FFCP PHASE1:Hg19::chr3:132378897..132378913,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84129 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30211 | |||
|TSSclassifier=strong | |||
|UniProt=F8WEV0,Q08AE9 | |||
|association_with_transcript=0bp_to_ENST00000485198,ENST00000489991,ENST00000545291_5end | |||
|description=CAGE_peak_3_at_ACAD11_5end | |||
|id=chr3:132378897..132378913,- | |||
|ontology_enrichment_celltype=CL:0000542!5.77e-11!53;CL:0000051!5.77e-11!53;CL:0000838!1.02e-10!52;CL:0000791!3.64e-07!18;CL:0000789!3.64e-07!18;CL:0002420!3.64e-07!18;CL:0002419!3.64e-07!18;CL:0000790!3.64e-07!18;CL:0000945!3.93e-07!24;CL:0000826!3.93e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.13e-07;24!CL:0000791;2.71e-07;18!CL:0000789;2.71e-07;18!CL:0002419;2.71e-07;18!CL:0000542;2.96e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.99e-11,53;CL:0000051,1.99e-11,53;CL:0000838,3.86e-11,52;CL:0000945,2.07e-07,24;CL:0000826,2.07e-07,24;CL:0000791,2.96e-07,18;CL:0000789,2.96e-07,18;CL:0002420,2.96e-07,18;CL:0002419,2.96e-07,18;CL:0000790,2.96e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;2.71e-07;18!CL:0000051;2.96e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.37e-19!115;UBERON:0001049!5.80e-11!57;UBERON:0005068!5.80e-11!57;UBERON:0006241!5.80e-11!57;UBERON:0007135!5.80e-11!57;UBERON:0002780!1.18e-10!41;UBERON:0001890!1.18e-10!41;UBERON:0006240!1.18e-10!41;UBERON:0003080!7.50e-10!42;UBERON:0002616!2.77e-09!59;UBERON:0002020!4.56e-09!34;UBERON:0003528!4.56e-09!34;UBERON:0001893!4.93e-09!34;UBERON:0002791!1.17e-08!33;UBERON:0000955!1.50e-08!69;UBERON:0006238!1.50e-08!69;UBERON:0001869!3.57e-08!32;UBERON:0001017!4.27e-08!82;UBERON:0000073!8.37e-08!94;UBERON:0001016!8.37e-08!94;UBERON:0005743!1.54e-07!86;UBERON:0002619!2.10e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.50e-07;41!UBERON:0001890;1.50e-07;41!UBERON:0003528;5.39e-07;34!UBERON:0002020;5.39e-07;34!UBERON:0000073;5.82e-07;53!UBERON:0002616;5.82e-07;53!UBERON:0002791;9.47e-07;32!UBERON:0001893;9.84e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.15e-21,114;UBERON:0001049,1.25e-12,56;UBERON:0005068,1.25e-12,56;UBERON:0006241,1.25e-12,56;UBERON:0007135,1.25e-12,56;UBERON:0000073,2.66e-12,53;UBERON:0002616,2.66e-12,53;UBERON:0002780,5.66e-11,41;UBERON:0001890,5.66e-11,41;UBERON:0003080,5.66e-11,41;UBERON:0006240,5.66e-11,41;UBERON:0000955,8.80e-10,68;UBERON:0006238,8.80e-10,68;UBERON:0003528,2.33e-09,34;UBERON:0002020,2.33e-09,34;UBERON:0001893,2.55e-09,34;UBERON:0001016,7.80e-09,89;UBERON:0001017,1.44e-08,81;UBERON:0002791,1.70e-08,32;UBERON:0001869,2.50e-08,32;UBERON:0002619,1.37e-07,22;UBERON:0002346,3.08e-07,86;UBERON:0003075,4.20e-07,82;UBERON:0007284,4.20e-07,82 | |||
|phase1_expression=1.09007027562334,1.49870366723688,1.12763523276777,0,2.23480547213644,0.872338524100369,0,0,0.261185628199839,0,0,0.655324116390517,0.263766978228454,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0.369363174230364,0.204000691244253,0,0.286235987131057,0.273748850145768,0.87879847716362,1.14620108621927,0.57470412614962,0.550975469195755,0.393364276848904,1.53531759238885,1.70297735647684,0,0.30120591877825,1.47901604066715,2.16908161624845,4.12290774213522,1.46800219667424,1.10799081706375,1.40381113229099,1.51907609501096,1.56740831967947,0,1.54545340580512,0.290796477559129,0,0.970336244751265,0,0.411167888021826,0.309706370895104,0,0.512321413058201,