FFCP PHASE1:Hg19::chr11:102668178..102668206,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:102668178..102668206,+ | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_at_chr11:102668178..102668206,+ | |description=CAGE_peak_at_chr11:102668178..102668206,+ | ||
|id=chr11:102668178..102668206,+ | |id=chr11:102668178..102668206,+ | ||
|ontology_enrichment_celltype=CL:0000359!9.59e-28!32;CL:0000192!2.67e-24!42;CL:0000514!2.67e-24!42;CL:0000055!5.58e-22!180;CL:0000187!4.86e-21!54;CL:0000183!9.47e-20!59;CL:0000680!2.01e-19!57;CL:0000056!2.01e-19!57;CL:0000355!2.01e-19!57;CL:0000393!5.65e-18!60;CL:0000211!5.65e-18!60;CL:0000222!1.23e-15!119;CL:0002539!9.32e-14!10;CL:0002371!2.49e-12!591;CL:0000220!1.24e-11!246;CL:0002321!2.10e-11!248;CL:0000057!2.79e-11!75;CL:0002139!9.04e-11!24;CL:0000144!5.16e-10!625;CL:0000548!1.76e-09!679;CL:0000004!1.76e-09!679;CL:0000255!1.76e-09!679;CL:0000071!1.89e-09!18;CL:0002546!1.89e-09!18;CL:0000012!2.67e-09!682;CL:0000048!5.62e-09!430;CL:0000723!1.49e-08!436;CL:0002620!4.82e-08!23;CL:0000034!5.19e-08!444;CL:1000306!5.78e-08!4;CL:0002547!5.78e-08!4;CL:0002594!6.30e-08!4;CL:0002494!1.20e-07!16;CL:0000003!4.88e-07!722;CL:0002592!8.30e-07!3 | |ontology_enrichment_celltype=CL:0000359!9.59e-28!32;CL:0000192!2.67e-24!42;CL:0000514!2.67e-24!42;CL:0000055!5.58e-22!180;CL:0000187!4.86e-21!54;CL:0000183!9.47e-20!59;CL:0000680!2.01e-19!57;CL:0000056!2.01e-19!57;CL:0000355!2.01e-19!57;CL:0000393!5.65e-18!60;CL:0000211!5.65e-18!60;CL:0000222!1.23e-15!119;CL:0002539!9.32e-14!10;CL:0002371!2.49e-12!591;CL:0000220!1.24e-11!246;CL:0002321!2.10e-11!248;CL:0000057!2.79e-11!75;CL:0002139!9.04e-11!24;CL:0000144!5.16e-10!625;CL:0000548!1.76e-09!679;CL:0000004!1.76e-09!679;CL:0000255!1.76e-09!679;CL:0000071!1.89e-09!18;CL:0002546!1.89e-09!18;CL:0000012!2.67e-09!682;CL:0000048!5.62e-09!430;CL:0000723!1.49e-08!436;CL:0002620!4.82e-08!23;CL:0000034!5.19e-08!444;CL:1000306!5.78e-08!4;CL:0002547!5.78e-08!4;CL:0002594!6.30e-08!4;CL:0002494!1.20e-07!16;CL:0000003!4.88e-07!722;CL:0002592!8.30e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.32e-45;32!CL:0000192;3.23e-24;43!CL:0002539;7.59e-21;10!CL:0002594;6.30e-14;4!CL:1000306;1.18e-13;4!CL:0002547;1.18e-13;4!CL:0002595;1.02e-11;5!CL:0002592;1.08e-11;3!CL:0000187;1.93e-11;55!CL:0002494;9.45e-10;16!CL:0000393;1.12e-09;61!CL:0000211;1.12e-09;61!CL:0002139;1.35e-09;24!CL:0002544;3.48e-09;6!CL:0000569;2.09e-08;4!CL:0002593;2.69e-08;2!CL:0000071;3.12e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.46e-47,32;CL:0000192,1.48e-33,43;CL:0000514,1.48e-33,43;CL:0000187,6.34e-25,55;CL:0000680,2.50e-23,58;CL:0000056,2.50e-23,58;CL:0000355,2.50e-23,58;CL:0000393,6.87e-22,61;CL:0000211,6.87e-22,61;CL:0002539,6.86e-21,10;CL:0000222,3.13e-19,121;CL:1000306,6.76e-14,4;CL:0002547,6.76e-14,4;CL:0002594,7.98e-14,4;CL:0002595,9.