FFCP PHASE1:Hg19::chr3:197686847..197686894,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84223 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25251 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H095 | |||
|association_with_transcript=0bp_to_ENST00000265239,ENST00000493624,NM_032263,uc003fyp.2_5end | |||
|description=CAGE_peak_2_at_IQCG_5end | |||
|id=chr3:197686847..197686894,- | |||
|ontology_enrichment_celltype=CL:0000738!2.84e-18!140;CL:0002031!2.26e-17!124;CL:0002087!1.18e-16!119;CL:0000557!2.74e-14!71;CL:0000839!1.37e-13!70;CL:0002009!2.26e-12!65;CL:0000037!2.86e-12!172;CL:0000566!2.86e-12!172;CL:0002194!3.36e-12!63;CL:0000576!3.36e-12!63;CL:0000040!3.36e-12!63;CL:0000559!3.36e-12!63;CL:0000766!7.17e-12!76;CL:0002057!1.62e-11!42;CL:0002032!2.86e-11!165;CL:0000837!2.86e-11!165;CL:0000860!5.17e-11!45;CL:0000988!7.64e-11!182;CL:0000763!5.49e-07!112;CL:0000049!5.49e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.07e-10;39!CL:0000234;1.07e-10;39!CL:0000860;3.93e-10;33!CL:0002057;3.93e-10;33!CL:0000576;5.57e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.12e-18,136;CL:0002031,1.12e-17,120;CL:0002087,6.08e-17,115;CL:0000557,5.93e-15,67;CL:0000473,9.40e-15,48;CL:0000234,9.40e-15,48;CL:0000839,3.27e-14,66;CL:0002009,6.04e-13,61;CL:0002194,8.92e-13,59;CL:0000576,8.92e-13,59;CL:0000040,8.92e-13,59;CL:0000559,8.92e-13,59;CL:0000766,1.96e-12,72;CL:0000037,3.02e-12,168;CL:0000860,7.38e-12,42;CL:0002057,7.38e-12,42;CL:0002032,3.19e-11,161;CL:0000837,3.19e-11,161;CL:0000988,7.69e-11,177;CL:0000763,5.13e-07,108;CL:0000049,5.13e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.63e-27!115;UBERON:0001049!4.50e-17!57;UBERON:0005068!4.50e-17!57;UBERON:0006241!4.50e-17!57;UBERON:0007135!4.50e-17!57;UBERON:0002616!1.39e-15!59;UBERON:0002390!4.09e-15!102;UBERON:0003061!4.09e-15!102;UBERON:0001017!1.18e-14!82;UBERON:0000955!1.87e-14!69;UBERON:0006238!1.87e-14!69;UBERON:0002193!3.67e-14!112;UBERON:0005743!8.52e-14!86;UBERON:0000073!9.10e-14!94;UBERON:0001016!9.10e-14!94;UBERON:0003080!1.52e-13!42;UBERON:0002780!4.77e-13!41;UBERON:0001890!4.77e-13!41;UBERON:0006240!4.77e-13!41;UBERON:0002371!1.51e-12!80;UBERON:0001474!5.76e-12!86;UBERON:0002020!8.33e-12!34;UBERON:0003528!8.33e-12!34;UBERON:0001893!2.09e-11!34;UBERON:0002791!2.78e-11!33;UBERON:0004765!5.18e-11!101;UBERON:0001434!5.18e-11!101;UBERON:0001869!2.46e-10!32;UBERON:0002619!2.26e-09!22;UBERON:0003075!4.59e-09!86;UBERON:0007284!4.59e-09!86;UBERON:0002405!5.03e-09!115;UBERON:0002346!1.82e-08!90;UBERON:0001950!3.01e-08!20;UBERON:0000956!6.87e-08!25;UBERON:0000203!6.87e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.55e-10;34!UBERON:0002020;4.55e-10;34!UBERON:0002780;6.67e-10;41!UBERON:0001890;6.67e-10;41!UBERON:0001893;9.10e-10;34!UBERON:0002791;9.36e-10;32!UBERON:0000073;1.79e-09;53!UBERON:0002616;1.79e-09;53!UBERON:0002619;1.82e-09;22!UBERON:0001869;2.30e-09;32!UBERON:0001950;2.78e-08;20!UBERON:0000956;8.71e-08;25!UBERON:0000203;8.71e-08;25!UBERON:0007023;1.68e-07;114!UBERON:0001017;3.02e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.03e-27,114;UBERON:0001049,8.22e-17,56;UBERON:0005068,8.22e-17,56;UBERON:0006241,8.22e-17,56;UBERON:0007135,8.22e-17,56;UBERON:0000073,2.21e-15,53;UBERON:0002616,2.21e-15,53;UBERON:0002390,3.59e-15,98;UBERON:0003061,3.59e-15,98;UBERON:0001017,1.05e