FFCP PHASE1:Hg19::chr12:52910482..52910540,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:52910482..52910540,- to FFCP PHASE1:Hg19::chr12:52910482..52910540,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_S90014_5end | |||
|cluster_id=chr12:52910482..52910540,- | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_2_at_S90014_5end | |||
|id=chr12:52910482..52910540,- | |||
|ontology_enrichment_celltype=CL:0002076!4.40e-28!43;CL:0000223!2.56e-18!59;CL:0000066!1.66e-17!254;CL:0002251!5.38e-17!21;CL:0002159!1.23e-16!13;CL:0002368!2.98e-16!13;CL:0000622!7.65e-12!5;CL:0000076!8.35e-11!62;CL:0000154!8.97e-10!6;CL:0000244!1.25e-09!4;CL:0000731!1.25e-09!4;CL:0002202!4.59e-09!9;CL:0002632!4.59e-09!9;CL:0002077!1.12e-08!33;CL:0002328!5.22e-08!3;CL:0002623!8.92e-08!3;CL:0000068!9.33e-08!3;CL:0000069!9.33e-08!3;CL:0000307!9.33e-08!3;CL:0000377!9.33e-08!3;CL:0002166!1.88e-07!3;CL:0002621!1.92e-07!3;CL:0000362!2.02e-07!8;CL:0000349!4.99e-07!3;CL:0002577!4.99e-07!3;CL:0000240!9.04e-07!6;CL:0000311!9.04e-07!6;CL:0000079!9.04e-07!6;CL:0000237!9.04e-07!6;CL:0000036!9.04e-07!6;CL:0000357!9.04e-07!6;CL:0000114!9.04e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.12e-25;42!CL:0002368;1.29e-23;13!CL:0002159;2.21e-22;14!CL:0000622;1.16e-16;5!CL:0002251;2.06e-14;20!CL:0000154;8.00e-14;6!CL:0000244;1.78e-13;4!CL:0000731;1.78e-13;4!CL:0002202;4.90e-13;9!CL:0002632;4.90e-13;9!CL:0002328;5.15e-11;3!CL:0002623;1.02e-10;3!CL:0000307;1.19e-10;3!CL:0002166;2.91e-10;3!CL:0002621;3.80e-10;3!CL:0002077;5.39e-10;34!CL:0002577;1.31e-09;3!CL:0000240;1.49e-09;6!CL:0000311;1.49e-09;6!CL:0000079;1.49e-09;6!CL:0000237;1.49e-09;6!CL:0000362;2.24e-09;9!CL:0000150;4.38e-09;9!CL:0000349;1.12e-08;19!CL:0000575;3.28e-08;2!CL:0000317;1.20e-07;2!CL:1000448;1.20e-07;2!CL:0002308;1.20e-07;2!CL:0002140;1.20e-07;2!CL:0002327;1.43e-07;4!CL:0000312;6.84e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.32e-32,42;CL:0002368,1.15e-23,13;CL:0000066,2.32e-23,253;CL:0002159,2.40e-22,14;CL:0000223,1.39e-21,58;CL:0000622,1.22e-16,5;CL:0002251,2.00e-14,20;CL:0000154,8.33e-14,6;CL:0000244,2.16e-13,4;CL:0000731,2.16e-13,4;CL:0002202,4.85e-13,9;CL:0002632,4.85e-13,9;CL:0002077,2.00e-11,34;CL:0002328,5.07e-11,3;CL:0002623,1.11e-10,3;CL:0000068,1.19e-10,3;CL:0000069,1.19e-10,3;CL:0000307,1.19e-10,3;CL:0000377,1.19e-10,3;CL:0002166,3.30e-10,3;CL:0002621,3.41e-10,3;CL:0002577,1.37e-09,3;CL:0000240,1.55e-09,6;CL:0000311,1.55e-09,6;CL:0000079,1.55e-09,6;CL:0000237,1.55e-09,6;CL:0000036,1.55e-09,6;CL:0000357,1.55e-09,6;CL:0000114,1.55e-09,6;CL:0000362,2.22e-09,9;CL:0000150,4.50e-09,9;CL:0000076,4.50e-09,63;CL:0000349,1.21e-08,19;CL:0000575,3.28e-08,2;CL:0000317,1.17e-07,2;CL:1000448,1.17e-07,2;CL:0002308,1.17e-07,2;CL:0002140,1.17e-07,2;CL:0002327,1.43e-07,4;CL:0002321,3.92e-07,250;CL:0000312,6.91e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;6.04e-12;58!CL:0000377;1.19e-10;3!CL:0000357;1.49e-09;6!CL:0000114;1.49e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!4.00e-18!