97e-12,5;CL:0002592,1.12e-11,3;CL:0002321,7.55e-11,250;CL:0002494,9.35e-10,16;CL:0002139,1.32e-09,24;CL:0002544,3.17e-09,6;CL:0002593,2.55e-08,2;CL:0000569,2.55e-08,4;CL:0000011,2.55e-08,4;CL:0000071,2.88e-08,18;CL:0002546,2.88e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000514;3.23e-24;43!CL:0000355;3.80e-11;58!CL:0000011;2.09e-08;4!CL:0002546;3.12e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.02e-44!42;UBERON:0003509!1.02e-44!42;UBERON:0004572!1.02e-44!42;UBERON:0001981!8.62e-40!60;UBERON:0007500!8.62e-40!60;UBERON:0004537!8.62e-40!60;UBERON:0006965!8.62e-40!60;UBERON:0000055!1.45e-38!69;UBERON:0004573!7.68e-35!33;UBERON:0004571!7.68e-35!33;UBERON:0004872!2.76e-34!84;UBERON:0002049!8.65e-32!79;UBERON:0007798!8.65e-32!79;UBERON:0004535!2.03e-26!110;UBERON:0001009!2.72e-25!113;UBERON:0003914!2.58e-23!118;UBERON:0000947!1.03e-21!21;UBERON:0010191!1.03e-21!21;UBERON:0004290!1.64e-20!70;UBERON:0000914!3.28e-19!83;UBERON:0002329!3.28e-19!83;UBERON:0003077!3.28e-19!83;UBERON:0003059!3.28e-19!83;UBERON:0007282!3.28e-19!83;UBERON:0009618!3.28e-19!83;UBERON:0007285!3.28e-19!83;UBERON:0000486!2.74e-18!82;UBERON:0001134!1.59e-17!61;UBERON:0002036!1.59e-17!61;UBERON:0003082!1.59e-17!61;UBERON:0000490!2.50e-17!138;UBERON:0002385!1.14e-16!63;UBERON:0001015!1.14e-16!63;UBERON:0000383!1.14e-16!63;UBERON:0004237!9.32e-14!10;UBERON:0004695!9.32e-14!10;UBERON:0002111!9.32e-14!10;UBERON:0004178!9.32e-14!10;UBERON:0004111!1.73e-10!241;UBERON:0001135!3.79e-10!15;UBERON:0005256!1.40e-09!143;UBERON:0001986!1.89e-09!18;UBERON:0004638!1.89e-09!18;UBERON:0004852!1.89e-09!18;UBERON:0003498!2.61e-09!5;UBERON:0005985!2.61e-09!5;UBERON:0000025!5.41e-09!194;UBERON:0000467!5.86e-09!625;UBERON:0000480!6.75e-09!626;UBERON:0000483!1.20e-08!309;UBERON:0000487!1.26e-08!22;UBERON:0000119!2.11e-08!312;UBERON:0000477!2.44e-08!286;UBERON:0003081!3.10e-08!216;UBERON:0000415!5.78e-08!4;UBERON:0007240!5.78e-08!4;UBERON:0005742!5.78e-08!4;UBERON:0005734!5.78e-08!4;UBERON:0004664!5.78e-08!4;UBERON:0004663!5.78e-08!4;UBERON:0001310!6.30e-08!4;UBERON:0000468!1.94e-07!659;UBERON:0000926!2.93e-07!448;UBERON:0004120!2.93e-07!448;UBERON:0006603!2.93e-07!448;UBERON:0006914!3.12e-07!25;UBERON:0003102!6.16e-07!95;UBERON:0001621!8.30e-07!3 | |ontology_enrichment_uberon=UBERON:0001637!1.02e-44!42;UBERON:0003509!1.02e-44!42;UBERON:0004572!1.02e-44!42;UBERON:0001981!8.62e-40!60;UBERON:0007500!8.62e-40!60;UBERON:0004537!8.62e-40!60;UBERON:0006965!8.62e-40!60;UBERON:0000055!1.45e-38!69;UBERON:0004573!7.68e-35!33;UBERON:0004571!7.68e-35!33;UBERON:0004872!2.76e-34!84;UBERON:0002049!8.65e-32!79;UBERON:0007798!8.65e-32!79;UBERON:0004535!2.03e-26!110;UBERON:0001009!2.72e-25!113;UBERON:0003914!2.58e-23!118;UBERON:0000947!1.03e-21!21;UBERON:0010191!1.03e-21!21;UBERON:0004290!1.64e-20!70;UBERON:0000914!3.28e-19!83;UBERON