FFCP PHASE1:Hg19::chr10:104403399..104403446,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:104403399..104403446,+ | |||
|description=CAGE_peak_at_chr10:104403399..104403446,+ | |description=CAGE_peak_at_chr10:104403399..104403446,+ | ||
|id=chr10:104403399..104403446,+ | |id=chr10:104403399..104403446,+ | ||
|ontology_enrichment_celltype=CL:0000222!2.30e-19!119;CL:0000055!1.28e-15!180;CL:0000183!6.26e-15!59;CL:0000187!1.01e-12!54;CL:0000192!2.63e-12!42;CL:0000514!2.63e-12!42;CL:0000680!3.01e-12!57;CL:0000056!3.01e-12!57;CL:0000355!3.01e-12!57;CL:0000359!2.64e-11!32;CL:0000220!3.06e-11!246;CL:0002321!6.44e-11!248;CL:0000393!5.15e-10!60;CL:0000211!5.15e-10!60;CL:0000057!4.52e-09!75;CL:1000449!1.29e-08!16;CL:1000497!2.62e-08!18;CL:0002518!2.62e-08!18;CL:1000507!3.66e-07!12;CL:1000494!3.66e-07!12;CL:0002681!7.47e-07!13;CL:0002584!7.47e-07!13 | |ontology_enrichment_celltype=CL:0000222!2.30e-19!119;CL:0000055!1.28e-15!180;CL:0000183!6.26e-15!59;CL:0000187!1.01e-12!54;CL:0000192!2.63e-12!42;CL:0000514!2.63e-12!42;CL:0000680!3.01e-12!57;CL:0000056!3.01e-12!57;CL:0000355!3.01e-12!57;CL:0000359!2.64e-11!32;CL:0000220!3.06e-11!246;CL:0002321!6.44e-11!248;CL:0000393!5.15e-10!60;CL:0000211!5.15e-10!60;CL:0000057!4.52e-09!75;CL:1000449!1.29e-08!16;CL:1000497!2.62e-08!18;CL:0002518!2.62e-08!18;CL:1000507!3.66e-07!12;CL:1000494!3.66e-07!12;CL:0002681!7.47e-07!13;CL:0002584!7.47e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.18e-10;32!CL:0000192;3.48e-09;43!CL:1000449;7.44e-09;15!CL:1000497;1.67e-08;17!CL:0002518;1.67e-08;17!CL:0002681;4.52e-07;12!CL:0002584;4.52e-07;12!CL:0000187;5.93e-07;55!CL:1000507;6.23e-07;10!CL:1000494;6.23e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.27e-20,121;CL:0000187,1.09e-12,55;CL:0000192,3.05e-12,43;CL:0000514,3.05e-12,43;CL:0000680,3.17e-12,58;CL:0000056,3.17e-12,58;CL:0000355,3.17e-12,58;CL:0000359,2.64e-11,32;CL:0002321,2.95e-11,250;CL:0000393,5.13e-10,61;CL:0000211,5.13e-10,61;CL:0000057,3.27e-09,76;CL:1000449,7.82e-09,15;CL:1000497,1.78e-08,17;CL:0002518,1.78e-08,17;CL:0002681,4.72e-07,12;CL:0002584,4.72e-07,12;CL:1000507,6.15e-07,10;CL:1000494,6.15e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.48e-09;43!CL:0000355;4.66e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.12e-25!118;UBERON:0000483!3.68e-23!309;UBERON:0000119!1.44e-22!312;UBERON:0004111!2.16e-22!241;UBERON:0005256!2.06e-21!143;UBERON:0000025!3.37e-19!194;UBERON:0000475!1.38e-18!365;UBERON:0002100!1.94e-18!216;UBERON:0000468!4.59e-18!659;UBERON:0000467!7.71e-18!625;UBERON:0000477!9.89e-18!286;UBERON:0004872!1.13e-17!84;UBERON:0000480!1.36e-17!626;UBERON:0000055!1.45e-15!69;UBERON:0001981!3.52e-15!60;UBERON:0007500!3.52e-15!60;UBERON:0004537!3.52e-15!60;UBERON:0006965!3.52e-15!60;UBERON:0000486!2.88e-14!82;UBERON:0002049!3.16e-14!79;UBERON:0007798!3.16e-14!79;UBERON:0000490!1.13e-13!138;UBERON:0002050!1.75e-13!605;UBERON:0005423!1.75e-13!605;UBERON:0000923!1.99e-13!604;UBERON:0005291!1.99e-13!