FFCP PHASE1:Hg19::chr11:117708815..117708831,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:117708815..117708831,+ to FFCP PHASE1:Hg19::chr11:117708815..117708831,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:117708815..117708831,+ | |||
|description=CAGE_peak_at_chr11:117708815..117708831,+ | |||
|id=chr11:117708815..117708831,+ | |||
|ontology_enrichment_celltype=CL:0000128!2.71e-07!7;CL:0000126!2.71e-07!7;CL:0000127!2.71e-07!7;CL:0002453!2.71e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.06e-10;6!CL:0000404;1.06e-10;6!CL:0002605;8.95e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.46e-11,6;CL:0000031,6.46e-11,6;CL:0000404,6.46e-11,6;CL:0002605,8.97e-10,3;CL:0000047,2.66e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.06e-10;6!UBERON:0010227;5.97e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.18e-35!86;UBERON:0001049!2.70e-35!57;UBERON:0005068!2.70e-35!57;UBERON:0006241!2.70e-35!57;UBERON:0007135!2.70e-35!57;UBERON:0000073!3.37e-35!94;UBERON:0001016!3.37e-35!94;UBERON:0001017!1.24e-34!82;UBERON:0007023!1.15e-32!115;UBERON:0002346!1.36e-29!90;UBERON:0003075!6.52e-29!86;UBERON:0007284!6.52e-29!86;UBERON:0002616!3.00e-28!59;UBERON:0000955!1.02e-27!69;UBERON:0006238!1.02e-27!69;UBERON:0001893!1.39e-24!34;UBERON:0002020!5.47e-24!34;UBERON:0003528!5.47e-24!34;UBERON:0002780!5.51e-24!41;UBERON:0001890!5.51e-24!41;UBERON:0006240!5.51e-24!41;UBERON:0002791!2.98e-23!33;UBERON:0003080!3.42e-23!42;UBERON:0001869!2.21e-22!32;UBERON:0000956!5.02e-21!25;UBERON:0000203!5.02e-21!25;UBERON:0003056!2.96e-19!61;UBERON:0000924!3.69e-18!173;UBERON:0006601!3.69e-18!173;UBERON:0000153!1.84e-17!129;UBERON:0007811!1.84e-17!129;UBERON:0004121!2.08e-17!169;UBERON:0002619!2.25e-17!22;UBERON:0000033!1.76e-16!123;UBERON:0001950!2.30e-15!20;UBERON:0003076!2.01e-13!15;UBERON:0003057!2.01e-13!15;UBERON:0000922!1.25e-12!612;UBERON:0000062!1.32e-10!511;UBERON:0002050!2.42e-10!605;UBERON:0005423!2.42e-10!605;UBERON:0004733!3.54e-10!12;UBERON:0002028!3.54e-10!12;UBERON:0007277!3.54e-10!12;UBERON:0000923!6.90e-10!604;UBERON:0005291!6.90e-10!604;UBERON:0006598!6.90e-10!604;UBERON:0002532!6.90e-10!604;UBERON:0000468!1.11e-09!659;UBERON:0004732!3.31e-09!13;UBERON:0000025!3.71e-09!194;UBERON:0002680!4.20e-09!9;UBERON:0001895!4.20e-09!9;UBERON:0010092!4.20e-09!9;UBERON:0000467!5.01e-08!625;UBERON:0001872!5.42e-08!5;UBERON:0000480!5.82e-08!626;UBERON:0000064!7.64e-08!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.20e-15;25!UBERON:0000203;1.20e-15;25!UBERON:0001869;8.16e-14;32!UBERON:0001893;8.33e-14;34!UBERON:0001950;2.52e-11;20!UBERON:0002791;2.82e-11;32!UBERON:0003528;5.18e-11;34!UBERON:0002020;5.18e-11;34!UBERON:0002619;2.71e-10;22!UBERON:0002780;2.26e-09;41!UBERON:0001890;2.26e-09;41!UBERON:0002581;2.19e-08;1!UBERON:0002022;2.19e-08;1!UBERON:0002079;5.97e-08;1!UBERON:0007190;5.97e-08;1!UBERON:0001016;1.02e-07;83!UBERON:0000955;1.50e-07