FFCP PHASE1:Hg19::chr6:32908765..32908786,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3109 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4935 | |||
|TSSclassifier=strong | |||
|UniProt=E9PD01 | |||
|association_with_transcript=0bp_to_ENST00000416244_5end | |||
|coexpression_cluster_id=C691 | |||
|description=CAGE_peak_2_at_HLA-DMB_5end | |||
|id=chr6:32908765..32908786,- | |||
|ontology_enrichment_celltype=CL:0000738!1.94e-51!140;CL:0002087!1.04e-47!119;CL:0002031!8.81e-44!124;CL:0000037!8.62e-43!172;CL:0000566!8.62e-43!172;CL:0000988!6.47e-40!182;CL:0002032!1.22e-39!165;CL:0000837!1.22e-39!165;CL:0002009!4.03e-33!65;CL:0000557!1.17e-31!71;CL:0002194!1.68e-31!63;CL:0000576!1.68e-31!63;CL:0000040!1.68e-31!63;CL:0000559!1.68e-31!63;CL:0002057!1.06e-30!42;CL:0000766!5.92e-30!76;CL:0000839!7.62e-28!70;CL:0000860!4.01e-27!45;CL:0000763!7.35e-24!112;CL:0000049!7.35e-24!112;CL:0000542!2.65e-14!53;CL:0000051!2.65e-14!53;CL:0000838!7.61e-14!52;CL:0000945!1.05e-13!24;CL:0000826!1.05e-13!24;CL:0000236!4.07e-11!14;CL:0000451!2.67e-09!10;CL:0000990!5.42e-08!8;CL:0002393!3.01e-07!9;CL:0002397!3.01e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.26e-26;39!CL:0000234;1.26e-26;39!CL:0000860;4.41e-26;33!CL:0002057;4.41e-26;33!CL:0000576;1.03e-22;48!CL:0002087;5.71e-16;104!CL:0000945;9.30e-16;24!CL:0000766;1.35e-15;69!CL:0000738;2.35e-13;136!CL:0000236;4.61e-12;13!CL:0000451;1.47e-10;10!CL:0000990;4.82e-09;8!CL:0000542;3.02e-08;53!CL:0000763;8.10e-08;100!CL:0000988;9.53e-08;177!CL:0000235;3.47e-07;6!CL:0000840;5.71e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.87e-57,136;CL:0002087,2.01e-55,115;CL:0002031,6.83e-49,120;CL:0000037,1.92e-46,168;CL:0000988,2.07e-44,177;CL:0002009,6.43e-44,61;CL:0002032,9.56e-43,161;CL:0000837,9.56e-43,161;CL:0002194,5.80e-42,59;CL:0000576,5.80e-42,59;CL:0000040,5.80e-42,59;CL:0000559,5.80e-42,59;CL:0000473,2.45e-41,48;CL:0000234,2.45e-41,48;CL:0000557,2.88e-39,67;CL:0000766,2.09e-36,72;CL:0000860,1.78e-35,42;CL:0002057,1.78e-35,42;CL:0000839,7.78e-35,66;CL:0000763,7.83e-28,108;CL:0000049,7.83e-28,108;CL:0000945,7.90e-16,24;CL:0000826,7.90e-16,24;CL:0000542,3.00e-13,53;CL:0000051,3.00e-13,53;CL:0000838,9.50e-13,52;CL:0000236,1.13e-12,14;CL:0000451,1.46e-10,10;CL:0000990,4.82e-09,8;CL:0002393,3.52e-08,9;CL:0002397,3.52e-08,9;CL:0000235,3.47e-07,6;CL:0000840,5.79e-07,5;CL:0001029,5.79e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.34e-25;42!CL:0000049;1.42e-08;108!CL:0000051;3.02e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.03e-36!102;UBERON:0003061!1.03e-36!102;UBERON:0007023!1.23e-36!115;UBERON:0002193!2.32e-32!112;UBERON:0002371!1.11e-26!80;UBERON:0001474!9.26e-23!86;UBERON:0002405!5.18e-21!115;UBERON:0004765!1.45e-16!101;UBERON:0001434!1.45e-16!101;UBERON:0001049!2.40e-12!57;UBERON:0005068!2.40e-12!57;UBERON:0006241!2.40e-12!57;UBERON:0007135!2.40e-12!57;UBERON:0002616!3.34e-09!59;UBERON:0000178!5.94e-09!15;UBERON:0000179!5.94e-09!15;UBERON:0000463!5.94e-09!15;UBERON:0003080!7.22e-09!42;UBERON:0002780!8.88e-09!41;UBERON:0001890!8.88e-09!41;UBERON:0006240!8.88e-09!41;UBERON:0003081!1.72e-08!216;UBERON:0000955!4.49e-07!69;UBERON:0006238!4.49e-07!69;UBERON:0002020!4.73e-07!34;UBERON:0003528!4.73e-07!34;UBERON:0001893!5.05e-07!34;UBERON:0001017!6.70e-07!82;UBERON:0002791!7.62e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.00e-10;15