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0.736555271975129,0,1.69004229049553,1.06302149982522,0.419317291016752,1.68492946719743,0.600707571366025,1.12507910687956,1.99508920618874,3.58050018958362,0.91332076882317,1.75996244461323,1.63841583378639,3.55803701545422,3.41384178053206,2.40237592221607,3.4485146397269,3.30522436392431,0.954053754535364,3.41527781465669,8.22132065119314,4.20500550937752,5.28685314316103,2.24203425192614,3.423993102076,4.52432471261816,5.10913991573914,2.46721798799411,1.67186495390678,3.2592226663359,4.2610302516126,7.79306913631645,2.33961959458865,3.53527088969805,3.1014745241707,2.43723477388514,0.640456598628376,0.910415432919148,1.47994114143309,1.65810010671509,3.47763702882063,3.70716407905151,2.94294910898684,8.36284190439814,1.92625882585863,3.44898444241729,2.74901956386104,2.78321661221453,2.86708872891687,3.25541726928209,0.950452044448374,2.40920190524436,2.43174561193395,1.24930726552346,2.36777252044017,1.64225599384209,4.43534835094411,3.4767225451856,3.33096128930438,0,0.670700859703636,0.255725123687061,1.44575660953827,1.00267582127178,0.579386075843295,1.5905718941022,1.94653948121054,0.472674085820339,0.665188192387692,0.527008714158756,2.5540919722054,1.09288586487763,0,0.97364218096405,0.522389211897802,0.664789802594326,5.96226560763355,8.00792875092179,3.34311751196608,0.198762407366705,0,0.347140501607594,0,0,0.550236083880135,0.417989933073621,0.516833518338658,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.625098097988558,1.34717623575702,0.337834441449967,0,0,0,0,0,0,1.49091585508596,0.886413581652058,4.76673050927588,4.87622255272983,0,0.560677600142307,0,0,0.933633106199299,0.942974704487816,0.980771418680752,0.605429710579726,0.576175924479999,1.64025002283658,0.312160076830321,0.570471821544449,0.747243402759005,1.40921398372518,0.485618833104395,0.842704840213491,0.408308342509787,0.737005903870608,1.34323515528495,0,2.71993622206413,0,0,0.841680569770331,0.125118519871964,0.554128230968366,0.438977620880838,0.30648779579902,0.45071417671979,0.453728732640084,2.69084453533293,2.13557388818567,1.69545520927649,4.50136644126603,2.06105058476878,6.44101350114073,2.23340227597908,2.86919764810153,0.974370051611986,4.29137416214995,2.48534726334208,3.87950536365149,4.61512470271599,0.906768884048762,0.67824236924195,0.386521706326594,1.09098448236334,0.573609190778008,0.243947412259191,0.265059536642971,0.813357600086629,0.829288440122964,0.252320850875628,1.09493207722749,0,0,0,1.39310378409594,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0.392442930250692,0,0,0,0,0,2.53510069643662,2.94848165003288,2.95394953340702,0.882926198829301,1.8448265781467,0,0.439001141634502,2.24803506515239,0.402115889646523,0.740707561268237,0.977424915930974,0,0,0.579652024875384,0.352226082707465,0.288732895522148,0.925971025153221,0.380508304469197,0,0.858486162094873,1.96973604869918,1.17002132569619,0.743155811443641,0,1.17587489739202,0.141775097242386,2.4180801129769,1.45316969256981,0,8.37527504423104,1.05658120815871,2.28060927094849,3.31475892859011,2.39860623510122,0.507983154337352,0.381988425558278,0,0,0.102827492703324,0.600686115687835,1.14330573052231,0.112131084345361,0,0.2933531432838,1.68053230485111,0,0.845302752556,1.59562869950922,0,0,0,0,0.428933980974443,1.08524321078289,0,0,1.06617584622764,0.791951872933429,0.301439377059586,0,0.399891964728228,0,0,0,0.958499421966331