604;UBERON:0006598!1.99e-13!604;UBERON:0002532!1.99e-13!604;UBERON:0001637!5.02e-13!42;UBERON:0003509!5.02e-13!42;UBERON:0004572!5.02e-13!42;UBERON:0000914!5.65e-13!83;UBERON:0002329!5.65e-13!83;UBERON:0003077!5.65e-13!83;UBERON:0003059!5.65e-13!83;UBERON:0007282!5.65e-13!83;UBERON:0009618!5.65e-13!83;UBERON:0007285!5.65e-13!83;UBERON:0000922!5.93e-13!612;UBERON:0004290!1.89e-12!70;UBERON:0004535!2.67e-12!110;UBERON:0000481!3.17e-12!347;UBERON:0001009!4.34e-12!113;UBERON:0001134!1.14e-11!61;UBERON:0002036!1.14e-11!61;UBERON:0003082!1.14e-11!61;UBERON:0002385!3.79e-11!63;UBERON:0001015!3.79e-11!63;UBERON:0000383!3.79e-11!63;UBERON:0003103!3.18e-10!69;UBERON:0004573!7.01e-10!33;UBERON:0004571!7.01e-10!33;UBERON:0000926!1.07e-09!448;UBERON:0004120!1.07e-09!448;UBERON:0006603!1.07e-09!448;UBERON:0003104!1.27e-08!238;UBERON:0009142!1.27e-08!238;UBERON:0004211!1.29e-08!16;UBERON:0001285!1.29e-08!16;UBERON:0007684!1.29e-08!16;UBERON:0003220!1.29e-08!16;UBERON:0004208!1.29e-08!16;UBERON:0000353!2.49e-08!17;UBERON:0006555!2.51e-08!17;UBERON:0005103!2.51e-08!17;UBERON:0000083!2.51e-08!17;UBERON:0009201!2.51e-08!17;UBERON:0004819!2.51e-08!17;UBERON:0006553!2.51e-08!17;UBERON:0003074!2.51e-08!17;UBERON:0003060!2.51e-08!17;UBERON:0004876!6.75e-08!20;UBERON:0000080!1.13e-07!18;UBERON:0002120!1.13e-07!18;UBERON:0004875!1.13e-07!18;UBERON:0005721!1.13e-07!18;UBERON:0005754!1.13e-07!18;UBERON:0007297!1.13e-07!18;UBERON:0000466!1.45e-07!126;UBERON:0003064!1.83e-07!37;UBERON:0000058!2.44e-07!26;UBERON:0003886!3.16e-07!63;UBERON:0009569!3.21e-07!113;UBERON:0009773!3.66e-07!12;UBERON:0001231!3.66e-07!12;UBERON:0004810!3.66e-07!12;UBERON:0002553!6.88e-07!70;UBERON:0000062!6.99e-07!511;UBERON:0000948!7.19e-07!24;UBERON:0005498!7.19e-07!24;UBERON:0004140!7.19e-07!24;UBERON:0009881!7.19e-07!24;UBERON:0004141!7.19e-07!24;UBERON:0003084!7.19e-07!24;UBERON:0007005!7.19e-07!24;UBERON:0004139!7.19e-07!24;UBERON:0004291!7.19e-07!24;UBERON:0001225!7.47e-07!13;UBERON:0008987!7.47e-07!13;UBERON:0001008!8.31e-07!45 | |ontology_enrichment_uberon=UBERON:0003914!5.12e-25!118;UBERON:0000483!3.68e-23!309;UBERON:0000119!1.44e-22!312;UBERON:0004111!2.16e-22!241;UBERON:0005256!2.06e-21!143;UBERON:0000025!3.37e-19!194;UBERON:0000475!1.38e-18!365;UBERON:0002100!1.94e-18!216;UBERON:0000468!4.59e-18!659;UBERON:0000467!7.71e-18!625;UBERON:0000477!9.89e-18!286;UBERON:0004872!1.13e-17!84;UBERON:0000480!1.36e-17!626;UBERON:0000055!1.45e-15!69;UBERON:0001981!3.52e-15!60;UBERON:0007500!3.52e-15!60;UBERON:0004537!3.52e-15!60;UBERON:0006965!3.52e-15!60;UBERON:0000486!2.88e-14!82;UBERON:0002049!3.16e-14!79;UBERON:0007798!3.16e-14!79;UBERON:0000490!1.13e-13!138;UBERON:0002050!1.75e-13!605;UBERON:0005423!1.75e-13!605;UBERON:0000923!1.99e-13!604;UBERON:0005291!1.99e-13!604;UBERON:0006598!1.99e-13!604;UBERON:0002532!1.99e-13!604;UBERON:0001637!5.02e-13!42;UBERON:0003509!5.02e-13!42;UBERON:0004572!5.02e-13!42;UBERON:0000914!5.65e-13!83;UBERON:0002329!5.65e-13!83;UBERON