;68!UBERON:0000073;3.31e-07;53!UBERON:0002616;3.31e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.14e-20,89;UBERON:0001017,8.01e-18,81;UBERON:0000956,1.30e-15,25;UBERON:0000203,1.30e-15,25;UBERON:0001869,3.22e-15,32;UBERON:0001893,2.88e-14,34;UBERON:0001049,1.89e-12,56;UBERON:0005068,1.89e-12,56;UBERON:0006241,1.89e-12,56;UBERON:0007135,1.89e-12,56;UBERON:0002791,4.66e-12,32;UBERON:0000955,9.31e-12,68;UBERON:0006238,9.31e-12,68;UBERON:0002780,1.19e-11,41;UBERON:0001890,1.19e-11,41;UBERON:0003080,1.19e-11,41;UBERON:0006240,1.19e-11,41;UBERON:0003528,2.65e-11,34;UBERON:0002020,2.65e-11,34;UBERON:0001950,2.72e-11,20;UBERON:0000073,6.91e-11,53;UBERON:0002616,6.91e-11,53;UBERON:0002619,2.91e-10,22;UBERON:0004121,4.36e-09,171;UBERON:0000924,4.36e-09,171;UBERON:0006601,4.36e-09,171;UBERON:0007023,9.47e-09,114;UBERON:0002022,2.52e-08,1;UBERON:0002581,2.71e-08,1;UBERON:0007190,5.05e-08,1;UBERON:0011216,5.07e-08,223;UBERON:0002079,5.40e-08,1;UBERON:0003075,6.19e-08,82;UBERON:0007284,6.19e-08,82;UBERON:0002346,1.76e-07,86;UBERON:0003056,1.96e-07,61 | |||
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| ||
|short_description=p@chr11:117708815..117708831,+ | |||
}} | }} |
Latest revision as of 18:38, 23 July 2015
Short description: | p@chr11:117708815..117708831, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:117708815..117708831, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.46e-11 | 6 |
neuroblast | 6.46e-11 | 6 |
electrically signaling cell | 6.46e-11 | 6 |
astrocyte of the cerebral cortex | 8.97e-10 | 3 |
neuronal stem cell | 2.66e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.14e-20 | 89 |
central nervous system | 8.01e-18 | 81 |
cerebral cortex | 1.30e-15 | 25 |
pallium | 1.30e-15 | 25 |
cerebral hemisphere | 3.22e-15 | 32 |
telencephalon | 2.88e-14 | 34 |
neural tube | 1.89e-12 | 56 |
neural rod | 1.89e-12 | 56 |
future spinal cord | 1.89e-12 | 56 |
neural keel | 1.89e-12 | 56 |
regional part of telencephalon | 4.66e-12 | 32 |
brain | 9.31e-12 | 68 |
future brain | 9.31e-12 | 68 |
regional part of forebrain | 1.19e-11 | 41 |
forebrain | 1.19e-11 | 41 |
anterior neural tube | 1.19e-11 | 41 |
future forebrain | 1.19e-11 | 41 |
brain grey matter | 2.65e-11 | 34 |
gray matter | 2.65e-11 | 34 |
neocortex | 2.72e-11 | 20 |
regional part of nervous system | 6.91e-11 | 53 |
regional part of brain | 6.91e-11 | 53 |
regional part of cerebral cortex | 2.91e-10 | 22 |
ectoderm-derived structure | 4.36e-09 | 171 |
ectoderm | 4.36e-09 | 171 |
presumptive ectoderm | 4.36e-09 | 171 |
adult organism | 9.47e-09 | 114 |
insula | 2.52e-08 | 1 |
postcentral gyrus | 2.71e-08 | 1 |
paracentral gyrus | 5.05e-08 | 1 |
organ system subdivision | 5.07e-08 | 223 |
left cardiac atrium | 5.40e-08 | 1 |
neural plate | 6.19e-08 | 82 |
presumptive neural plate | 6.19e-08 | 82 |
neurectoderm | 1.76e-07 | 86 |
pre-chordal neural plate | 1.96e-07 | 61 |