6.86e-21,10;UBERON:0007503,7.69e-21,78;UBERON:0002385,1.38e-20,64;UBERON:0001015,1.38e-20,64;UBERON:0000383,1.38e-20,64;UBERON:0000490,1.41e-16,148;UBERON:0000025,4.69e-15,192;UBERON:0003081,9.11e-15,203;UBERON:0000415,6.76e-14,4;UBERON:0007240,6.76e-14,4;UBERON:0005742,6.76e-14,4;UBERON:0005734,6.76e-14,4;UBERON:0004664,6.76e-14,4;UBERON:0004663,6.76e-14,4;UBERON:0001310,7.98e-14,4;UBERON:0004111,1.01e-13,240;UBERON:0001135,1.92e-13,15;UBERON:0000926,9.53e-12,315;UBERON:0004120,9.53e-12,315;UBERON:0006603,9.53e-12,315;UBERON:0003834,9.97e-12,5;UBERON:0001533,9.97e-12,5;UBERON:0003498,1.11e-11,5;UBERON:0005985,1.11e-11,5;UBERON:0001621,1.12e-11,3;UBERON:0005256,5.03e-11,122;UBERON:0000483,4.96e-10,306;UBERON:0000119,7.74e-10,309;UBERON:0003513,2.29e-08,7;UBERON:0002456,2.55e-08,2;UBERON:0004638,2.88e-08,18;UBERON:0001986,2.88e-08,18;UBERON:0004852,2.88e-08,18;UBERON:0004797,6.02e-08,7;UBERON:0000948,6.36e-08,24;UBERON:0005498,6.36e-08,24;UBERON:0004140,6.36e-08,24;UBERON:0009881,6.36e-08,24;UBERON:0004141,6.36e-08,24;UBERON:0003084,6.36e-08,24;UBERON:0007005,6.36e-08,24;UBERON:0004139,6.36e-08,24;UBERON:0004291,6.36e-08,24;UBERON:0002204,3.36e-07,167;UBERON:0003104,5.19e-07,160;UBERON:0009142,5.19e-07,160;UBERON:0007100,6.86e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,10.0848771967766,2.41077811209591,2.19093027116212,3.90346239032406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59009925893364,2.58070378531837,5.20710752411391,0,0.419499436209906,0.275118041940067,0,0,2.13459757612026,0.33472061276467,3.22263453687318,0,0.488124115096339,0,4.86085168729056,0,0,0,6.13266549863533,0.949265659568129,1.64881569537367,0,0,0,0,7.59783069987479,1.85372853138506,2.58152958673932,2.83734705758686,0.560677600142307,0,1.97334038733728,0,0,0.326923806226917,0,0,0,1.5608003841516,0.570471821544449,0,0.704606991862589,1.13311061057692,1.12360645361799,0.816616685019573,1.84251475967652,0.103325781175765,0,0.247266929278557,0,0,1.17835279767846,0,0,0,0,0,0.226864366320042,0,0,0,1.50045548042201,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.276149695926898,0,0,0,0.169560592310488,2.12586938479627,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58803092537181,0,0,0,0,0,0,0,1.87467667973554,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,1.47702144595741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0.710246901252508,1.14978018419333,0.519254429183621,0.929683027679674,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.413509717453592,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0.31481234683064,3.485186350803,3.08033580176089,2.66153015158511,3.47973196830029,9.266210955196,0,0,0,0,0,0,0.318203247925937,4.70969184119538,0,0,0.235624804691373,5.0545620393329,7.92551605865041,26.1180242868168,0,5.84912375115083,9.50851320810799,0,0.141405431953713,2.26016233240486,0,5.97095077717098,3.06915619677634,0,0,7.50768394762005,2.16876448669825,2.25356482025793,0,0,2.49669736036875,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,5.28767299025073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91153644677601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62899880526114,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,1.36484205787483,0,2.35265819698172,0,0,1.19403842309499,0,0,0.189403005275089,0,0,1.14420034198462,0,6.372925223894,23.2132585483725,1.91156120596443,0.899606224327209,1.55262956876259,0,0,0,0.150257608997218,0,0.813741466409323,6.91024904969726,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7614397042404,0,0,0,0,0,2.45657876265145,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0.93061915699296,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897054900644907,0,0,0,0,0,0,0,0,0,0,1.07790242527904,0,0,0,0,0,0 | |||
|short_description=p@chr11:102668178..102668206,+ | |||
}} |
Revision as of 10:03, 11 January 2014
Short description: | p@chr11:102668178..102668206, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102668178..102668206, + |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.46e-47 | 32 |
smooth muscle cell | 1.48e-33 | 43 |
smooth muscle myoblast | 1.48e-33 | 43 |
muscle cell | 6.34e-25 | 55 |
muscle precursor cell | 2.50e-23 | 58 |
myoblast | 2.50e-23 | 58 |
multi-potent skeletal muscle stem cell | 2.50e-23 | 58 |
electrically responsive cell | 6.87e-22 | 61 |
electrically active cell | 6.87e-22 | 61 |
aortic smooth muscle cell | 6.86e-21 | 10 |
mesodermal cell | 3.13e-19 | 121 |
fibroblast of tunica adventitia of artery | 6.76e-14 | 4 |
fibroblast of the aortic adventitia | 6.76e-14 | 4 |
smooth muscle cell of the umbilical artery | 7.98e-14 | 4 |
smooth muscle cell of the subclavian artery | 9.97e-12 | 5 |
smooth muscle cell of the coronary artery | 1.12e-11 | 3 |
embryonic cell | 7.55e-11 | 250 |
cardiocyte | 9.35e-10 | 16 |
endothelial cell of vascular tree | 1.32e-09 | 24 |
aortic endothelial cell | 3.17e-09 | 6 |
smooth muscle cell of the internal thoracic artery | 2.55e-08 | 2 |
cardiac mesenchymal cell | 2.55e-08 | 4 |
migratory trunk neural crest cell | 2.55e-08 | 4 |
blood vessel endothelial cell | 2.88e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.88e-08 | 18 |