,2.29723871668228,0,0.289562613335158,0.410952645100767,0.716243852959582,0.896681151948218,3.15249216323084,1.2937654491571,2.31017465303547,0.508189248444927,2.60279707715243,0,0.670065061337395,0.637938751653163,0,0,0,0.24538298343828,0,0.813795071099207,0.207970861530807,0.892144943985809,1.10391690523754,0.937131319941706,0.300946099727719,0,0,0.664225598535437,0,1.21637060255316,0,0.343143423810856,1.24060815673732,1.2942852049117,0.74709290462411,0.303127571446259,1.66435439510497,0.30239029332968,1.73675465473144,5.52463103837025,0.561320188866147,1.40953064181271,0.511707249066704,1.76939313257968,0,0.462629081407967,0.177561725313127,0.328508624055237,0,0.116210378459959,1.81289174387433,0,1.28913384510255,0.918515585316854,0.546273504020151,0.655622074797121,0.451199612907412,0.539107359730903,0.784349769176855,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0.447749509444357,0.438519753291869,0,0.256450125116389,0,0.650756789328606,2.16386124460217,0.54941678891006,0.577566499444116,0.574265537996172,0.650060246036521,1.6068392984416,1.35339005608971,0.308097234229289,0.921022048356777,0.827019434907183,1.28904293841928,0.870100163485371,0.426133137080504,0.712256285173899,2.97512847649761,0.960950336825531,4.08360679982669,0.6069466851333,1.85938219718914,5.35180989612088,0,0.308033580176089,0,0.869932992075073,0,0.286249773483982,1.116475108079,0.316379424718726,0.38126038784765,0,0.42793898803392,1.59101623962968,1.56989728039846,0.539617372749944,1.37268514868027,0.706874414074119,0,0,0,0,0.243713489631284,0,0.9554993798559,1.55545975149084,0,0,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0.709522128141196,0.633322905892992,1.31717957183961,0,0,0.769776901804097,0.670302275535787,0,2.07116361708914,0,0,0,0.689170200620878,1.52234282769651,2.29391162142713,2.27858874869665,2.62054953003568,1.23408681925858,0,2.16012574895246,1.58625035258854,0.427296284509893,1.92495971052672,0,2.22963810150862,2.30830740762312,1.63626239701352,0.159426272728822,1.1974762285969,1.34053759092657,1.69338866179106,0.649243880549111,1.96558024679421,0,0.626719583092093,2.50634477090067,1.86220955581764,0.963528450622197,0,1.27753871307098,1.37402137902306,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0.540911356951966,0.99921590399346,0,0.18714054040822,2.63714722689409,0,0.66866030566487,0,0.23874448473769,0,1.53580351049616,1.9882952955326,2.67271891179974,3.22795244566427,0.329607748453519,2.74463030566391,3.58646378851925,3.31540698637377,0,2.0453736500431,9.96986924234663,1.24415835064723,0.718946809178615,1.07412704805365,0.511572370226872,3.15658898038188,2.3948309234694,0,2.90799823828566,1.39152147242777,1.99613798001194,0,0.61221999997337,0,0.227586896570999,0.254253650292766,0.945550727071745,1.03423011972439,2.04123229368278,0.868124974666461,1.77148277162768,2.53252521113357,4.5774520895125,1.54810963903714,1.77328571372128,2.63262476584767,1.96089234334182,0.83654246567162,6.61772223132655,0.683652335082007,0,0.628303510868405,2.93347904189422,0.957003479195758,0.549585560411174,1.5991043280559,0,0.156980256395025,0.332423363800313,0,0,0.167821586975843,0,0.953619473882272,1.26598838716816,1.14262965711403,0.282706142867882,0.865554558968364,0,1.76915129006678,1.22206028986725,6.52346483097368,2.84197059576957,2.40170483862547,2.56124305326573,2.40773294189637,2.34264445725339,1.27718352450966,0.19566461893209,2.42780379