:0003077!5.65e-13!83;UBERON:0003059!5.65e-13!83;UBERON:0007282!5.65e-13!83;UBERON:0009618!5.65e-13!83;UBERON:0007285!5.65e-13!83;UBERON:0000922!5.93e-13!612;UBERON:0004290!1.89e-12!70;UBERON:0004535!2.67e-12!110;UBERON:0000481!3.17e-12!347;UBERON:0001009!4.34e-12!113;UBERON:0001134!1.14e-11!61;UBERON:0002036!1.14e-11!61;UBERON:0003082!1.14e-11!61;UBERON:0002385!3.79e-11!63;UBERON:0001015!3.79e-11!63;UBERON:0000383!3.79e-11!63;UBERON:0003103!3.18e-10!69;UBERON:0004573!7.01e-10!33;UBERON:0004571!7.01e-10!33;UBERON:0000926!1.07e-09!448;UBERON:0004120!1.07e-09!448;UBERON:0006603!1.07e-09!448;UBERON:0003104!1.27e-08!238;UBERON:0009142!1.27e-08!238;UBERON:0004211!1.29e-08!16;UBERON:0001285!1.29e-08!16;UBERON:0007684!1.29e-08!16;UBERON:0003220!1.29e-08!16;UBERON:0004208!1.29e-08!16;UBERON:0000353!2.49e-08!17;UBERON:0006555!2.51e-08!17;UBERON:0005103!2.51e-08!17;UBERON:0000083!2.51e-08!17;UBERON:0009201!2.51e-08!17;UBERON:0004819!2.51e-08!17;UBERON:0006553!2.51e-08!17;UBERON:0003074!2.51e-08!17;UBERON:0003060!2.51e-08!17;UBERON:0004876!6.75e-08!20;UBERON:0000080!1.13e-07!18;UBERON:0002120!1.13e-07!18;UBERON:0004875!1.13e-07!18;UBERON:0005721!1.13e-07!18;UBERON:0005754!1.13e-07!18;UBERON:0007297!1.13e-07!18;UBERON:0000466!1.45e-07!126;UBERON:0003064!1.83e-07!37;UBERON:0000058!2.44e-07!26;UBERON:0003886!3.16e-07!63;UBERON:0009569!3.21e-07!113;UBERON:0009773!3.66e-07!12;UBERON:0001231!3.66e-07!12;UBERON:0004810!3.66e-07!12;UBERON:0002553!6.88e-07!70;UBERON:0000062!6.99e-07!511;UBERON:0000948!7.19e-07!24;UBERON:0005498!7.19e-07!24;UBERON:0004140!7.19e-07!24;UBERON:0009881!7.19e-07!24;UBERON:0004141!7.19e-07!24;UBERON:0003084!7.19e-07!24;UBERON:0007005!7.19e-07!24;UBERON:0004139!7.19e-07!24;UBERON:0004291!7.19e-07!24;UBERON:0001225!7.47e-07!13;UBERON:0008987!7.47e-07!13;UBERON:0001008!8.31e-07!45 | ||
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| ||
|short_description=p@chr10:104403399..104403446,+ | |short_description=p@chr10:104403399..104403446,+ | ||
}} | }} |
Latest revision as of 09:50, 23 July 2015
Short description: | p@chr10:104403399..104403446, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104403399..104403446, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.27e-20 | 121 |
muscle cell | 1.09e-12 | 55 |
smooth muscle cell | 3.05e-12 | 43 |
smooth muscle myoblast | 3.05e-12 | 43 |
muscle precursor cell | 3.17e-12 | 58 |
myoblast | 3.17e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.17e-12 | 58 |
vascular associated smooth muscle cell | 2.64e-11 | 32 |
embryonic cell | 2.95e-11 | 250 |
electrically responsive cell | 5.13e-10 | 61 |
electrically active cell | 5.13e-10 | 61 |
fibroblast | 3.27e-09 | 76 |
epithelial cell of nephron | 7.82e-09 | 15 |
kidney cell | 1.78e-08 | 17 |
kidney epithelial cell | 1.78e-08 | 17 |
kidney cortical cell | 4.72e-07 | 12 |
renal cortical epithelial cell | 4.72e-07 | 12 |
kidney tubule cell | 6.15e-07 | 10 |
nephron tubule epithelial cell | 6.15e-07 | 10 |