!UBERON:0000179;4.00e-10;15!UBERON:0000463;4.00e-10;15!UBERON:0007023;1.40e-09;114!UBERON:0000073;6.98e-07;53!UBERON:0002616;6.98e-07;53!UBERON:0002390;8.60e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.34e-45,98;UBERON:0003061,7.34e-45,98;UBERON:0002193,2.62e-40,108;UBERON:0007023,3.58e-36,114;UBERON:0002371,6.27e-33,76;UBERON:0002405,4.07e-31,93;UBERON:0001474,1.26e-28,82;UBERON:0004765,7.44e-24,90;UBERON:0001434,7.62e-20,100;UBERON:0003081,2.69e-14,203;UBERON:0001049,1.14e-11,56;UBERON:0005068,1.14e-11,56;UBERON:0006241,1.14e-11,56;UBERON:0007135,1.14e-11,56;UBERON:0000073,1.26e-10,53;UBERON:0002616,1.26e-10,53;UBERON:0000178,3.70e-10,15;UBERON:0000179,3.70e-10,15;UBERON:0000463,3.70e-10,15;UBERON:0002780,1.05e-07,41;UBERON:0001890,1.05e-07,41;UBERON:0003080,1.05e-07,41;UBERON:0006240,1.05e-07,41;UBERON:0000479,1.25e-07,773 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,2.6893005858071,0,0,0,1.10808952269109,0,5.01527554364941,0.286235987131057,0,0.125542639594803,8.78754166101439,10.590976039043,10.8620878212877,40.909884792286,18.039981710569,39.7877436922315,0,0,0,12.3947520928483,6.82412315939623,21.139231632109,36.5636969631039,29.0789448831705,29.9475001587876,328.260085235729,361.465331277181,254.742236390211,52.1979677218637,49.501748623234,40.2689541571775,57.6424011526098,44.817299794379,47.3850747469508,67.8954045880275,72.4934799477355,64.5596487595838,68.2596447858505,56.1571674717929,67.7132432971709,59.4845792954631,55.3999484617427,61.124787769063,72.5418824919039,70.6043859567406,61.376364076708,56.4045723319285,64.4267614117871,49.8682958123252,73.7131466116603,48.795129323438,50.4486021686416,61.5559229879021,61.0135014551636,58.2066103809713,64.1723472791371,65.9216968417741,70.5711123993172,101.19128214342,80.3644253867865,123.698600849942,92.4464634335655,87.4029516337567,72.165788426989,24.5110959617474,21.2840844603026,28.8609362948122,191.835906462842,192.786929775532,198.360563611573,203.123585941657,189.387301868034,188.51880030507,203.601820817738,166.005353289153,62.6134266020393,59.8981933158358,68.8091810625412,7.93027971474155,16.8152568894461,17.3833495951551,0.393419540227666,0,1.23360899399706,0,0.977766799900771,0,1.94826728407911,1.00269411196656,1.17842362989935,1.10766947291811,1.35401931882508,1.15282187753108,1.43065282315866,0.328875809207352,0.829050053357545,0,0.14828656316206,0.535081656179426,0,0.453237370790265,0,0,0.253019692019503,3.82278497188916,1.30216690771284,0.950452044448374,12.3471597643774,4.99147783502232,6.24653632761729,8.05042656949657,0.821127996921047,0,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.175669571386252,14.9971041444881,0,0,109.697019055283,114.751496880217,118.199626901271,57.4762404575874,45.1875979516301,57.9473702074121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,7.08947888017685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,253.603516270019,55.9270193682778,116.229568909785,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,345.411537020981,235.558575881667,225.592315246844,0,0,0,0,0,0.179060963239896,2.57795831185113,4.3346767244424,1.2937654491571,4.62034930607094,0,0,0,1.17261385734044,0.637938751653163,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8460032653609,28.2585603072388,31.2711744364092,0,0,0,0,0,0,0,0,0,0,0,0,0.410635780069046,