FFCP PHASE1:Hg19::chr2:70313393..70313424,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42948 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000411429,ENST00000416068,ENST00000416395,ENST00000418308,ENST00000418564,ENST00000419963,ENST00000420309,ENST00000421843,ENST00000422515,ENST00000425601,ENST00000429599,ENST00000437456,ENST00000439892,ENST00000442040,ENST00000444320,ENST00000449178,ENST00000456161,ENST00000457770,uc002sgb.1_5end | |||
|coexpression_cluster_id=C1316 | |||
|description=CAGE_peak_1_at_PCBP1-AS1_5end | |||
|id=chr2:70313393..70313424,- | |||
|ontology_enrichment_celltype=CL:0000037!1.49e-14!172;CL:0000566!1.49e-14!172;CL:0000988!2.71e-14!182;CL:0000738!6.46e-14!140;CL:0002032!7.47e-13!165;CL:0000837!7.47e-13!165;CL:0002031!3.10e-10!124;CL:0002087!3.70e-10!119;CL:0000838!2.35e-09!52;CL:0000542!2.53e-09!53;CL:0000051!2.53e-09!53;CL:0000084!3.40e-07!25;CL:0000827!3.40e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.06e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.01e-16,177;CL:0000037,4.94e-16,168;CL:0000738,1.65e-15,136;CL:0002032,3.11e-14,161;CL:0000837,3.11e-14,161;CL:0002031,1.37e-11,120;CL:0002087,1.55e-11,115;CL:0000838,1.68e-09,52;CL:0000542,1.81e-09,53;CL:0000051,1.81e-09,53;CL:0000084,2.67e-07,25;CL:0000827,2.67e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.96e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.11e-37!115;UBERON:0001049!7.99e-28!57;UBERON:0005068!7.99e-28!57;UBERON:0006241!7.99e-28!57;UBERON:0007135!7.99e-28!57;UBERON:0001017!2.51e-23!82;UBERON:0005743!1.59e-22!86;UBERON:0003080!1.92e-22!42;UBERON:0002780!2.08e-22!41;UBERON:0001890!2.08e-22!41;UBERON:0006240!2.08e-22!41;UBERON:0002616!2.23e-22!59;UBERON:0000073!5.28e-20!94;UBERON:0001016!5.28e-20!94;UBERON:0000955!9.86e-20!69;UBERON:0006238!9.86e-20!69;UBERON:0001893!1.90e-18!34;UBERON:0002020!2.27e-18!34;UBERON:0003528!2.27e-18!34;UBERON:0002791!7.14e-18!33;UBERON:0001869!4.15e-17!32;UBERON:0003075!2.52e-16!86;UBERON:0007284!2.52e-16!86;UBERON:0002346!8.59e-16!90;UBERON:0002619!1.79e-13!22;UBERON:0000956!6.23e-13!25;UBERON:0000203!6.23e-13!25;UBERON:0003056!1.03e-12!61;UBERON:0001950!1.89e-12!20;UBERON:0000153!3.46e-07!129;UBERON:0007811!3.46e-07!129;UBERON:0002308!5.29e-07!9;UBERON:0000125!5.29e-07!9;UBERON:0002420!7.45e-07!9;UBERON:0007245!7.45e-07!9;UBERON:0010009!7.45e-07!9;UBERON:0010011!7.45e-07!9;UBERON:0000454!7.45e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.28e-16;41!UBERON:0001890;1.28e-16;41!UBERON:0001893;4.01e-16;34!UBERON:0003528;5.65e-16;34!UBERON:0002020;5.65e-16;34!UBERON:0000073;7.19e-16;53!UBERON:0002616;7.19e-16;53!UBERON:0002791;8.10e-16;32!UBERON:0001869;1.04e-15;32!UBERON:0002619;8.95e-14;22!UBERON:0000956;3.29e-13;25!UBERON:0000203;3.29e-13;25!UBERON:0001950;9.72e-13;20!UBERON:0007023;2.85e-11;114!UBERON:0001017;3.92e-10;75!UBERON:0000955;1.48e-09;68!UBERON:0001016;8.99e-09;83!UBERON:0000125;3.94e-07;9!UBERON:0002308;3.94e-07;9!UBERON:0002420;5.71e-07;9!UBERON:0007245;5.71e-07;9!UBERON:0010009;5.71e-07;9!UBERON:0010011;5.71e-07;9!UBERON:0000454;5.71e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.84e-37,114;UBERON:0001049,2.98e-28,56;UBERON:0005068,2.98e-28,56;UBERON:0006241,2.98e-28,56;UBERON:0007135,2.98e-28,56;UBERON:0000073,2.50e-26,53;UBERON:0002616,2.50e-26,53;UBERON:0001017,5.77e-24,81;UBERON:0002780,8.47e-23,41;UBERON:0001890,8.47e-23,41;UBERON:0003080,8.47e-23,41;UBERON:0006240,8.47e-23,41;UBERON:0001016,2.46e-21,89;UBERON:0000955,2.64e-20,68;UBERON:0006238,2.64