FFCP PHASE1:Hg19::chr16:2141414..2141444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:2141414..2141444,+ | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_at_chr16:2141414..2141444,+ | |description=CAGE_peak_at_chr16:2141414..2141444,+ | ||
|id=chr16:2141414..2141444,+ | |id=chr16:2141414..2141444,+ | ||
|ontology_enrichment_celltype=CL:1000449!5.96e-12!16;CL:0000066!1.50e-10!254;CL:1000497!3.66e-10!18;CL:0002518!3.66e-10!18;CL:1000507!1.36e-09!12;CL:1000494!1.36e-09!12;CL:0002681!8.17e-09!13;CL:0002584!8.17e-09!13;CL:1000612!3.54e-07!7;CL:1000746!3.54e-07!7 | |ontology_enrichment_celltype=CL:1000449!5.96e-12!16;CL:0000066!1.50e-10!254;CL:1000497!3.66e-10!18;CL:0002518!3.66e-10!18;CL:1000507!1.36e-09!12;CL:1000494!1.36e-09!12;CL:0002681!8.17e-09!13;CL:0002584!8.17e-09!13;CL:1000612!3.54e-07!7;CL:1000746!3.54e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.48e-23;15!CL:1000497;2.14e-20;17!CL:0002518;2.14e-20;17!CL:0002681;5.04e-18;12!CL:0002584;5.04e-18;12!CL:1000746;1.67e-16;7!CL:1000612;1.67e-16;7!CL:1000507;2.73e-16;10!CL:1000494;2.73e-16;10!CL:0000650;8.26e-11;2!CL:1000500;8.26e-11;2!CL:1000618;8.26e-11;2!CL:1001318;8.26e-11;2!CL:0002173;8.26e-11;2!CL:0002188;1.11e-08;5!CL:0000322;5.15e-07;3!CL:0002178;5.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.18e-23,15;CL:1000497,1.92e-20,17;CL:0002518,1.92e-20,17;CL:0002681,4.56e-18,12;CL:0002584,4.56e-18,12;CL:1000746,1.73e-16,7;CL:1000612,1.73e-16,7;CL:1000507,2.33e-16,10;CL:1000494,2.33e-16,10;CL:0000650,8.28e-11,2;CL:1000500,8.28e-11,2;CL:1000618,8.28e-11,2;CL:1001318,8.28e-11,2;CL:0002173,8.28e-11,2;CL:0000066,2.55e-10,253;CL:0002188,1.14e-08,5;CL:0002178,3.81e-07,3;CL:0000322,5.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.02e-07;10!UBERON:0005564;2.02e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:299;7.61e-11;25!DOID:3493;2.92e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,6.70e-11,25;DOID:3493,1.93e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000058!5.24e-16!26;UBERON:0000080!1.56e-13!18;UBERON:0002120!1.56e-13!18;UBERON:0004875!1.56e-13!18;UBERON:0005721!1.56e-13!18;UBERON:0005754!1.56e-13!18;UBERON:0007297!1.56e-13!18;UBERON:0006555!1.60e-12!17;UBERON:0005103!1.60e-12!17;UBERON:0000083!1.60e-12!17;UBERON:0009201!1.60e-12!17;UBERON:0004819!1.60e-12!17;UBERON:0006553!1.60e-12!17;UBERON:0003074!1.60e-12!17;UBERON:0003060!1.60e-12!17;UBERON:0003887!3.60e-12!21;UBERON:0004211!5.96e-12!16;UBERON:0001285!5.96e-12!16;UBERON:0007684!5.96e-12!16;UBERON:0003220!5.96e-12!16;UBERON:0004208!5.96e-12!16;UBERON:0004876!1.09e-11!20;UBERON:0000464!1.22e-11!104;UBERON:0000466!2.59e-11!126;UBERON:0000481!1.66e-10!347;UBERON:0002113!1.33e-09!27;UBERON:0003918!1.33e-09!27;UBERON:0005095!1.33e-09!27;UBERON:0007687!1.33e-09!27;UBERON:0009773!1.36e-09!12;UBERON:0001231!1.36e-09!12;UBERON:0004810!1.36e-09!12;UBERON:0004119!3.75e-09!169;UBERON:0000925!3.75e-09!169;UBERON:0006595!3.75e-09!169;UBERON:0005409!5.82e-09!35;UBERON:0001225!8.17e-09!13;UBERON:0008987!8.17e-09!13;UBERON:0001007!9.34e-09!155;UBERON:0001555!9.34e-09!155;UBERON:0007026!9.34e-09!155;UBERON:0005177!1.63e-08!107;UBERON:0000064!2.39e-08!219;UBERON:0004921!2.43e-08!129;UBERON:0004185!2.43e-08!129;UBERON:0000489!3.38e-08!32;UBERON:0000059!3.56e-08!11;UBERON:0003104!5.47e-08!238;UBERON:0009142!5.47e-08!238;UBERON:0000160!7.62e-08!27;UBERON:0000119!9.64e-08!312;UBERON:0002553!1.06e-07!70;UBERON:0000483!3.13e-07!309;UBERON:0000074!3.54e-07!7;UBERON:0001229!3.54e-07!7;UBERON:0001230!3.54e-07!7;UBERON:0005749!3.54e-07!7;UBERON:0004199!3.54e-07!7;UBERON:0004209!3.54e-07!7;UBERON:0004198!3.54e-07!7;UBERON:0003586!4.02e-07!5;UBERON:0003886!4.28e-07!63;UBERON:0000922!5.74e-07!612;UBERON:0006554!6.23e-07!44;UBERON:0000063!8.08e-07!97 | |ontology_enrichment_uberon=UBERON:0000058!5.24e-16!26;UBERON:0000080!1.56e-13!18;UBERON:0002120!1.56e-13!18;UBERON:0004875!1.56e-13!18;UBERON:0005721!1.56e-13!18;UBERON:0005754!1.56e-13!18;UBERON:0007297!1.56e-13!18;UBERON:0006555!1.60e-12!17;UBERON:0005103!1.60e-12!17;UBERON:0000083!1.60e-12!17;UBERON:0009201!1.60e-12!17;UBERON:0004819!1.60e-12!17;UBERON:0006553!1.60e-12!17;UBERON:0003074!1.60e-12!17;UBERON:0003060!1.60e-12!17;UBERON:0003887!3.60e-12!21;UBERON:0004211!5.96e-12!16;UBERON:0001285!5.96e-12!16;UBERON:0007684!5.96e-12!16;UBERON:0003220!5.96e-12!16;UBERON:0004208!5.96e-12!16;UBERON:0004876!1.09e-11!20;UBERON:0000464!1.22e-11!104;UBERON:0000466!2.59e-11!126;UBERON:0000481!1.66e-10!347;UBERON:0002113!1.33e-09!27;UBERON:0003918!1.33e-09!27;UBERON:0005095!1.33e-09!27;UBERON:0007687!1.33e-09!27;UBERON:0009773!1.36e-09!12;UBERON:0001231!1.36e-09!12;UBERON:0004810!1.36e-09!12;UBERON:0004119!3.75e-09!169;UBERON:0000925!3.75e-09!169;UBERON:0006595!3.75e-09!169;UBERON:0005409!5.82e-09!35;UBERON:0001225!8.17e-09!13;UBERON:0008987!8.17e-09!13;UBERON:0001007!9.34e-09!155;UBERON:0001555!9.34e-09!155;UBERON:0007026!9.34e-09!155;UBERON:0005177!1.63e-08!107;UBERON:0000064!2.39e-08!219;UBERON:0004921!2.43e-08!129;UBERON:0004185!2.43e-08!129;UBERON:0000489!3.38e-08!32;UBERON:0000059!3.56e-08!11;UBERON:0003104!5.47e-08!238;UBERON:0009142!5.47e-08!238;UBERON:0000160!7.62e-08!27;UBERON:0000119!9.64e-08!312;UBERON:0002553!1.06e-07!70;UBERON:0000483!3.13e-07!309;UBERON:0000074!3.54e-07!7;UBERON:0001229!3.54e-07!7;UBERON:0001230!3.54e-07!7;UBERON:0005749!3.54e-07!7;UBERON:0004199!3.54e-07!7;UBERON:0004209!3.54e-07!7;UBERON:0004198!3.54e-07!7;UBERON:0003586!4.02e-07!5;UBERON:0003886!4.28e-07!63;UBERON:0000922!5.74e-07!612;UBERON:0006554!6.23e-07!44;UBERON:0000063!8.08e-07!97 | ||
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|short_description=p@chr16:2141414..2141444,+ | |short_description=p@chr16:2141414..2141444,+ | ||
}} | }} |
Latest revision as of 07:05, 25 July 2015
Short description: | p@chr16:2141414..2141444, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2141414..2141444, + |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.18e-23 | 15 |
kidney cell | 1.92e-20 | 17 |
kidney epithelial cell | 1.92e-20 | 17 |
kidney cortical cell | 4.56e-18 | 12 |
renal cortical epithelial cell | 4.56e-18 | 12 |
glomerular cell | 1.73e-16 | 7 |
kidney corpuscule cell | 1.73e-16 | 7 |
kidney tubule cell | 2.33e-16 | 10 |
nephron tubule epithelial cell | 2.33e-16 | 10 |
mesangial cell | 8.28e-11 | 2 |
kidney interstitial cell | 8.28e-11 | 2 |
juxtaglomerular complex cell | 8.28e-11 | 2 |
renal interstitial pericyte | 8.28e-11 | 2 |
extraglomerular mesangial cell | 8.28e-11 | 2 |
epithelial cell | 2.55e-10 | 253 |
glomerular endothelial cell | 1.14e-08 | 5 |
epithelial cell of stomach | 3.81e-07 | 3 |
pneumocyte | 5.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 6.70e-11 | 25 |
signet ring cell adenocarcinoma | 1.93e-10 | 2 |