534093,2.36750641709634,3.62972148145992,0.91821828489147,1.70603764996917,6.61423045423767,1.03688191397247,0.664653872707185,0.661983911750998,1.2557316736289,2.38944859545918,1.70765727617876,3.32819215231533,0.867798691675654,1.56787835863004,0.34823682632161,6.46488672495512,0.687944129886466,0.290268993867255,0.146178634172371,0.492692742319255,1.35784623083787,2.47117154736201,2.25980740780532,0.685209623233754,0.596143835108969,3.22885059374981,2.15106521008283,0.64127056201227,1.49417096317547,0.599428828746391,1.00863292007874,0.80175617316141,1.54435498075768,0.720273989940749,2.73355578243952,1.17847017308398,0.135904206073614,0.313808538937,0.203996435272644,1.73370353940911,2.40168115483916,6.16074205013969,14.052124687367,0,1.05154941711726,3.35138881526705,3.66656678418694,3.58936512288407,0.399358000997982,0.429226048136571,0.669514372325618,3.49354056930977,1.80149941771202,1.16495949527454,0.472699093843342,1.07140615895516,0.741438982396034,1.67326718575073,1.86281330544726,3.97614844904652,3.40508515278939,0.321506296930038,0.687697182986169,0.83088067605837,1.799791132412,3.0952078182318,2.30848315300494,0,0.709251365692784,2.8850023474249,1.16160370171347,0.717149357331379,1.15149118391667,0.714695326373367,0.662091970365432,0.5085370753095,0,0,0,0,1.31348033198942,0.170388021785422,0.113312091520126,1.17241786942466,0,2.19781025814636,4.49590845925146,1.02652102730598,0,1.06787412567695,5.81655928868764,1.65695622138878,0.496166021811951,0.988058159489721,2.31405936923702,1.91502377331055,4.35214242695579,1.7548292581589,2.14441903734423,1.31149052283922,2.35581144375351,1.77213635993397,1.95242023843141,3.505346059782,1.14681839138014,2.77322628842131,2.73224172942087,2.49027542885215,0.124980407962107,2.57803499820801,3.14011866899464,1.6468607378872,1.40500471742064,0.724605143054126,0.447764408660622,2.57084640831947,0,0.189403005275089,0.251567901752575,0.889811221596536,1.37304041038154,1.05861646634267,0.310874401165561,0.443565449968902,0.63718706865481,2.69881867298163,0.465788870628778,0,1.32920857278997,1.5652351854352,0.150257608997218,0.380805212168795,0,1.09109195521536,0.214821114084977,2.32016879939247,0.398095888698616,0,1.03018711554838,0.673498977531838,1.26184898228651,0,2.78774068787403,6.7858515910955,0.680117776536817,0.231522474323834,1.46842022703881,0.179088841081487,0.926404341482917,0.219284049578707,1.06013487567529,0.192914038270915,0,0.256241518587947,0.345430341731199,0.607719912354764,3.594719339945,2.92290463259083,4.78313425128107,4.08913485639611,0.982829546539238,0,0.845248493434508,0.39997479170986,0.426766918776564,5.5108793491461,0.567515953566836,0.368211900503681,1.39879507719444,0,3.19735928259129,0.215649622793364,2.35898912783845,2.40261204022431,2.54598794931038,1.48802444071178,0.991486114072017,2.23457967189298,0.318004350653419,4.10081074006517,0.80057074828547,0.705351887381368,1.2249819094128,2.376481328569,5.6678630530234,4.31011419454308,1.43581454968528,1.51243017733031,1.86724581653388,1.45328081068666,2.85538840518309,0.588886311006154,1.1796972334774,0.366857197043358,1.38630799380406,1.52552838186867,0.690359926060101,2.78482710962785,3.45967510406583,0.20170506870352,0.781514011233092,0.523813388962845,0.982631505060581,0.591424344868181,2.83657855397258,1.56215619722769,4.13373593002368,1.39514782426595,1.64092442705466,0,3.47347824872506,1.05522746615772,1.40538670