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,5.35813260568156,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.511359764496605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3375289733965,0,0,0,0,0,0.844430541190656,0,0,0,0,2.68120910214315,0,3.85989583184795,0,0,0,0,29.939408944698,18.351292971417,27.912712171534,32.3995214622593,35.7885177584989,29.1812990036723,29.1616976108582,34.1043825806536,0.106824071127473,0,0,13.192025433926,1.58696134274089,0,0,0.59873811429845,7.66021480529467,0,0,3.08876895924805,1.82587743226554,0,2.50634477090067,1.52362600021443,0.321176150207399,5.85219150854038,5.53600108997424,0,0,0,0,0.976940477010201,0,0,0,0,0,0,9.08350711485743,0,6.57515967237122,0,0.47748896947538,1.18785872333055,0,1.9882952955326,8.15882615180974,0,2.63686198762815,0,11.556383318562,25.4181202288656,0,0,2.70786572014353,0,0.0898683511473268,0.179021174675609,0,3.35387579165574,16.7638164642858,0,2.90799823828566,5.28778159522552,0,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0,0.885741385813839,6.0298219312704,1.52581736317083,1.54810963903714,1.77328571372128,1.75508317723178,0,0,4.54006525172403,0.113942055847001,0,0,0,3.19001159731919,0.824378340616761,11.72676507241,0,0,0,0,0,0,0,0,0.421996129056054,15.6703495832782,0,0,8.95735737970654,10.7918228694074,4.888241159469,1.77912677208373,3.70691816839509,5.11667552576731,10.5145767449856,4.01288823649394,3.74823113160543,10.399922985293,0.19566461893209,0,1.57833761139756,10.8891644443797,0.61214552326098,25.4641915902806,0.150323419414493,0.207376382794494,0,0,0,0,66.5986337709715,0,0.347119476670262,0.195984794828755,0,12.7550467816682,0,0,0,0,2.81268147816416,0,1.58186518546373,0,0,2.9756074099263,0,0.160317640503067,8.96502577905281,0,2.3054466744657,0.114536596165916,0,1.1524383839052,0,0.235694034616795,0,0,0.407992870545287,0,1.80126086612937,10.8155249324675,21.7169199713853,0,3.15464825135177,5.02708322290058,2.7499250881402,2.15361907373044,0.798716001995964,0.858452096273142,0.446342914883745,1.14211903227435,0,0,0,0,0,0.0984274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| |||
|short_description=p2@HLA-DMB | |||
}} |
Revision as of 11:19, 22 January 2014
Short description: | p2@HLA-DMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HLA-DMB_5end |
Coexpression cluster: | C691_Monocytederived_CD14_Macrophage_CD19_Dendritic_immature_Whole |
Association with transcript: | 0bp_to_ENST00000416244_5end |
EntrezGene: | HLA-DMB |
HGNC: | 4935 |
UniProt: | E9PD01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.34e-45 | 98 |
blood island | 7.34e-45 | 98 |
hemolymphoid system | 2.62e-40 | 108 |
adult organism | 3.58e-36 | 114 |
bone marrow | 6.27e-33 | 76 |
immune system | 4.07e-31 | 93 |
bone element | 1.26e-28 | 82 |
skeletal element | 7.44e-24 | 90 |
skeletal system | 7.62e-20 | 100 |
lateral plate mesoderm | 2.69e-14 | 203 |
neural tube | 1.14e-11 | 56 |
neural rod | 1.14e-11 | 56 |
future spinal cord | 1.14e-11 | 56 |
neural keel | 1.14e-11 | 56 |
regional part of nervous system | 1.26e-10 | 53 |
regional part of brain | 1.26e-10 | 53 |
blood | 3.70e-10 | 15 |
haemolymphatic fluid | 3.70e-10 | 15 |
organism substance | 3.70e-10 | 15 |
regional part of forebrain | 1.05e-07 | 41 |
forebrain | 1.05e-07 | 41 |
anterior neural tube | 1.05e-07 | 41 |
future forebrain | 1.05e-07 | 41 |
tissue | 1.25e-07 | 773 |