e-20,68;UBERON:0001893,9.21e-19,34;UBERON:0003528,1.10e-18,34;UBERON:0002020,1.10e-18,34;UBERON:0003075,1.33e-17,82;UBERON:0007284,1.33e-17,82;UBERON:0002791,1.72e-17,32;UBERON:0001869,2.13e-17,32;UBERON:0002346,5.00e-17,86;UBERON:0002619,1.07e-13,22;UBERON:0000956,3.83e-13,25;UBERON:0000203,3.83e-13,25;UBERON:0003056,6.44e-13,61;UBERON:0001950,1.18e-12,20;UBERON:0010371,1.21e-11,104;UBERON:0002390,3.90e-07,98;UBERON:0003061,3.90e-07,98;UBERON:0000125,4.18e-07,9;UBERON:0002308,4.18e-07,9;UBERON:0002420,5.93e-07,9;UBERON:0007245,5.93e-07,9;UBERON:0010009,5.93e-07,9;UBERON:0010011,5.93e-07,9;UBERON:0000454,5.93e-07,9;UBERON:0002193,8.59e-07,108;UBERON:0003076,9.24e-07,15;UBERON:0003057,9.24e-07,15 | |||
|phase1_expression=2.90685406832891,3.42560838225573,5.49722175974288,2.00146596706261,2.23480547213644,2.61701557230111,2.53299878168311,2.52687949370732,4.17897005119742,1.22866968250754,0,2.18441372130172,0.527533956456907,1.11389717664042,0.331397375727916,0.672325146451775,0.602694528023977,1.46062018077475,0.975865597581014,1.47745269692145,1.02000345622126,3.76145665773705,6.29719171688325,4.10623275218653,2.88748071068046,16.0468152070698,14.6960055115403,16.2144209506179,5.11373559903575,5.75744097145819,4.95411594611443,0,0,0.369754010166788,3.25362242437267,2.27470771979874,8.51441274071057,4.9859586767869,4.8130667392834,5.20826089718044,4.47830948479849,5.50619232232265,1.03030227053675,4.65274364094607,4.53451132426571,6.0646015296954,4.41615170120801,4.93401465626191,5.57471467611186,4.02769349251011,7.17249978281482,8.27687804610048,4.48169384957604,4.51839278508678,8.12558919566051,5.08254316765033,6.00393530127261,5.61808711112712,5.20342617030534,5.1348644332175,10.2293940127847,3.95821560224059,5.58498241340569,4.68847225585964,3.77272010217159,1.70215567407342,9.34233373493363,4.52247597462138,5.21482918420201,6.08128765174327,1.81619850790011,2.20966581592539,8.22802207346299,6.33765858935825,7.22854619881148,5.66078342872615,7.30136102452218,6.30742949934327,8.19700492155109,7.12531859353121,7.35991705636633,5.11459630540975,3.51992488922645,7.09980194640771,3.55803701545422,9.38806489646316,5.60554381850417,6.32227683949932,3.96626923670917,7.63243003628291,2.84606484554724,7.6340834618222,4.96955196562797,3.96513985737078,3.92355994087075,6.05783394982677,9.44206896546399,7.8602152549833,5.75684197198626,1.17030546773475,10.4295125322749,8.04861269749047,13.6378709885538,5.79334375802903,10.6058126690941,6.42448294292501,10.5613506868356,2.17755243533648,3.12142434143708,5.59088875652499,4.42160028457357,4.34704628602579,10.5283459845063,15.7849088572931,22.9978152370949,4.98561107869291,10.3469533272519,7.55980380061786,11.6389058328971,11.7869203299916,7.1619179924206,5.70271226669025,5.72185452495537,6.14335733541208,4.99722906209383,11.1285308460688,8.21127996921047,6.24980903996671,6.15112450302067,6.08262496307756,2.43806866313962,1.34140171940727,1.66221330396589,0.722878304769133,2.00535164254356,1.73815822752988,5.5670016293577,9.73269740605272,2.3633704291017,1.77383517970051,1.84453049955565,17.4202170411958,0.728590576585084,1.11235332835329,1.62273696827342,2.26368658489047,2.39324328933957,18.840759320122,9.15191857248205,10.0293525358983,0.596287222100115,1.72046919021225,1.38856200643038,1.69592382577203,1.67799774483962,0.550236083880135,3.34391946458897,3.10100111003195,2.84613010149368,4.01664735317604,0.805658634218294,0,0.24406205754817,1.10298924103761,0.81014194788176,4.82218532734031,1.57170