FFCP PHASE1:Hg19::chr8:71315615..71315638,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10499 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7669 | |||
|TSSclassifier=strong | |||
|UniProt=Q569J4 | |||
|association_with_transcript=-127bp_to_BC092442_5end | |||
|description=CAGE_peak_3_at_NCOA2_5end | |||
|id=chr8:71315615..71315638,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.56e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.29e-28!115;UBERON:0001049!2.93e-17!57;UBERON:0005068!2.93e-17!57;UBERON:0006241!2.93e-17!57;UBERON:0007135!2.93e-17!57;UBERON:0003080!4.52e-16!42;UBERON:0002780!7.77e-16!41;UBERON:0001890!7.77e-16!41;UBERON:0006240!7.77e-16!41;UBERON:0001017!7.97e-15!82;UBERON:0002616!1.23e-14!59;UBERON:0000073!7.12e-14!94;UBERON:0001016!7.12e-14!94;UBERON:0005743!9.68e-14!86;UBERON:0000955!9.81e-14!69;UBERON:0006238!9.81e-14!69;UBERON:0002020!1.55e-12!34;UBERON:0003528!1.55e-12!34;UBERON:0001893!1.97e-12!34;UBERON:0001869!5.54e-12!32;UBERON:0002791!6.88e-12!33;UBERON:0002346!1.62e-10!90;UBERON:0002619!3.15e-10!22;UBERON:0003075!6.02e-10!86;UBERON:0007284!6.02e-10!86;UBERON:0000062!8.75e-10!511;UBERON:0000153!1.43e-09!129;UBERON:0007811!1.43e-09!129;UBERON:0001950!4.38e-09!20;UBERON:0000033!6.58e-09!123;UBERON:0003056!9.10e-09!61;UBERON:0000924!9.71e-09!173;UBERON:0006601!9.71e-09!173;UBERON:0000956!2.29e-08!25;UBERON:0000203!2.29e-08!25;UBERON:0004121!3.07e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.06e-12;41!UBERON:0001890;1.06e-12;41!UBERON:0001869;2.12e-11;32!UBERON:0003528;2.18e-11;34!UBERON:0002020;2.18e-11;34!UBERON:0002791;2.37e-11;32!UBERON:0001893;4.44e-11;34!UBERON:0002619;1.30e-10;22!UBERON:0000073;7.39e-10;53!UBERON:0002616;7.39e-10;53!UBERON:0001950;2.20e-09;20!UBERON:0007023;6.89e-09;114!UBERON:0000956;7.84e-09;25!UBERON:0000203;7.84e-09;25!UBERON:0001017;1.88e-07;75!UBERON:0000955;1.98e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.39e-28,114;UBERON:0001049,5.03e-17,56;UBERON:0005068,5.03e-17,56;UBERON:0006241,5.03e-17,56;UBERON:0007135,5.03e-17,56;UBERON:0002780,7.27e-16,41;UBERON:0001890,7.27e-16,41;UBERON:0003080,7.27e-16,41;UBERON:0006240,7.27e-16,41;UBERON:0000073,8.72e-16,53;UBERON:0002616,8.72e-16,53;UBERON:0001016,1.65e-14,89;UBERON:0001017,2.00e-14,81;UBERON:0000955,2.73e-13,68;UBERON:0006238,2.73e-13,68;UBERON:0003528,1.73e-12,34;UBERON:0002020,1.73e-12,34;UBERON:0001893,2.20e-12,34;UBERON:0001869,6.41e-12,32;UBERON:0002791,1.23e-11,32;UBERON:0011216,8.22e-11,223;UBERON:0002619,3.68e-10,22;UBERON:0002346,7.19e-10,86;UBERON:0003075,2.72e-09,82;UBERON:0007284,2.72e-09,82;UBERON:0001950,5.39e-09,20;UBERON:0000956,3.10e-08,25;UBERON:0000203,3.10e-08,25;UBERON:0003056,3.93e-08,61;UBERON:0004121,7.70e-08,171;UBERON:0000924,7.70e-08,171;UBERON:0006601,7.70e-08,171;UBERON:0010371,6.02e-07,104 | |||
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| |||
|short_description=p3@NCOA2 | |||
}} |
Revision as of 22:28, 22 January 2014
Short description: | p3@NCOA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NCOA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -127bp_to_BC092442_5end |
EntrezGene: | NCOA2 |
HGNC: | 7669 |
UniProt: | Q569J4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.39e-28 | 114 |
neural tube | 5.03e-17 | 56 |
neural rod | 5.03e-17 | 56 |
future spinal cord | 5.03e-17 | 56 |
neural keel | 5.03e-17 | 56 |
regional part of forebrain | 7.27e-16 | 41 |
forebrain | 7.27e-16 | 41 |
anterior neural tube | 7.27e-16 | 41 |
future forebrain | 7.27e-16 | 41 |
regional part of nervous system | 8.72e-16 | 53 |
regional part of brain | 8.72e-16 | 53 |
nervous system | 1.65e-14 | 89 |
central nervous system | 2.00e-14 | 81 |
brain | 2.73e-13 | 68 |
future brain | 2.73e-13 | 68 |
brain grey matter | 1.73e-12 | 34 |
gray matter | 1.73e-12 | 34 |
telencephalon | 2.20e-12 | 34 |
cerebral hemisphere | 6.41e-12 | 32 |
regional part of telencephalon | 1.23e-11 | 32 |
organ system subdivision | 8.22e-11 | 223 |
regional part of cerebral cortex | 3.68e-10 | 22 |
neurectoderm | 7.19e-10 | 86 |
neural plate | 2.72e-09 | 82 |
presumptive neural plate | 2.72e-09 | 82 |
neocortex | 5.39e-09 | 20 |
cerebral cortex | 3.10e-08 | 25 |
pallium | 3.10e-08 | 25 |
pre-chordal neural plate | 3.93e-08 | 61 |
ectoderm-derived structure | 7.70e-08 | 171 |
ectoderm | 7.70e-08 | 171 |
presumptive ectoderm | 7.70e-08 | 171 |
ecto-epithelium | 6.02e-07 | 104 |