:0002329!3.28e-19!83;UBERON:0003077!3.28e-19!83;UBERON:0003059!3.28e-19!83;UBERON:0007282!3.28e-19!83;UBERON:0009618!3.28e-19!83;UBERON:0007285!3.28e-19!83;UBERON:0000486!2.74e-18!82;UBERON:0001134!1.59e-17!61;UBERON:0002036!1.59e-17!61;UBERON:0003082!1.59e-17!61;UBERON:0000490!2.50e-17!138;UBERON:0002385!1.14e-16!63;UBERON:0001015!1.14e-16!63;UBERON:0000383!1.14e-16!63;UBERON:0004237!9.32e-14!10;UBERON:0004695!9.32e-14!10;UBERON:0002111!9.32e-14!10;UBERON:0004178!9.32e-14!10;UBERON:0004111!1.73e-10!241;UBERON:0001135!3.79e-10!15;UBERON:0005256!1.40e-09!143;UBERON:0001986!1.89e-09!18;UBERON:0004638!1.89e-09!18;UBERON:0004852!1.89e-09!18;UBERON:0003498!2.61e-09!5;UBERON:0005985!2.61e-09!5;UBERON:0000025!5.41e-09!194;UBERON:0000467!5.86e-09!625;UBERON:0000480!6.75e-09!626;UBERON:0000483!1.20e-08!309;UBERON:0000487!1.26e-08!22;UBERON:0000119!2.11e-08!312;UBERON:0000477!2.44e-08!286;UBERON:0003081!3.10e-08!216;UBERON:0000415!5.78e-08!4;UBERON:0007240!5.78e-08!4;UBERON:0005742!5.78e-08!4;UBERON:0005734!5.78e-08!4;UBERON:0004664!5.78e-08!4;UBERON:0004663!5.78e-08!4;UBERON:0001310!6.30e-08!4;UBERON:0000468!1.94e-07!659;UBERON:0000926!2.93e-07!448;UBERON:0004120!2.93e-07!448;UBERON:0006603!2.93e-07!448;UBERON:0006914!3.12e-07!25;UBERON:0003102!6.16e-07!95;UBERON:0001621!8.30e-07!3 | ||
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|short_description=p@chr11:102668178..102668206,+ | |short_description=p@chr11:102668178..102668206,+ | ||
}} | }} |
Latest revision as of 17:31, 23 July 2015
Short description: | p@chr11:102668178..102668206, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102668178..102668206, + |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.46e-47 | 32 |
smooth muscle cell | 1.48e-33 | 43 |
smooth muscle myoblast | 1.48e-33 | 43 |
muscle cell | 6.34e-25 | 55 |
muscle precursor cell | 2.50e-23 | 58 |
myoblast | 2.50e-23 | 58 |
multi-potent skeletal muscle stem cell | 2.50e-23 | 58 |
electrically responsive cell | 6.87e-22 | 61 |
electrically active cell | 6.87e-22 | 61 |
aortic smooth muscle cell | 6.86e-21 | 10 |
mesodermal cell | 3.13e-19 | 121 |
fibroblast of tunica adventitia of artery | 6.76e-14 | 4 |
fibroblast of the aortic adventitia | 6.76e-14 | 4 |
smooth muscle cell of the umbilical artery | 7.98e-14 | 4 |
smooth muscle cell of the subclavian artery | 9.97e-12 | 5 |
smooth muscle cell of the coronary artery | 1.12e-11 | 3 |
embryonic cell | 7.55e-11 | 250 |
cardiocyte | 9.35e-10 | 16 |
endothelial cell of vascular tree | 1.32e-09 | 24 |
aortic endothelial cell | 3.17e-09 | 6 |
smooth muscle cell of the internal thoracic artery | 2.55e-08 | 2 |
cardiac mesenchymal cell | 2.55e-08 | 4 |
migratory trunk neural crest cell | 2.55e-08 | 4 |
blood vessel endothelial cell | 2.88e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.88e-08 | 18 |