403555,1.60710550763486,0.672567444437648,1.82089681270989,3.64259506162076,1.24183318227694,2.30467975111558,1.71488009437418,2.58284985311961,0.986591603442736,0.354581522651905,0.333694205676207,2.35479278551542,1.72827148907602,1.12108865325516,2.73947616152849,0.647782773655864,3.34426181520935,3.35939757630285,0.316027223465453,0.813689977576877,0.695433089210318,0.801711364730253,1.45051314914126,2.3900586793153,1.38251932362818,6.02318302348389,0.354996002191696,0.511280428554946,3.81048345171836,0.9164274741762,0.31020638566432,0.955538938977433,2.01339777236026,0.98150233615243,0.121917924982269,0,0.615976841137482,0,0.971421986118279,0.233939463462106,3.97901550322736,0.475680363110274,1.46829906650648,0.769583617218004,1.81155412280008,0.694567422971502,0.655678681511872,1.88126918544609,2.94177986104687,0.942706188406504,1.96308467114945,6.23797440686881,0.4226557275834,0.509781344063451,1.59772660565751,2.77168918286382,1.69899965072379,0.892769693028288,3.17605384544123,0.722172300202514,0.730336388246517,1.37618785021362,5.73358332605805,1.41994405973866,1.69978725477287,0.872701380680755,3.1741610430924,1.11598505450025,2.31087814315709,0.432626562123789,0.504665699340316,0.655593431782173,1.26698501011437,0.509944148709909,1.87052183685892,0.735159196278759,2.25636785363138,1.66713136080127,1.33982065078089,2.48750831837634,5.48194878068045,2.98527574661373,2.61870874610114,1.61472274590015,3.1037357147929,1.56984607612859,1.33659032384146,1.81905470062397,1.30630048738177,0.684466602170562,2.42467390852515,1.43444410785353,5.65522606128223,1.22104902916462,0.853818767021724,0,0.808426818959282,2.34640942403454,7.94569387188632,6.91723503136755,1.33151354837103,1.61019034872821,1.28227396921293 | |||
|short_description=p3@ACAD11 | |||
}} |
Revision as of 21:25, 21 January 2014
Short description: | p3@ACAD11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACAD11_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000485198, ENST00000489991, ENST00000545291_5end |
EntrezGene: | ACAD11 |
HGNC: | 30211 |
UniProt: | F8WEV0Q08AE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.99e-11 | 53 |
common lymphoid progenitor | 1.99e-11 | 53 |
lymphoid lineage restricted progenitor cell | 3.86e-11 | 52 |
lymphocyte of B lineage | 2.07e-07 | 24 |
pro-B cell | 2.07e-07 | 24 |
mature alpha-beta T cell | 2.96e-07 | 18 |
alpha-beta T cell | 2.96e-07 | 18 |
immature T cell | 2.96e-07 | 18 |
mature T cell | 2.96e-07 | 18 |
immature alpha-beta T cell | 2.96e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.15e-21 | 114 |
neural tube | 1.25e-12 | 56 |
neural rod | 1.25e-12 | 56 |
future spinal cord | 1.25e-12 | 56 |
neural keel | 1.25e-12 | 56 |
regional part of nervous system | 2.66e-12 | 53 |
regional part of brain | 2.66e-12 | 53 |
regional part of forebrain | 5.66e-11 | 41 |
forebrain | 5.66e-11 | 41 |
anterior neural tube | 5.66e-11 | 41 |
future forebrain | 5.66e-11 | 41 |
brain | 8.80e-10 | 68 |
future brain | 8.80e-10 | 68 |
brain grey matter | 2.33e-09 | 34 |
gray matter | 2.33e-09 | 34 |
telencephalon | 2.55e-09 | 34 |
nervous system | 7.80e-09 | 89 |
central nervous system | 1.44e-08 | 81 |
regional part of telencephalon | 1.70e-08 | 32 |
cerebral hemisphere | 2.50e-08 | 32 |
regional part of cerebral cortex | 1.37e-07 | 22 |
neurectoderm | 3.08e-07 | 86 |
neural plate | 4.20e-07 | 82 |
presumptive neural plate | 4.20e-07 | 82 |