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.31e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.28e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!7.04e-15!35;UBERON:0000166!1.69e-14!21;UBERON:0001004!1.86e-14!72;UBERON:0004119!4.28e-13!169;UBERON:0000925!4.28e-13!169;UBERON:0006595!4.28e-13!169;UBERON:0000165!6.47e-12!28;UBERON:0000930!6.47e-12!28;UBERON:0000974!1.51e-11!10;UBERON:0003102!3.03e-11!95;UBERON:0000365!4.19e-11!5;UBERON:0003729!1.46e-10!5;UBERON:0005910!3.61e-09!6;UBERON:0003343!1.73e-08!4;UBERON:0004785!1.73e-08!4;UBERON:0000065!1.74e-08!53;UBERON:0005631!2.63e-08!14;UBERON:0000158!2.63e-08!14;UBERON:0004815!5.22e-08!3;UBERON:0002031!5.22e-08!3;UBERON:0006562!8.06e-08!11;UBERON:0001444!9.16e-08!48;UBERON:0000344!1.72e-07!12;UBERON:0001949!1.92e-07!3;UBERON:0007196!3.63e-07!14;UBERON:0001558!3.63e-07!14;UBERON:0001723!7.87e-07!3;UBERON:0001033!7.87e-07!3;UBERON:0010056!7.87e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.55e-12;12!UBERON:0004815;5.15e-11;3!UBERON:0002031;5.15e-11;3!UBERON:0000365;8.78e-11;5!UBERON:0001949;3.80e-10;3!UBERON:0000165;1.29e-09;28!UBERON:0000161;1.44e-09;19!UBERON:0000166;1.44e-09;19!UBERON:0005910;5.53e-09;6!UBERON:0000478;2.36e-08;24!UBERON:0003729;2.77e-08;13!UBERON:0001708;8.57e-08;4!UBERON:0008895;8.57e-08;4!UBERON:0002419;1.20e-07;2!UBERON:0007771;1.20e-07;2!UBERON:0003297;1.20e-07;2!UBERON:0001821;1.20e-07;2!UBERON:0003487;1.20e-07;2!UBERON:0001820;1.20e-07;2!UBERON:0001911;1.43e-07;4!UBERON:0007196;1.64e-07;15!UBERON:0001558;1.64e-07;15!UBERON:0001003;1.70e-07;15!UBERON:0007376;1.70e-07;15!UBERON:0001987;2.61e-07;4!UBERON:0005631;4.11e-07;10!UBERON:0000158;4.11e-07;10!UBERON:0010371;6.29e-07;31!UBERON:0000305;6.62e-07;7!UBERON:0002185;9.68e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.28e-13,99;UBERON:0005631,3.48e-12,14;UBERON:0000158,3.48e-12,14;UBERON:0004119,2.35e-11,160;UBERON:0000925,2.35e-11,160;UBERON:0006595,2.35e-11,160;UBERON:0001004,4.32e-11,74;UBERON:0004815,5.07e-11,3;UBERON:0002031,5.07e-11,3;UBERON:0000365,1.02e-10,5;UBERON:0000166,2.76e-10,22;UBERON:0001949,3.41e-10,3;UBERON:0000033,1.58e-09,56;UBERON:0000153,1.65e-09,62;UBERON:0007811,1.65e-09,62;UBERON:0000165,3.20e-09,29;UBERON:0000930,3.20e-09,29;UBERON:0005910,6.26e-09,6;UBERON:0000161,1.65e-08,36;UBERON:0000478,2.50e-08,24;UBERON:0003729,2.61e-08,13;UBERON:0001708,9.41e-08,4;UBERON:0008895,9.41e-08,4;UBERON:0002419,1.17e-07,2;UBERON:0007771,1.17e-07,2;UBERON:0003297,1.17e-07,2;UBERON:0001821,1.17e-07,2;UBERON:0003487,1.17e-07,2;UBERON:0001820,1.17e-07,2;UBERON:0005089,1.17e-07,2;UBERON:0005088,1.17e-07,2;UBERON:0001911,1.43e-07,4;UBERON:0005333,1.43e-07,4;UBERON:0008425,1.43e-07,4;UBERON:0005311,1.43e-07,4;UBERON:0007196,1.63e-07,15;UBERON:0001558,1.63e-07,15;UBERON:0001003,1.65e-07,15;UBERON:0007376,1.65e-07,15;UBERON:0007383,1.65e-07,15;UBERON:0001987,2.70e-07,4;UBERON:0004340,2.70e-07,4;UBERON:0001444,4.79e-07,49;UBERON:0003124,6.41e-07,7;UBERON:0000305,7.31e-07,7;UBERON:0002185,9.59e-07,5 | |||
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| ||
|short_description=p2@S90014 | |||
}} | }} |
Latest revision as of 09:36, 24 July 2015
Short description: | p2@S90014 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_S90014_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | -21bp_to_S90014_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.28e-09 | 14 |