560838319,3.0405099730497,0,0.949265659568129,1.83201743930407,19.7670626154095,7.75560528296651,0.872188104285069,3.47880366186723,1.2663051166458,1.58891016975863,2.29469296599051,0.709336764396714,1.68203280042692,0,0.74000264525148,0,1.34710672069688,0.980771418680752,2.57307626996383,0.576175924479999,4.68642863667593,1.5608003841516,0,0.597794722207204,1.17434498643765,0.647491777472526,0.421352420106746,0.61246251376468,0.61417158655884,2.47981874821837,5.94001428641027,0.989067717114227,0.910161361938026,2.87447256726495,0.673344455816265,0.250237039743928,0.554128230968366,0.877955241761676,1.5324389789951,1.20190447125277,0.680593098960126,0.717558542755448,1.49490172172997,1.48352330811693,1.20036438433761,1.23663035086127,1.8034837803194,0.930584281657949,1.18143432568886,0.974370051611986,1.00973509697646,2.76149695926898,1.2931684545505,0,0.403008392910561,2.03472710772585,0,0.272746120590835,0,3.41526377162867,5.30119073285941,4.99633954338929,3.42081481550722,3.28017106138317,4.74470566798579,3.12899064659632,0.643240938192885,1.38134921352481,7.89425477654364,3.60939740834793,0.591534000199219,1.18009283054671,0.964044119533928,0.882351781859152,0.435758888184812,0.71181185733329,0.269662616320329,0.392442930250692,1.15424147083917,0.738155454624648,0,2.8810180793198,2.94017422771084,5.07020139287323,0.982827216677626,5.90789906681404,30.9024169590255,10.4540172761647,0.514703430895577,0.109750285408626,0,0.201057944823262,0.185176890317059,1.62904152655162,1.03993478527958,0,1.62302566965108,1.17408694235822,1.73239737313289,2.77791307545966,1.14152491340759,3.1608175918371,0.858486162094873,4.67812311566055,0.936017060556951,0.743155811443641,0,0,0,1.34337784054272,0.290633938513962,0,11.8239177095026,7.48411689112421,5.59785911960085,5.90891809009542,4.29224273649692,1.46045156871989,2.67391897890794,1.17217447210047,0,1.33675740514321,1.50171528921959,2.00078502841405,1.23344192779897,0,0.66004457238855,2.19761916788222,10.7296933755565,2.535908257668,0.531876233169741,0,0,0,2.1313774321288,1.14382394926518,8.68194568626309,1.64648067356154,0.977208552881205,1.42156779497018,0,1.50719688529793,1.74306691720059,0.299918973546171,0,1.50677127429638,0,1.9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| |||
|short_description=p1@PCBP1-AS1 | |||
}} |
Revision as of 03:46, 21 January 2014
Short description: | p1@PCBP1-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCBP1-AS1_5end |
Coexpression cluster: | C1316_cerebellum_thalamus_globus_substantia_occipital_hippocampus_middle |
Association with transcript: | 0bp_to_ENST00000411429, ENST00000416068, ENST00000416395, ENST00000418308, ENST00000418564, ENST00000419963, ENST00000420309, ENST00000421843, ENST00000422515, ENST00000425601, ENST00000429599, ENST00000437456, ENST00000439892, ENST00000442040, ENST00000444320, ENST00000449178, ENST00000456161, ENST00000457770, uc002sgb.1_5end |
EntrezGene: | NA |
HGNC: | 42948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.01e-16 | 177 |
hematopoietic stem cell | 4.94e-16 | 168 |
leukocyte | 1.65e-15 | 136 |
hematopoietic oligopotent progenitor cell | 3.11e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.11e-14 | 161 |
hematopoietic lineage restricted progenitor cell | 1.37e-11 | 120 |
nongranular leukocyte | 1.55e-11 | 115 |
lymphoid lineage restricted progenitor cell | 1.68e-09 | 52 |
lymphocyte | 1.81e-09 | 53 |
common lymphoid progenitor | 1.81e-09 | 53 |
T cell | 2.67e-07 | 25 |
pro-T cell | 2.67e-07 | 25 |