-14,81;UBERON:0001016,1.88e-14,89;UBERON:0002193,2.60e-14,108;UBERON:0000955,3.17e-14,68;UBERON:0006238,3.17e-14,68;UBERON:0002780,2.93e-13,41;UBERON:0001890,2.93e-13,41;UBERON:0003080,2.93e-13,41;UBERON:0006240,2.93e-13,41;UBERON:0002371,9.50e-13,76;UBERON:0001474,4.02e-12,82;UBERON:0003528,5.16e-12,34;UBERON:0002020,5.16e-12,34;UBERON:0002405,1.30e-11,93;UBERON:0001893,1.33e-11,34;UBERON:0002791,5.67e-11,32;UBERON:0004765,1.12e-10,90;UBERON:0001869,1.69e-10,32;UBERON:0001434,1.85e-10,100;UBERON:0002619,1.22e-09,22;UBERON:0003075,2.85e-09,82;UBERON:0007284,2.85e-09,82;UBERON:0002346,1.08e-08,86;UBERON:0001950,1.78e-08,20;UBERON:0000956,5.61e-08,25;UBERON:0000203,5.61e-08,25;UBERON:0003056,3.31e-07,61 | |||
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| |||
|short_description=p2@IQCG | |||
}} |
Revision as of 23:40, 21 January 2014
Short description: | p2@IQCG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IQCG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265239, ENST00000493624, NM_032263, uc003fyp.2_5end |
EntrezGene: | IQCG |
HGNC: | 25251 |
UniProt: | Q9H095 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.12e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 1.12e-17 | 120 |
nongranular leukocyte | 6.08e-17 | 115 |
granulocyte monocyte progenitor cell | 5.93e-15 | 67 |
defensive cell | 9.40e-15 | 48 |
phagocyte | 9.40e-15 | 48 |
myeloid lineage restricted progenitor cell | 3.27e-14 | 66 |
macrophage dendritic cell progenitor | 6.04e-13 | 61 |
monopoietic cell | 8.92e-13 | 59 |
monocyte | 8.92e-13 | 59 |
monoblast | 8.92e-13 | 59 |
promonocyte | 8.92e-13 | 59 |
myeloid leukocyte | 1.96e-12 | 72 |
hematopoietic stem cell | 3.02e-12 | 168 |
classical monocyte | 7.38e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.38e-12 | 42 |
hematopoietic oligopotent progenitor cell | 3.19e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.19e-11 | 161 |
hematopoietic cell | 7.69e-11 | 177 |
myeloid cell | 5.13e-07 | 108 |
common myeloid progenitor | 5.13e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.03e-27 | 114 |
neural tube | 8.22e-17 | 56 |
neural rod | 8.22e-17 | 56 |
future spinal cord | 8.22e-17 | 56 |
neural keel | 8.22e-17 | 56 |
regional part of nervous system | 2.21e-15 | 53 |
regional part of brain | 2.21e-15 | 53 |
hematopoietic system | 3.59e-15 | 98 |
blood island | 3.59e-15 | 98 |
central nervous system | 1.05e-14 | 81 |
nervous system | 1.88e-14 | 89 |
hemolymphoid system | 2.60e-14 | 108 |
brain | 3.17e-14 | 68 |
future brain | 3.17e-14 | 68 |
regional part of forebrain | 2.93e-13 | 41 |
forebrain | 2.93e-13 | 41 |
anterior neural tube | 2.93e-13 | 41 |
future forebrain | 2.93e-13 | 41 |
bone marrow | 9.50e-13 | 76 |
bone element | 4.02e-12 | 82 |
brain grey matter | 5.16e-12 | 34 |
gray matter | 5.16e-12 | 34 |
immune system | 1.30e-11 | 93 |
telencephalon | 1.33e-11 | 34 |
regional part of telencephalon | 5.67e-11 | 32 |
skeletal element | 1.12e-10 | 90 |
cerebral hemisphere | 1.69e-10 | 32 |
skeletal system | 1.85e-10 | 100 |
regional part of cerebral cortex | 1.22e-09 | 22 |
neural plate | 2.85e-09 | 82 |
presumptive neural plate | 2.85e-09 | 82 |
neurectoderm | 1.08e-08 | 86 |
neocortex | 1.78e-08 | 20 |
cerebral cortex | 5.61e-08 | 25 |
pallium | 5.61e-08 | 25 |
pre-chordal neural plate | 3.31e-07 | 61 |